[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 59 items for (author: seda & m)

EMDB-19132:
Structure of dynein-2 intermediate chain DYNC2I2 (WDR34) in complex with dynein-2 heavy chain DYNC2H1.

EMDB-19133:
Structure of dynein-2 intermediate chain DYNC2I1 (WDR60) in complex with the dynein-2 heavy chain DYNC2H1.

PDB-8rgg:
Structure of dynein-2 intermediate chain DYNC2I2 (WDR34) in complex with dynein-2 heavy chain DYNC2H1.

PDB-8rgh:
Structure of dynein-2 intermediate chain DYNC2I1 (WDR60) in complex with the dynein-2 heavy chain DYNC2H1.

EMDB-16805:
Cryo-EM structure of PcrV/Fab(30-B8)

EMDB-16807:
Cryo-EM structure of PcrV/Fab(11-E5)

PDB-8cr9:
Cryo-EM structure of PcrV/Fab(30-B8)

PDB-8crb:
Cryo-EM structure of PcrV/Fab(11-E5)

EMDB-40094:
17b10 fab in complex with full-length SARS-CoV-2 Spike G614 trimer

EMDB-40095:
17B10 fab in complex with up-RBD of SARS-CoV-2 Spike G614 trimer

PDB-8gjm:
17b10 fab in complex with full-length SARS-CoV-2 Spike G614 trimer

PDB-8gjn:
17B10 fab in complex with up-RBD of SARS-CoV-2 Spike G614 trimer

EMDB-15057:
Fibroblast nucleus sub-volume.

EMDB-15058:
Fibroblast nucleus sub-volume.

EMDB-15059:
Fibroblast nucleus sub-volume.

EMDB-15060:
Fibroblast nucleus sub-volume.

EMDB-15061:
Fibroblast nucleus sub-volume.

EMDB-15062:
Fibroblast nucleus sub-volume.

EMDB-15063:
Fibroblast nucleus sub-volume.

EMDB-14924:
Cryo-STEM tomography of fibroblast nuclear periphery

EMDB-25474:
CryoEM structure of the N-Terminal deleted Rix7 AAA-ATPase

EMDB-25582:
CryoEM structure of the crosslinked Rix7 AAA-ATPase

EMDB-25659:
CryoEM structure of the Rix7 D2 Walker B mutant

PDB-7swl:
CryoEM structure of the N-terminal-deleted Rix7 AAA-ATPase

PDB-7t0v:
CryoEM structure of the crosslinked Rix7 AAA-ATPase

PDB-7t3i:
CryoEM structure of the Rix7 D2 Walker B mutant

EMDB-24416:
Microtubule subtomogram average, randomized azimuth and restricted angular search

EMDB-24417:
Microtubule subtomogram average from particles with a uniform starting orientation with respect to the missing wedge

EMDB-24418:
Microtubule subtomogram average of deconvolved particles, randomized starting azimuth and restricted angular search

EMDB-24419:
Microtubule subtomogram average of deconvolved rarticles, randomized starting azimuth relative to the missing wedge, and restricted angular search

EMDB-24433:
Yeast Nucleus Tomogram

EMDB-24434:
Deconvolved Yeast Nuclear Tomogram

EMDB-24435:
Tomogram of HEK292 Inculsion Body

EMDB-24436:
Deconvolved Tomogram of HEK293 Inclusion Body

PDB-7l6o:
Cryo-EM structure of HIV-1 Env CH848.3.D0949.10.17chim.6R.DS.SOSIP.664

EMDB-23518:
Cryo-EM map of DH851.3 bound to HIV-1 CH505 Env

PDB-7lu9:
Cryo-EM structure of DH851.3 bound to HIV-1 CH505 Env

EMDB-23519:
Cryo-EM map of DH898.1 Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer

PDB-7lua:
Cryo-EM structure of DH898.1 Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer

EMDB-23152:
Cryo-electron microscopy reconstruction of antibody DH898.1 Fab-dimer bound to glycans 332, 392, and 396 of HIV Env CH848 10.17 SOSIP trimer

EMDB-23153:
Cryo-electron microscopy local refinement of antibody DH898.1 Fab-dimer bound to glycans 332, 392, and 396 of HIV Env CH848 10.17 SOSIP trimer

EMDB-23149:
Cryo-electron microscopy reconstruction of antibody DH898.1 Fab-dimer bound near the CD4 binding site of HIV Env SOSIP trimer CH848 10.17

EMDB-23124:
Cryo-electron microcospy reconstruction of CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 HIV Env

EMDB-23145:
Cryo-electron microscopy reconstruction of locally refined antibody DH898.1 Fab-dimer

PDB-7l6m:
Cryo-EM structure of DH898.1 Fab-dimer from local refinement of the Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer

EMDB-23094:
Cryo-EM structure of SARS-CoV-2 2P S ectodomain bound to one copy of domain-swapped antibody 2G12

EMDB-23095:
Cryo-EM structure of SARS-CoV-2 2P S ectodomain bound to two copies of domain-swapped antibody 2G12

EMDB-23097:
Cryo-EM structure of SARS-CoV-2 2P S ectodomain bound domain-swapped antibody 2G12 from masked 3D refinement

PDB-7l02:
Cryo-EM structure of SARS-CoV-2 2P S ectodomain bound to one copy of domain-swapped antibody 2G12

PDB-7l06:
Cryo-EM structure of SARS-CoV-2 2P S ectodomain bound to two copies of domain-swapped antibody 2G12

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more