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- PDB-6hiv: Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosom... -

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Entry
Database: PDB / ID: 6hiv
TitleCryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete mitoribosome
Components
  • (50S ribosomal protein ...) x 3
  • (UNK) x 17
  • (bL12m) x 3
  • (mL68) x 2
  • 12S rRNAMT-RNR1
  • 9s rRNA
  • bL19m
  • bL20m
  • bL21m
  • bL27m
  • bL28m
  • bL31m
  • bL32m
  • bL33m
  • bL35m
  • bL36m
  • bL9m
  • bS12m
  • bS16m
  • bS18m
  • bS6m
  • mL100
  • mL38
  • mL40
  • mL41
  • mL42
  • mL43
  • mL46
  • mL49
  • mL52
  • mL53
  • mL63
  • mL67
  • mL69
  • mL70
  • mL71
  • mL72
  • mL73
  • mL74
  • mL75
  • mL76
  • mL77
  • mL78
  • mL79
  • mL80
  • mL81
  • mL82
  • mL83
  • mL84
  • mL85
  • mL86
  • mL87
  • mL88
  • mL89
  • mL90
  • mL92
  • mL93
  • mL94
  • mL95
  • mL96
  • mL97
  • mL98
  • mL99
  • mS22
  • mS23
  • mS26
  • mS29
  • mS33
  • mS34
  • mS35
  • mS37
  • mS38
  • mS43
  • mS47
  • mS52
  • mS91
  • ms34
  • ms42
  • ms48
  • ms49
  • ms50
  • ms51
  • ms53
  • ms54
  • ms55
  • ms56
  • ms57
  • ms58
  • ms59
  • ms60
  • ms61
  • ms62
  • ms63
  • ms64
  • ms65
  • ms66
  • ms67
  • ms68
  • ms69
  • ms70
  • ms71
  • ms72
  • ms73
  • ms74
  • mt-IF-3
  • uL10m
  • uL11m
  • uL15m
  • uL22m
  • uL23m
  • uL24m
  • uL29m
  • uL30m
  • uL3m
  • uL4m
  • uS10m
  • uS11m
  • uS12
  • uS14m
  • uS15m
  • uS17m
  • uS19m
  • uS3m
  • uS55m
  • uS8m
  • uS9m
KeywordsRIBOSOME / mitoribosome / translation / Trypanosoma / large ribosomal subunit / small ribosomal subunit / 12S rRNA / 9S rRNA / ribosomal protein
Function / homologyRibosomal protein S8 / Ribosomal protein L21-like / Ribosomal protein L46, N-terminal / Ribosomal protein L4 domain superfamily / Ribosomal protein S16 domain superfamily / Cyclophilin-type peptidyl-prolyl cis-trans isomerase / Probable Zinc-ribbon domain / Ribosomal protein L28/L24 / Cyclophilin-like domain superfamily / Ribosomal protein L11, N-terminal ...Ribosomal protein S8 / Ribosomal protein L21-like / Ribosomal protein L46, N-terminal / Ribosomal protein L4 domain superfamily / Ribosomal protein S16 domain superfamily / Cyclophilin-type peptidyl-prolyl cis-trans isomerase / Probable Zinc-ribbon domain / Ribosomal protein L28/L24 / Cyclophilin-like domain superfamily / Ribosomal protein L11, N-terminal / ClpP/crotonase-like domain superfamily / Alpha/Beta hydrolase fold / Ubiquitin-like domain superfamily / Mitochondrial 28S ribosomal protein S34 / Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type / Ribosomal protein S12 / Ribosomal protein L20, C-terminal / Ribosomal protein L18e/L15P / Ribosomal protein L11, C-terminal / Ribosomal protein S8 superfamily / Ribosomal protein L10e/L16 / 50S ribosomal protein uL4 / Ribosomal protein L25/L23 / Translation elongation factor EF1B/ribosomal protein S6 / Ribosomal protein S5 domain 2-type fold, subgroup / Ribosomal protein L2, domain 2 / NUDIX hydrolase-like domain superfamily / Ribosomal protein L30, ferredoxin-like fold domain / LysM domain / Ribosomal protein S5 domain 2-type fold / IGR protein motif / Ribosomal protein S23/S29, mitochondrial / Protein kinase A anchor protein, nuclear localisation signal domain / Manganese/iron superoxide dismutase, N-terminal / Manganese/iron superoxide dismutase, C-terminal / Ribosomal protein L3, bacterial/organelle-type / Ribosomal protein L9, N-terminal / Phosphatidylethanolamine-binding protein, eukaryotic / L21-like superfamily / Nucleotide-binding alpha-beta plait domain superfamily / Ribosomal protein L23 / Ribosomal protein L33 superfamily / Iron/manganese superoxide dismutases, alpha-hairpin domain / Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD / DnaJ domain / Ribosomal protein L22p/L17e / Ubiquitin family / Ribosomal protein L16p/L10e / Ribosomal protein L3 / Ribosomal protein L28/L24 superfamily / Ribosomal protein L11, RNA