[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 652 items for (author: sander & b)

EMDB-43909:
nsEM of HIV-1 16055 SOSIP.v8.3 Env in Complex with Week 22 N611/N625, V2, C3/V5 and Base Epitope pAbs (Rabbit ID: 2463)
Method: single particle / : Brown S, Antansijevic A, Ward AB

EMDB-43910:
nsEM of HIV-1 CH505/BG505 SOSIP.v8.1 Env in Complex with Week 6 Base Epitope pAb (Rabbit ID: 2474)
Method: single particle / : Brown S, Ward AB

EMDB-43911:
nsEM of HIV-1 CH505/BG505 SOSIP.v8.1 Env in Complex with Week 26 V1/V3, V2, C3/V5, gp120-Interface, N611, Base, and Anti-Immune Complex Epitope pAbs (Rabbit ID: 2474)
Method: single particle / : Brown S, Ward AB

EMDB-43915:
nsEM of HIV-1 B41 SOSIP.v4.1 Env in Complex with Week 4 N611 and Base Epitope pAbs (Rabbit ID: 1646)
Method: single particle / : Brown S, Ward AB

EMDB-43916:
nsEM of HIV-1 B41 SOSIP.v4.1 Env in Complex with Week 6 N611 and Base Epitope pAbs (Rabbit ID: 1646)
Method: single particle / : Brown S, Ward AB

EMDB-43917:
nsEM of HIV-1 B41 SOSIP.v4.1 Env in Complex with Week 22 N611, N241, Base, and Anti-Immune Complex Epitope pAbs (Rabbit ID: 1646)
Method: single particle / : Brown S, Ward AB

EMDB-43918:
nsEM of HIV-1 BG505 SOSIP.v5.2 (N289/N241) Env in Complex with Week 10 N289 and Base Epitope pAbs (NHP ID: Rh33203)
Method: single particle / : Brown S, Sewall LM, Ward AB

EMDB-43919:
nsEM of HIV-1 BG505 SOSIP.v5.2 (N289/N241) Env in Complex with Week 26 gp120-Interface, N289, C3/V5 and Base Epitope pAbs (NHP ID: Rh33203)
Method: single particle / : Brown S, Sewall LM, Ward AB

EMDB-51454:
Mtb PNPase Rv2783c
Method: single particle / : Griesser T, Sander P

EMDB-51455:
Mtb PNPase Rv2783c Mutant L328F
Method: single particle / : Griesser T, Sander P

PDB-9gms:
Mtb PNPase Rv2783c
Method: single particle / : Griesser T, Sander P

PDB-9gmt:
Mtb PNPase Rv2783c Mutant L328F
Method: single particle / : Griesser T, Sander P

EMDB-48283:
61-12A01 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48286:
206-3G08 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48287:
206-9C09 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48290:
273-4D01 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48291:
253-7A03 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-70490:
BG505 GT1.1 SOSIP in complex with gp41-base epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70491:
BG505 GT1.1 SOSIP in complex with V1V2V3 epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70492:
BG505 GT1.1 SOSIP in complex with C3V5 epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70493:
BG505 GT1.1 SOSIP in complex with CD4bs epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70494:
BG505 GT1.1 SOSIP in complex with gp41 glycan hole epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70495:
BG505 GT1.1 SOSIP in complex with gp41 fusion peptide epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

PDB-9mi0:
61-12A01 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9mia:
206-3G08 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9mib:
206-9C09 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9mih:
273-4D01 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9mii:
253-7A03 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-49656:
Rabbit RB142 polyclonal Fab in complex with HIV-1 1086C NFL Env trimer
Method: single particle / : Lin RN, Torres JL, Ozorowski G, Ward AB

EMDB-43838:
HIV 16055.v8.3 SOSIP Env in Complex with V2 Epitope and Anti-Immune Complex pAbs from Rabbit 2464
Method: single particle / : Brown S, Antansijevic A, Ward AB

EMDB-43894:
HIV-1 B41 SOSIP.v4.1 Env in Complex with N241 Epitope and Anti-Immune Complex Antibodies
Method: single particle / : Brown S, Antansijevic A, Ward AB

