[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 95 items for (author: rast & a)

EMDB-19823:
Subtomogram average of nucleosomes annotated by Template Learning in isolated mitotic chromosomes
Method: subtomogram averaging / : Patra G, Harastani M, Eltsov M

EMDB-19825:
Subtomogram average of nucleosomes annotated by template matching in isolated mitotic chromosomes
Method: subtomogram averaging / : Patra G, Harastani M, Eltsov M

EMDB-47368:
The structure of myosin thick filament from Drosophila melanogaster flight muscle with ordered arrangement of myosin heads
Method: single particle / : Rastegarpouyani H, Hojjatian A, Taylor KA

EMDB-47369:
The structure of myosin thick filament from Drosophila melanogaster flight muscle with disordered arrangement of myosin heads
Method: single particle / : Rastegarpouyani H, Hojjatian A, Taylor KA

EMDB-50567:
Cryo-EM structure of the BcsB hexameric crown from the E. coli cellulose secretion macrocomplex
Method: single particle / : Anso I, Krasteva PV

EMDB-50571:
Cryo-EM structure of the c-di-GMP-free synthase:pEtN transferase complex (BcsA-Bct-G3) from the E. coli cellulose secretion macrocomplex
Method: single particle / : Anso I, Krasteva PV

EMDB-50581:
Cryo-EM structure of the c-di-GMP-bound synthase:pEtN transferase complex (BcsA-Bct-G3) from the E. coli cellulose secretion macrocomplex
Method: single particle / : Anso I, Krasteva PV

EMDB-50584:
Cryo-EM structure of the c-di-GMP-saturated Bcs macrocomplex (BcsABR2Q2E2F2G3) for cellulose secretion of E. coli (filtered to 6A)
Method: single particle / : Anso I, Krasteva PV

EMDB-50595:
Cryo-EM structure of the c-di-GMP non-saturated Bcs macrocomplex (BcsABR2Q2E2F2G3) for cellulose secretion of E. coli (filtered to 7A)
Method: single particle / : Anso I, Krasteva PV

EMDB-50599:
Cryo-EM structure of the c-di-GMP-saturated 'crown'less Bcs macrocomplex for cellulose secretion in E. coli
Method: single particle / : Anso I, Krasteva PV

EMDB-50619:
Cryo-EM structure of the BcsE2F2 regulatory subcomplex from the E. coli Bcs macrocomplex for cellulose secretion (local refinement)
Method: single particle / : Anso I, Krasteva PV

EMDB-50632:
Cryo-EM structure of the 'crown'less Bcs macrocomplex for E. coli cellulose secretion in non-saturating c-di-GMP (local)
Method: single particle / : Anso I, Krasteva PV

EMDB-50633:
Cryo-EM structure of the BcsEFRQ regulatory subcomplex for E. coli cellulose secretion in non-saturating c-di-GMP (local)
Method: single particle / : Anso I, Krasteva PV

PDB-9fmt:
Cryo-EM structure of the BcsB hexameric crown from the E. coli cellulose secretion macrocomplex
Method: single particle / : Anso I, Krasteva PV

PDB-9fmv:
Cryo-EM structure of the c-di-GMP-free synthase:pEtN transferase complex (BcsA-Bct-G3) from the E. coli cellulose secretion macrocomplex
Method: single particle / : Anso I, Krasteva PV

PDB-9fmz:
Cryo-EM structure of the c-di-GMP-bound synthase:pEtN transferase complex (BcsA-Bct-G3) from the E. coli cellulose secretion macrocomplex
Method: single particle / : Anso I, Krasteva PV

PDB-9fnn:
Cryo-EM structure of the c-di-GMP-saturated 'crown'less Bcs macrocomplex for cellulose secretion in E. coli
Method: single particle / : Anso I, Krasteva PV

PDB-9fo7:
Cryo-EM structure of the BcsE2F2 regulatory subcomplex from the E. coli Bcs macrocomplex for cellulose secretion (local refinement)
Method: single particle / : Anso I, Krasteva PV

PDB-9fp0:
Cryo-EM structure of the 'crown'less Bcs macrocomplex for E. coli cellulose secretion in non-saturating c-di-GMP (local)
Method: single particle / : Anso I, Krasteva PV

PDB-9fp2:
Cryo-EM structure of the BcsEFRQ regulatory subcomplex for E. coli cellulose secretion in non-saturating c-di-GMP (local)
Method: single particle / : Anso I, Krasteva PV

EMDB-18379:
Structure of human Asc1/CD98hc heteromeric amino acid transporter
Method: single particle / : Martinez-Molledo M, Rullo-Tubau J, Errasti-Murugarren E, Palacin M, Llorca O

PDB-8qey:
Structure of human Asc1/CD98hc heteromeric amino acid transporter
Method: single particle / : Martinez-Molledo M, Rullo-Tubau J, Errasti-Murugarren E, Palacin M, Llorca O

EMDB-40468:
In situ human cardiac thick filament in the relaxed state
Method: subtomogram averaging / : Chen L, Liu J, Rastegarpouyani H, Janssen PML, Pinto JR, Taylor KA