binding domain / Ribosomal protein S15 / Ribosomal protein L30p/L7e / Ribosomal protein S17 / Ribosomal protein S9/S16 / Ribosomal protein L4/L1 family / LIM domain / MRP-L47 superfamily, mitochondrial / Ribosomal protein S11 superfamily / Ribosomal L18e/L15P superfamily / Ribosomal protein L11, C-terminal domain superfamily / Zinc finger C2H2 superfamily / Thioredoxin-like superfamily / Manganese/iron superoxide dismutase, C-terminal domain superfamily / Manganese/iron superoxide dismutase, N-terminal domain superfamily / Ribosomal protein L17 superfamily / Ribosomal protein L22/L17 superfamily / PEBP-like superfamily / LysM domain superfamily / Ribosomal protein L10e/L16 superfamily / Ribosomal protein L11/L12, N-terminal domain superfamily / Chaperone J-domain superfamily / Ribosomal protein S18 superfamily / Rhodanese-like domain superfamily / Nucleoid-associated protein YbaB-like domain superfamily / Ribosomal protein L13 superfamily / Ribosomal protein L30, ferredoxin-like fold domain superfamily / Ribosomal protein L23/L15e core domain superfamily / Nucleic acid-binding, OB-fold / Ribosomal protein L13 / Mitochondrial 39-S ribosomal protein L47 (MRP-L47) / Ribosomal protein L9 / Ribosomal protein L16 / Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A / Tetratricopeptide-like helical domain superfamily / Ribosomal prokaryotic L21 protein / Ribosomal protein L17 / Ribosomal protein L9, N-terminal domain / LysM domain / Iron/manganese superoxide dismutases, C-terminal domain / Ribosomal protein S5, C-terminal domain / Ribosomal protein L11, N-terminal domain / Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain / Mitochondrial ribosomal death-associated protein 3 / Ribosomal protein L17 / AKAP7 2'5' RNA ligase-like domain / 39S mitochondrial ribosomal protein L46 / Probable Zinc-ribbon domain / Mitochondrial 28S ribosomal protein S34 / Enoyl-CoA hydratase/isomerase
Function and homology information
Specimen sourceTrypanosoma brucei brucei (eukaryote)
MethodELECTRON MICROSCOPY / single particle reconstruction / cryo EM / 7.8 Å resolution
AuthorsRamrath, D.J.F. / Niemann, M. / Leibundgut, M. / Bieri, P. / Prange, C. / Horn, E.K. / Leitner, A. / Boerhringer, D. / Schneider, A. / Ban, N.
CitationJournal: Science / Year: 2018
Title: Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Authors: David J F Ramrath / Moritz Niemann / Marc Leibundgut / Philipp Bieri / Céline Prange / Elke K Horn / Alexander Leitner / Daniel Boehringer / André Schneider / Nenad Ban
Abstract: Ribosomal RNA (rRNA) plays key functional and architectural roles in ribosomes. Using electron microscopy, we determined the atomic structure of a highly divergent ribosome found in mitochondria of , ...Ribosomal RNA (rRNA) plays key functional and architectural roles in ribosomes. Using electron microscopy, we determined the atomic structure of a highly divergent ribosome found in mitochondria of , a unicellular parasite that causes sleeping sickness in humans. The trypanosomal mitoribosome features the smallest rRNAs and contains more proteins than all known ribosomes. The structure shows how the proteins have taken over the role of architectural scaffold from the rRNA: They form an autonomous outer shell that surrounds the entire particle and stabilizes and positions the functionally important regions of the rRNA. Our results also reveal the "minimal" set of conserved rRNA and protein components shared by all ribosomes that help us define the most essential functional elements.
Validation Report
SummaryFull reportAbout validation report
DateDeposition: Aug 31, 2018 / Release: Oct 3, 2018
RevisionDateData content typeGroupCategoryItemProviderType
1.0Oct 3, 2018Structure modelrepositoryInitial release
1.1Oct 24, 2018Structure modelAdvisory / Data collection / Derived calculationspdbx_validate_close_contact / struct_conn / struct_conn_type
1.2Nov 7, 2018Structure modelData collection / Database referencescitation_citation.journal_volume

