[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 122 items for (author: vega & ie)

EMDB-54081:
GluA4 in complex with TARP-2, open state, map of LBD domain
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-54217:
GluA4 in complex with TARP-2, open state, map of TMD domain
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-54225:
GluA4 in complex with TARP-2, Resting I state, map of TMD domain
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-54237:
GluA4 in complex with TARP-2, Resting I state, map of LBD domain
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-54250:
GluA4, Resting state, map of LBD domain
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-52862:
GluA4 in complex with TARP-2, resting state, structure of N-terminal domain
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-53031:
GluA4 in complex with TARP-2, resting state I, structure of TMD/LBD
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-53285:
GluA4, resting state, structure of TMD/LBD
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-54065:
GluA4 in complex with TARP-2, Resting II state, structure of TMD/LBD domains
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-54069:
GluA4 in complex with TARP-2, open state, structure of TMD/LBD domains
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-54080:
GluA4 in complex with TARP-2, desensitized state, structure of TMD/LBD domains
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-54083:
GluA4 in complex with TARP-2, Desensitized state, structure of TMD domain
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-54092:
GluA4 in complex with TARP-2, Resting II state, structure of TMD domain
Method: single particle / : Vega-Gutierrez C, Herguedas B

PDB-9igz:
GluA4 in complex with TARP-2, resting state, structure of N-terminal domain
Method: single particle / : Vega-Gutierrez C, Herguedas B

PDB-9qdn:
GluA4 in complex with TARP-2, resting state I, structure of TMD/LBD
Method: single particle / : Vega-Gutierrez C, Herguedas B

PDB-9qpw:
GluA4, resting state, structure of TMD/LBD
Method: single particle / : Vega-Gutierrez C, Herguedas B

PDB-9rms:
GluA4 in complex with TARP-2, Resting II state, structure of TMD/LBD domains
Method: single particle / : Vega-Gutierrez C, Herguedas B

PDB-9rmw:
GluA4 in complex with TARP-2, open state, structure of TMD/LBD domains
Method: single particle / : Vega-Gutierrez C, Herguedas B

PDB-9rn4:
GluA4 in complex with TARP-2, desensitized state, structure of TMD/LBD domains
Method: single particle / : Vega-Gutierrez C, Herguedas B

PDB-9rn7:
GluA4 in complex with TARP-2, Desensitized state, structure of TMD domain
Method: single particle / : Vega-Gutierrez C, Herguedas B

PDB-9rnh:
GluA4 in complex with TARP-2, Resting II state, structure of TMD domain
Method: single particle / : Vega-Gutierrez C, Herguedas B

EMDB-52329:
The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3(R439G,R163I)- TARP gamma2 in the apo state.
Method: single particle / : Pokharna A, Krieger J, Greger I, Ho H, Yamashita K, Cais O

PDB-9hpg:
The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3(R439G,R163I)- TARP gamma2 in the apo state.
Method: single particle / : Pokharna A, Krieger J, Greger I

EMDB-52325:
The TMD and the LBD region of the AMPAR complex GluA3- TARP gamma2 in the apo state.
Method: single particle / : Pokharna A, Krieger J, Greger I, Ho H, Yamashita K, Cais O

EMDB-52326:
The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the open state.
Method: single particle / : Pokharna A, Krieger J, Greger I, Ho H, Yamashita K, Cais O

EMDB-52327:
The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the apo state.
Method: single particle / : Pokharna A, Krieger J, Greger I, Ho H, Yamashita K, Cais O, Singh B

EMDB-52328:
The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the desensitised state.
Method: single particle / : Pokharna A, Krieger J, Greger I, Ho H, Yamashita K, Cais O

EMDB-52332:
Open state TMD-LBD of the GluA3(R439G) with TARP gamma2
Method: single particle / : Pokharna A, Singh B, Krieger J

EMDB-53109:
The composite map of of the AMPAR complex GluA3- TARP gamma2 in the apo state.
Method: single particle / : Pokharna A, Krieger J, Greger I, Ho H, Yamashita K, Cais O, Singh B

PDB-9hpc:
The TMD and the LBD region of the AMPAR complex GluA3- TARP gamma2 in the apo state.
Method: single particle / : Pokharna A, Krieger J, Greger I

PDB-9hpd:
The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the open state.
Method: single particle / : Pokharna A, Krieger J, Greger I

PDB-9hpe:
The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the apo state
Method: single particle / : Pokharna A, Krieger J, Greger I, Singh B

PDB-9hpf:
The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the desensitised state.
Method: single particle / : Pokharna A, Krieger J, Greger I

PDB-9hpk:
Open state TMD-LBD of the GluA3(R439G) with TARP gamma2
Method: single particle / : Pokharna A, Singh B, Krieger J

PDB-9qfh:
The composite map of of the AMPAR complex GluA3- TARP gamma2 in the apo state.
Method: single particle / : Pokharna A, Krieger J, Greger I, Singh B

EMDB-50436:
Cryo-EM Structure of Amyloid-beta Fibrils from Mouse Brain Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50437:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 1
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50438:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 2
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50439:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 3
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50440:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 4
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50441:
Cryo-EM Structure of Tau Filaments from Individuals Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50442:
Cryo-EM Structure of Amyloid-beta Fibrils from Individual Carrying the Uppsala AbetaUpp(1-42)delta(19-24) mutation
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh1:
Cryo-EM Structure of Amyloid-beta Fibrils from Mouse Brain Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh2:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 1
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh3:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 2
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh4:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 3
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh5:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 4
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh6:
Cryo-EM Structure of Tau Filaments from Individuals Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-46632:
E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)
Method: single particle / : Pichkur EB, Panteleev PV, Konevega AL

PDB-9d89:
E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)
Method: single particle / : Pichkur EB, Panteleev PV, Konevega AL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more