EMDB-43895:
nsEM of HIV-1 16055 SOSIP.v8.3 Env in Complex with Week 6 Base pAb (Rabbit ID: 2464)
Method: single particle / : Brown S, Antansijevic A, Ward AB

EMDB-43896:
nsEM of HIV-1 16055 SOSIP.v8.3 Env in Complex with Week 22 N611, V2, and Base Epitope pAbs (Rabbit ID: 2464)
Method: single particle / : Brown S, Antansijevic A, Ward AB

EMDB-43935:
HIV BG505.v5.2 (N289/N241) SOSIP Env in Complex with gp120-Interface pAb from Rh.33203
Method: single particle / : Brown S, Antansijevic A, Ward AB

EMDB-43967:
HIV 16055.v8.3 SOSIP Env in Complex with Base and N625 Epitope pAbs from Rabbit 2463
Method: single particle / : Brown S, Antanasijevic A, Ward AB

EMDB-43968:
HIV 16055.v8.3 SOSIP Env in Complex with Base and N611 Epitope pAbs from Rabbit 2463
Method: single particle / : Brown S, Antansijevic A, Ward AB

EMDB-43981:
HIV BG505.v5.2 (N289/N241) SOSIP Env in Complex with V5 pAb from Rh.33203
Method: single particle / : Brown S, Antansijevic A, Ward AB

EMDB-43998:
HIV BG505.v5.2 (N289/N241) SOSIP Env in Complex with V5, gp120-Interface, and Anti-Immune Complex pAbs from Rh.33203
Method: single particle / : Brown S, Antansijevic A, Ward AB

EMDB-43999:
HIV CH505/BG505 SOSIP.v8.1 Env in Complex with V1/V3 Epitope and Anti-Immune Complex pAbs from Rabbit 2474
Method: single particle / : Brown S, Antanasijevic A, Ward AB

EMDB-44076:
nsEM of HIV-1 BG505 SOSIP.v5.2 (N289/N241) Env in Complex with Week 38 gp120-Interface, N289, C3/V5, Base, and Anti-Immune Complex Epitope pAbs (NHP ID: Rh33203)
Method: single particle / : Brown S, Sewall LM, Ward AB

PDB-9atz:
HIV 16055.v8.3 SOSIP Env in Complex with V2 Epitope and Anti-Immune Complex pAbs from Rabbit 2464
Method: single particle / : Brown S, Antansijevic A, Ward AB

PDB-9axd:
HIV BG505.v5.2 (N289/N241) SOSIP Env in Complex with gp120-Interface pAb from Rh.33203
Method: single particle / : Brown S, Antansijevic A, Ward AB

PDB-9axi:
HIV 16055.v8.3 SOSIP Env in Complex with Base and N625 Epitope pAbs from Rabbit 2463
Method: single particle / : Brown S, Antanasijevic A, Ward AB

PDB-9axk:
HIV 16055.v8.3 SOSIP Env in Complex with Base and N611 Epitope pAbs from Rabbit 2463
Method: single particle / : Brown S, Antansijevic A, Ward AB

PDB-9ay6:
HIV BG505.v5.2 (N289/N241) SOSIP Env in Complex with V5 pAb from Rh.33203
Method: single particle / : Brown S, Antansijevic A, Ward AB

PDB-9ays:
HIV BG505.v5.2 (N289/N241) SOSIP Env in Complex with V5, gp120-Interface, and Anti-Immune Complex pAbs from Rh.33203
Method: single particle / : Brown S, Antansijevic A, Ward AB

PDB-9ayv:
HIV CH505/BG505 SOSIP.v8.1 Env in Complex with V1/V3 Epitope and Anti-Immune Complex pAbs from Rabbit 2474
Method: single particle / : Brown S, Antanasijevic A, Ward AB

EMDB-43794:
COVA2-15 fragment antigen binding in complex with SARS-CoV-2 6P-mut7 S protein
Method: single particle / : Ozorowski G, Turner HL, Ward AB

PDB-9aru:
COVA2-15 fragment antigen binding in complex with SARS-CoV-2 6P-mut7 S protein
Method: single particle / : Ozorowski G, Turner HL, Ward AB

EMDB-18997:
Cryo-EM structure of the Sars-Cov2 S trimer without RBDs
Method: single particle / : Effantin G

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more