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Structure visualization

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  • Deposited structure unit
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  • Superimposition on EM map
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Assembly

Deposited unit
DA: ms48
DD: ms51
DI: ms56
DL: ms59
DM: ms60
DN: ms61
DO: ms62
DP: ms63
DQ: ms64
DR: ms65
DS: ms66
DU: ms68
DZ: ms73
Da: ms74
DB: ms49
DC: ms50
DE: mS52
DF: ms53
DG: ms54
DH: ms55
DJ: ms57
DK: ms58
DT: ms67
DV: ms69
DW: ms70
DX: ms71
DY: ms72
CC: uS3m
CE: uS55m
CF: bS6m
CH: uS8m
CI: uS9m
CJ: uS10m
CK: uS11m
CL: uS12
CN: uS14m
CO: uS15m
CP: bS16m
CQ: uS17m
CR: bS18m
CS: uS19m
CU: bS12m
CZ: mt-IF-3
Ca: mS22
Cb: mS23
Cd: mS26
Cg: mS29
Ci: mS33
Cj: mS34
Ck: mS35
Cm: mS37
Cn: mS38
Cp: ms34
Cq: ms42
Cr: mS43
Cv: mS47
CA: 9s rRNA
UO: UNK
UP: UNK
UQ: UNK
UR: UNK
US: UNK
UT: UNK
A0: bL27m
A1: bL28m
A2: uL29m
A3: uL30m
A4: bL31m
A5: bL32m
A6: bL33m
A8: bL35m
A9: bL36m
AE: uL3m
AF: uL4m
AI: bL9m
AJ: uL10m
AK: uL11m
AN: 50S ribosomal protein L13, putative
AP: uL15m
AQ: 50S ribosomal protein L16, putative
AR: 50S ribosomal protein L17, putative
AT: bL19m
AU: bL20m
AV: bL21m
AW: uL22m
AX: uL23m
AY: uL24m
Ab: mL38
Ad: mL40
Ae: mL41
Af: mL42
Ag: mL43
Aj: mL46
Al: mL49
Ao: mL52
Ap: mL53
At: mL63
Av: mL68
AB: bL12m
AC: bL12m
AD: bL12m
AG: bL12m
AA: 12S rRNA
BA: mL67
BB: mL68
BC: mL69
BD: mL70
BE: mL71
BF: mL72
BG: mL73
BH: mL74
BI: mL75
BJ: mL76
BK: mL77
BL: mL78
BM: mL79
BN: mL80
BO: mL81
BP: mL82
BQ: mL83
BR: mL84
BS: mL85
BT: mL86
BU: mL87
BV: mL88
BW: mL89
BX: mL90
BY: mS91
BZ: mL92
Ba: mL93
Bb: mL94
Bc: mL95
Bd: mL96
Be: mL97
Bf: mL98
Bg: mL99
Bh: mL100
UA: UNK
UB: UNK
UC: UNK
UD: UNK
UE: UNK
UF: UNK
UG: UNK
UH: UNK
UI: UNK
UK: UNK
UL: UNK
UM: UNK
UN: UNK
UU: UNK
UV: UNK
UW: UNK
UX: UNK
hetero molecules