EMDB-40471:
Human cardiac interacting heads motif (IHM-C) in complete form
Method: subtomogram averaging / : Chen L, Liu J, Rastegarpouyani H, Janssen PML, Pinto JR, Taylor KA

EMDB-40475:
Human cardiac interacting heads motif (IHM-C) in semi form
Method: subtomogram averaging / : Chen L, Liu J, Rastegarpouyani H, Janssen PML, Pinto JR, Taylor KA

EMDB-40476:
Human cardiac interacting heads motif (IHM-S)
Method: subtomogram averaging / : Chen L, Liu J, Rastegarpouyani H, Janssen PML, Pinto JR, Taylor KA

EMDB-40478:
Human cardiac interacting heads motif (IHM-D) in semi form
Method: subtomogram averaging / : Chen L, Liu J, Rastegarpouyani H, Janssen PML, Pinto JR, Taylor KA

EMDB-17735:
Cryo-EM structure of Orrella dioscoreae BcsD
Method: single particle / : Puygrenier L, Decossas M, Krasteva PV

EMDB-17788:
Cryo-EM structure of Dickeya dadantii BcsD
Method: single particle / : Notopoulou A, Krasteva PV

EMDB-17791:
Cryo-EM structure of Enterobacter sp. 638 BcsD
Method: single particle / : Notopoulou A, Krasteva PV

PDB-8pkd:
Cryo-EM structure of Orrella dioscoreae BcsD
Method: single particle / : Puygrenier L, Decossas M, Krasteva PV

PDB-8poc:
Cryo-EM structure of Dickeya dadantii BcsD
Method: single particle / : Notopoulou A, Krasteva PV

PDB-8pog:
Cryo-EM structure of Enterobacter sp. 638 BcsD
Method: single particle / : Notopoulou A, Krasteva PV

EMDB-17445:
Cryo-EM structure of the c-di-GMP-free FleQ-FleN master regulator complex of P. aeruginosa
Method: single particle / : Torres-Sanchez L, Krasteva PV

EMDB-17581:
Cryo-EM structure of the c-di-GMP-bound FleQ-FleN master regulator complex from Pseudomonas aeruginosa
Method: single particle / : Torres-Sanchez LT, Krasteva PV

PDB-8p53:
Cryo-EM structure of the c-di-GMP-free FleQ-FleN master regulator complex of P. aeruginosa
Method: single particle / : Torres-Sanchez L, Krasteva PV

PDB-8pb9:
Cryo-EM structure of the c-di-GMP-bound FleQ-FleN master regulator complex from Pseudomonas aeruginosa
Method: single particle / : Torres-Sanchez LT, Krasteva PV

EMDB-42024:
CryoEM structure of the Drosophila melanogaster flight muscle myosin filament
Method: single particle / : Abbasi Yeganeh F, Rastegarpouyani H, Li J, Taylor KA

PDB-8u8h:
The structure of flightin within myosin thick filaments from Drosophila melanogaster flight muscle
Method: single particle / : Abbasi Yeganeh F, Rastegarpouyani H, Li J, Taylor KA

PDB-8u95:
The structure of myosin heavy chain from Drosophila melanogaster flight muscle thick filaments
Method: single particle / : Abbasi Yeganeh F, Rastegarpouyani H, Li J, Taylor KA

EMDB-15205:
cryoEM structure of the catalytically inactive EndoS from S. pyogenes in complex with the Fc region of immunoglobulin G1
Method: single particle / : Trastoy B, Cifuente JO, Du JJ, Sundberg EJ, Guerin ME

PDB-8a64:
cryoEM structure of the catalytically inactive EndoS from S. pyogenes in complex with the Fc region of immunoglobulin G1.
Method: single particle / : Trastoy B, Cifuente JO, Du JJ, Sundberg EJ, Guerin ME

EMDB-28208:
CryoEM map of myosin thick filament from Bombus ignitus asynchronous flight muscle
Method: single particle / : Li J, Rahmani H, Abbasi Yeganeh F, Rastegarpouyani H, Taylor DW, Wood NB, Previs MJ, Iwamoto H, Taylor KA

PDB-8ew5:
The structure of flightin within myosin thick filaments from Bombus ignitus flight muscle
Method: single particle / : Li J, Rahmani H, Abbasi Yeganeh F, Rastegarpouyani H, Taylor DW, Wood NB, Previs MJ, Iwamoto H, Taylor KA

EMDB-15039:
BcsH-BcsD 'beads-on-a-string' filament, local refine
Method: single particle / : Krasteva PV, Abidi W, Decossas M

EMDB-15040:
BcsHD cis-filaments: four 'beads-on-a-string'
Method: single particle / : Krasteva PV, Abidi W, Decossas M

EMDB-15041:
Solution BcsD structure
Method: single particle / : Krasteva PV, Abidi W, Decossas M

PDB-7zzq:
BcsH-BcsD 'beads-on-a-string' filament, local refine
Method: single particle / : Krasteva PV, Abidi W, Decossas M

PDB-7zzy:
Solution BcsD structure
Method: single particle / : Krasteva PV, Abidi W, Decossas M

EMDB-27491:
CryoEM structure of the A. aeolicus WzmWzt transporter bound to the native O antigen
Method: single particle / : Spellmon N, Muszynski A, Vlach J, Zimmer J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more