[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,887 items for (author: xia & ns)

EMDB-69516:
In-cell map of mitoribosome from T cells of middle-aged patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, San J

EMDB-69519:
Tomogram of mitochondria in T cell from middle-aged patients after restimulation
Method: electron tomography / : Zhang X, Sang J, Su L, Pan B

EMDB-69521:
Tomogram of mitochondria in T cell from older patients after restimulation
Method: electron tomography / : Zhang X, Sang J, Su L, Pan B

EMDB-69523:
In-cell map of mitoribosome from T cells of older patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, Sang J

EMDB-69526:
In-cell map of electron transport chain supercomplex from T cells of middle-aged patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, Sang J

EMDB-69528:
In-cell map of electron transport chain supercomplex from T cells of older patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, Sang J

EMDB-75346:
Membrane protein solubilization and structure determination using de novo-designed amphipathic proteins
Method: single particle / : Borst AJ, Weidle C

EMDB-75350:
WRAP-TP0698
Method: single particle / : Borst AJ

EMDB-76165:
Nipah virus fusion protein with 20G7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76168:
Nipah virus fusion protein ectodomain in complex with 8C7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76170:
Hendra virus fusion protein ectodomain in complex with 9A9 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

PDB-9nz0:
Cryo-EM structure of vaccine elicited antibody 22F5 bound to the post-fusion conformation of the LayV-F glycoprotein
Method: single particle / : Kumar U, May A, Acharya P

EMDB-63580:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63581:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63583:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-80947:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-26xh:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-9m1r:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1s:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1u:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-71969:
Cryo-EM structure of apo BAM from P. aeruginosa PAO1
Method: single particle / : Munder F, Venugopal H, Grinter R

EMDB-71970:
Cryo-EM structure of BAM from P. aeruginosa PAO1 in complex with Pyocin L1
Method: single particle / : Munder F, Venugopal H, Grinter R

EMDB-71971:
Cryo-EM structure of BAM from P. aeruginosa P28 in complex with Pyocin L2
Method: single particle / : Munder F, Grinter R

PDB-9pxg:
Cryo-EM structure of apo BAM from P. aeruginosa PAO1
Method: single particle / : Munder F, Venugopal H, Grinter R

PDB-9pxi:
Cryo-EM structure of BAM from P. aeruginosa PAO1 in complex with Pyocin L1
Method: single particle / : Munder F, Venugopal H, Grinter R

PDB-9pxj:
Cryo-EM structure of BAM from P. aeruginosa P28 in complex with Pyocin L2
Method: single particle / : Munder F, Grinter R

EMDB-73803:
Cryo-EM structure of human Wntless in complex with Wnt5a at 1:1 stoichiometry
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Wang Z, Salic A, Jiang J, Huang P

EMDB-73810:
Cryo-EM structure of human Wntless in its apo state
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73835:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Focused map A
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73836:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Focused map B
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73837:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Consensus map
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73838:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Composite map
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

PDB-9z4h:
Cryo-EM structure of human Wntless in complex with Wnt5a at 1:1 stoichiometry
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Wang Z, Salic A, Jiang J, Huang P

PDB-9z4o:
Cryo-EM structure of human Wntless in its apo state
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

PDB-9z67:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Composite map
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73168:
Structure of the T6SS effector protein PdpC
Method: single particle / : Liu X, Zhou ZH

EMDB-48715:
Cryo-EM map of vaccine elicited antibody 22F5 bound to post-fusion conformation of Langya virus F protein
Method: single particle / : Kumar U, Acharya P

EMDB-49948:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

PDB-9nz2:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

EMDB-64587:
Local refinement of Succinate bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-64588:
Local refinement of maleic acid bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-64589:
Local refinement of ITA bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-64590:
Local refinement of AKG bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9uxn:
Local refinement of Succinate bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9uxo:
Local refinement of maleic acid bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9uxp:
Local refinement of ITA bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9uxq:
Local refinement of AKG bound OXGR1
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-65364:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex bound to viral protein C
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65365:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65366:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex
Method: single particle / : Du T, Wang J, Wu S, Ru H

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more