Theoretical massNumber of molelcules
Total (without water)5,396,177219
Polyers5,391,846154
Non-polymers4,33165
Water543
1


  • idetical with deposited unit
  • defined by author
  • Evidence: mass spectrometry
TypeNameSymmetry operationNumber
identity operation1_5551

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Components

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Protein/peptide , 142 types, 149 molecules DADDDIDLDMDNDODPDQDRDSDUDZDaDBDCDEDFDGDHDJDKDTDVDWDXDYCCCECF...

#1: Protein/peptide ms48


Mass: 201811.188 Da / Num. of mol.: 1 / Details: residues 1470-1487 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.8.5200 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57UJ2
#2: Protein/peptide ms51


Mass: 95080.992 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.02.3180 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q385L8
#3: Protein/peptide ms56


Mass: 47306.836 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.6.4560 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q587C2
#4: Protein/peptide ms59


Mass: 35395.676 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.70.4220 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38BS2
#5: Protein/peptide ms60


Mass: 34546.641 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_VII2960 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZSF8
#6: Protein/peptide ms61


Mass: 33482.340 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb09.211.4510 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38D60
#7: Protein/peptide ms62


Mass: 32068.100 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.3300 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q383D1
#8: Protein/peptide ms63


Mass: 31922.178 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb09.160.3800 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38F25
#9: Protein/peptide ms64


Mass: 30742.207 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.5460 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q382E8
#10: Protein/peptide ms65


Mass: 30617.381 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_V5090 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZPP1
#11: Protein/peptide ms66


Mass: 29960.182 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.61.3110 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q388L7
#12: Protein/peptide ms68


Mass: 26472.807 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_III2230 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZKC1
#13: Protein/peptide ms73


Mass: 11360.885 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.6.4580 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q587C4
#14: Protein/peptide ms74


Mass: 8203.408 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_X9770 / Production host: Trypanosoma brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: D0A3P2
#15: Protein/peptide ms49


Mass: 137234.125 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_II2470 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZJE4
#16: Protein/peptide ms50


Mass: 131719.250 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_VII3350 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZSK8
#17: Protein/peptide mS52


Mass: 84851.086 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q386Q7
#18: Protein/peptide ms53


Mass: 75338.914 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb09.160.4750 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38ET1
#19: Protein/peptide ms54


Mass: 72046.031 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.5.1790 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q57ZP8
#20: Protein/peptide ms55


Mass: 66676.680 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.3.5240 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q580V1
#21: Protein/peptide ms57


Mass: 45956.293 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.6.2080 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q584U8
#22: Protein/peptide ms58


Mass: 35623.910 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.70.3840 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38BP1
#23: Protein/peptide ms67


Mass: 30096.051 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.6.4930 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q586G5
#24: Protein/peptide ms69


Mass: 21589.732 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.8.4550 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q57UZ6
#25: Protein/peptide ms70


Mass: 21247.398 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_XI11660 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: D0A8P6
#26: Protein/peptide ms71


Mass: 20093.227 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.2920 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q383G5
#27: Protein/peptide ms72


Mass: 19317.293 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.7.3240 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57YD4
#28: Protein/peptide uS3m


Mass: 9070.940 Da / Num. of mol.: 1 / Details: Mitochondrial gene MURF-5 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Gene: MURF5 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: E0A3K1
#29: Protein/peptide uS55m


