[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,216 items for (author: tian & l)

EMDB-71835:
Alpha-synuclein acetylated lysine 80
Method: helical / : Li MH

EMDB-71836:
Alpha-synuclein B
Method: helical / : Li MH

EMDB-71837:
Alpha-synuclein A
Method: helical / : Li MH

EMDB-71838:
Alpha-synuclein acetylated lysine 80 B
Method: helical / : Li MH

EMDB-71839:
Alpha-synuclein acetylated lysine 80 A
Method: helical / : Li MH

EMDB-73843:
Human NIPA2 transporter in the presence of EDTA
Method: single particle / : Karuppan SJ, Connolly N, Shrestha S, Medearis M, Gholampour M, Zubcevic L

EMDB-73878:
Human NIPA2 with magnesium
Method: single particle / : Karuppan SJ, Connolly N, Shrestha S, Medearis M, Gholampour M, Zubcevic L

EMDB-73879:
Human NIPA2 mutant A75T
Method: single particle / : Karuppan SJ, Connolly N, Shrestha S, Medearis M, Gholampour M, Zubcevic L

EMDB-73880:
Human NIPA2 with ATP
Method: single particle / : Karuppan SJ, Connolly N, Shrestha S, Medearis M, Gholampour M, Zubcevic L

PDB-9z6n:
Human NIPA2 transporter in the presence of EDTA
Method: single particle / : Karuppan SJ, Connolly N, Shrestha S, Medearis M, Gholampour M, Zubcevic L

PDB-9z7r:
Human NIPA2 with magnesium
Method: single particle / : Karuppan SJ, Connolly N, Shrestha S, Medearis M, Gholampour M, Zubcevic L

PDB-9z7s:
Human NIPA2 mutant A75T
Method: single particle / : Karuppan SJ, Connolly N, Shrestha S, Medearis M, Gholampour M, Zubcevic L

PDB-9z7t:
Human NIPA2 with ATP
Method: single particle / : Karuppan SJ, Connolly N, Shrestha S, Medearis M, Gholampour M, Zubcevic L

EMDB-73392:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

EMDB-73457:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

PDB-9ysg:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

PDB-9ytc:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

EMDB-66217:
Cryo-electron tomogram of vesicular stomatitis virus (VSV) with rabies virus glycoprotein
Method: electron tomography / : Liu L, Zheng Q, Li S, Xia N

EMDB-66218:
Cryo-electron tomogram of vesicular stomatitis virus (VSV) with rabies virus glycoprotein
Method: electron tomography / : Liu L, Zheng Q, Li S, Xia N

EMDB-57364:
RNA polymerase II elongation complex with the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

EMDB-57390:
RNA polymerase II initially transcribing complex with a 2-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

EMDB-57401:
RNA polymerase II pre-initiation complex bound to ADP-BeF3 in the presence of the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

EMDB-57691:
TFIID-containing RNA polymerase II pre-initiation complex in the presence of the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Grabbe F, Seweryn P, Neef U, Dienemann C, Cramer P

EMDB-57693:
RNA polymerase II initially transcribing complex with a 6-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Grabbe F, Seweryn P, Neef U, Dienemann C, Cramer P

PDB-29tk:
RNA polymerase II elongation complex with the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

PDB-29vf:
RNA polymerase II initially transcribing complex with a 2-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

PDB-29wd:
RNA polymerase II initially transcribing complex with a 2-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

PDB-30ff:
TFIID-containing RNA polymerase II pre-initiation complex in the presence of the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Grabbe F, Seweryn P, Neef U, Dienemann C, Cramer P

PDB-30fh:
RNA polymerase II initially transcribing complex with a 6-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Grabbe F, Seweryn P, Neef U, Dienemann C, Cramer P

EMDB-68177:
C5a-desArg bound C5aR2 in complex with beta-arrestin1
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-68262:
C5a bound C5aR2 in complex with beta-arrestin1
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-68263:
C5a bound C5aR1 in complex with beta-arrestin1
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-68264:
C5a bound C5aR1 in complex with beta-arrestin1
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-68516:
C5a bound C5aR2 in complex with beta-arrestin1
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-68517:
C5a bound C5aR2 in complex with beta-arrestin1(focused on Receptor)
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-68520:
C5a bound C5aR1(V2R C tail) in complex with beta-arrestin1 (Focus on Receptor)
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-68524:
C5a bound C5aR1(V2R C tail) in complex with beta-arrestin1
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-68525:
C5a bound C5aR1(V2R C tail) in complex with beta-arrestin1 (Focus on Arrestin)
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-68529:
C5a-desArg bound C5aR2 in complex with beta-arrestin1(focus on receptor)
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-68531:
C5a-desArg bound C5aR2 in complex with beta-arrestin1
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-68534:
C5a-desArg bound C5aR2 in complex with beta-arrestin1 (Focus on Arrestin)
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-77405:
C5a bound C5aR2 in complex with beta-arrestin1 (focused on barr1-Fab30 complex)
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

PDB-22cr:
C5a-desArg bound C5aR2 in complex with beta-arrestin1
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

PDB-22gk:
C5a bound C5aR2 in complex with beta-arrestin1
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

PDB-22gl:
C5a bound C5aR1 in complex with beta-arrestin1
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

PDB-22gm:
C5a bound C5aR1 in complex with beta-arrestin1
Method: single particle / : Qin J, Cai C, Shan M, Zhang Y

EMDB-58700:
Amyloid beta oligomer Interactions with Extracellular Vesicles by Cryo-ET
Method: electron tomography / : Khursheed A, Viles JH, Zhang H, Shang Q, Tian Y, Szwedziak P, Volkov VA

EMDB-55568:
Structure of a stalled E. coli 70S RNC-NuoK-86 in complex with SecYEG (Consensus Refinement)
Method: single particle / : Rosales-Hernandez C, Busch M, Kamel M, Kedrov A, Beckmann R

EMDB-55570:
Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with SecYEG-YidC (Consensus Refinement)
Method: single particle / : Rosales-Hernandez C, Busch M, Kamel M, Kedrov A, Beckmann R

EMDB-55571:
Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with SecYEG-YidC (Focused Refinement)
Method: single particle / : Rosales-Hernandez C, Busch M, Kamel M, Kedrov A, Beckmann R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more