[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 43 items for (author: ramrath & d)

EMDB-13661:
Late assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit

PDB-7pub:
Late assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit

EMDB-13660:
Middle assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit

PDB-7pua:
Middle assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit

EMDB-10999:
State A of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate

EMDB-11000:
State B of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate

PDB-6yxx:
State A of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate

PDB-6yxy:
State B of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate

EMDB-10176:
mt-SSU assemblosome of wild-type Trypanosoma brucei brucei

EMDB-10178:
mt-SSU middle assembly intermediate of wild-type Trypanosoma brucei brucei

EMDB-10179:
mt-SSU late assembly intermediate of wild-type Trypanosoma brucei brucei

EMDB-10180:
mt-SSU assemblosome of Trypanosoma brucei

PDB-6sgb:
mt-SSU assemblosome of Trypanosoma brucei

EMDB-10175:
Head domain of the mt-SSU assemblosome from Trypanosoma brucei

EMDB-10177:
Body domain of the mt-SSU assemblosome from Trypanosoma brucei

PDB-6sg9:
Head domain of the mt-SSU assemblosome from Trypanosoma brucei

PDB-6sga:
Body domain of the mt-SSU assemblosome from Trypanosoma brucei

EMDB-0229:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete mitoribosome

PDB-6hiv:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete mitoribosome

EMDB-0230:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete small mitoribosomal subunit in complex with mt-IF-3

EMDB-0231:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the large mitoribosomal subunit

EMDB-0232:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the body of the small mitoribosomal subunit in complex with mt-IF-3

EMDB-0233:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the head of the small mitoribosomal subunit

PDB-6hiw:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete small mitoribosomal subunit in complex with mt-IF-3

PDB-6hix:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the large mitoribosomal subunit

PDB-6hiy:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the body of the small mitoribosomal subunit in complex with mt-IF-3

PDB-6hiz:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the head of the small mitoribosomal subunit

EMDB-3285:
Cryo-electron microscopy structure of ribosome-bound initiation factor 2

EMDB-6559:
Cryo-electron microscopy structure of ribosome-bound initiation factor 2 70S IC II state

PDB-3jcj:
Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association

PDB-3jcn:
Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I

PDB-4cxg:
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

PDB-4cxh:
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

PDB-4uje:
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

EMDB-2620:
POST-translocational 80S ribosomal state of Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

EMDB-2621:
PRE-translocational (classical-1) 80S ribosomal state of Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

EMDB-2622:
PRE-translocational (classical-2) 80S ribosomal state of Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

EMDB-2623:
Sampling intermediate of Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

EMDB-2624:
Recognition intermediate of Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

PDB-4v7b:
Visualization of two tRNAs trapped in transit during EF-G-mediated translocation

PDB-4v6t:
Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

EMDB-5775:
Cryo-EM reconstruction of a authentic 70S-tRNA2-mRNA-EF-G translocation intermediate

EMDB-5386:
tmRNA translocation and MLD-loading on the ribosome: a 70S-tmRNA-EF-G complex

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more