[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 22 items for (author: safdari & ha)

EMDB-50320:
Structure of E. coli 30S-IF1-IF3-mRNA-Kasugamycin complex
Method: single particle / : Safdari HA, Wilson DN

EMDB-50327:
Structure of E. coli 30S-IF1-IF3-mRNA-Edeine complex
Method: single particle / : Safdari HA, Wilson DN

EMDB-50476:
Structure of 30S-IF1-IF3-mRNA-GE81112A complex
Method: single particle / : Safdari HA, Morici M, Wilson DN

EMDB-50912:
Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex
Method: single particle / : Safdari HA, Morici M, Wilson DN

EMDB-51214:
Structure of Kasugamycin-30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, open form
Method: single particle / : Safdari HA, Wilson DN

EMDB-51217:
Structure of Edeine-30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, open form
Method: single particle / : Safdari HA, Wilson DN

PDB-9fco:
Structure of E. coli 30S-IF1-IF3-mRNA-Kasugamycin complex
Method: single particle / : Safdari HA, Wilson DN

PDB-9fda:
Structure of E. coli 30S-IF1-IF3-mRNA-Edeine complex
Method: single particle / : Safdari HA, Wilson DN

PDB-9fib:
Structure of 30S-IF1-IF3-mRNA-GE81112A complex
Method: single particle / : Safdari HA, Morici M, Wilson DN

PDB-9g06:
Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex
Method: single particle / : Safdari HA, Morici M, Wilson DN

EMDB-18534:
Structure of SecM-stalled Escherichia coli 70S ribosome
Method: single particle / : Gersteuer F, Morici M, Wilson DN

EMDB-18590:
Cryo-EM map of rotated SecM-stalled Escherichia coli 70S ribosome
Method: single particle / : Gersteuer F, Morici M, Wilson DN

PDB-8qoa:
Structure of SecM-stalled Escherichia coli 70S ribosome
Method: single particle / : Gersteuer F, Morici M, Wilson DN

EMDB-15488:
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome
Method: single particle / : Koller TO, Morici M, Wilson DN

EMDB-15523:
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome
Method: single particle / : Koller TO, Morici M, Wilson DN

EMDB-15533:
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit
Method: single particle / : Koller TO, Morici M, Wilson DN

PDB-8akn:
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome
Method: single particle / : Koller TO, Morici M, Wilson DN

PDB-8am9:
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome
Method: single particle / : Koller TO, Morici M, Wilson DN

PDB-8ana:
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit
Method: single particle / : Koller TO, Morici M, Wilson DN

EMDB-15558:
Structure of Escherischia coli heat shock protein Hsp15 in complexwith ribosomal 50S subunits bearing peptidyl-tRNA.
Method: single particle / : Safdari HA, Wilson DN

PDB-8ap4:
Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA
Method: single particle / : Safdari HA, Wilson DN

EMDB-6967:
Anti-HIV-1 AIIMS-P01 Fab in complexed with BG505.SOSIP.664.C2 T332N gp140 trimer
Method: single particle / : Luthra K, Kumar S, Dutta S, Lodha R

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more