Mass: 50147.355 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.70.0530 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q38AX6
#30: Protein/peptide bS6m


Mass: 18861.543 Da / Num. of mol.: 1 / Details: residues 105-114 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.70.4850 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38BW5
#31: Protein/peptide uS8m


Mass: 32766.459 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.389.0130 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q388R7
#32: Protein/peptide uS9m


Mass: 50201.016 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.8.3110 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q57W62
#33: Protein/peptide uS10m


Mass: 94351.039 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.5.4040 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57Z45
#34: Protein/peptide uS11m


Mass: 37925.910 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.406.0510 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q389T7
#35: Protein/peptide uS12


Mass: 10421.635 Da / Num. of mol.: 1
Details: Mitochondrial gene subject to RNA editing alternative start codon
Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Gene: RPS12 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: A0A0E3J9R6
#36: Protein/peptide uS14m


Mass: 19900.014 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.8.1430 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q580I0
#37: Protein/peptide uS15m


Mass: 50401.191 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: TB927.1.1200 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q4GZ99
#38: Protein/peptide bS16m


Mass: 22077.805 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.02.5670 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q384N9
#39: Protein/peptide uS17m


Mass: 35632.727 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb09.211.2580 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38DP8
#40: Protein/peptide bS18m


Mass: 36988.691 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.6k15.3900 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38AS2
#41: Protein/peptide uS19m


Mass: 28364.604 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.6.2180 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q584T8
#42: Protein/peptide bS12m


Mass: 23087.889 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.3.4130 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q580M9
#43: Protein/peptide mt-IF-3


Mass: 41086.285 Da / Num. of mol.: 1 / Details: residues 294-304 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_VII1040 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister / References: UniProt: C9ZRZ4
#44: Protein/peptide mS22


Mass: 73064.141 Da / Num. of mol.: 1 / Details: residues 20-37 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb09.211.2430 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q38DR3
#45: Protein/peptide mS23


Mass: 36784.500 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.5.1510 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57VB2
#46: Protein/peptide mS26


Mass: 51136.684 Da / Num. of mol.: 1 / Details: residues 221-248 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb09.211.3000 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38DK6
#47: Protein/peptide mS29


Mass: 57048.836 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.6.1250 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q585C2
#48: Protein/peptide mS33


Mass: 21244.104 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.3.770 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57WW0
#49: Protein/peptide mS34


Mass: 28728.180 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.8.5280 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57UK0
#50: Protein/peptide mS35


Mass: 98377.773 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.47.0024 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q387C7
#51: Protein/peptide mS37


Mass: 24757.896 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.70.6600 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38C96
#52: Protein/peptide mS38


Mass: 28240.600 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.7.630 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57VQ9
#53: Protein/peptide ms34


Mass: 22421.469 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.26.0750 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q389L3
#54: Protein/peptide ms42


Mass: 29748.666 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Gene: TEOVI_000558800 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: A0A1G4I0W4, superoxide dismutase
#55: Protein/peptide mS43


Mass: 48590.410 Da / Num. of mol.: 1 / Details: residues 27-35 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.4.3690 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q585I1
#56: Protein/peptide mS47


Mass: 137935.000 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.1910 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q383R4
#58: Protein/peptide UNK


Mass: 443.539 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote)
#59: Protein/peptide UNK


Mass: 613.749 Da / Num. of mol.: 2 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#60: Protein/peptide UNK


Mass: 2741.370 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#61: Protein/peptide UNK


Mass: 698.854 Da / Num. of mol.: 3 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#62: Protein/peptide UNK


Mass: 4613.678 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#63: Protein/peptide UNK


Mass: 3762.629 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#64: Protein/peptide bL27m


Mass: 21793.092 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Gene: TEOVI_000532300 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: A0A1G4I8T3
#65: Protein/peptide bL28m


Mass: 28051.373 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.6.4040 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q586A2
#66: Protein/peptide uL29m


Mass: 54045.367 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb09.160.5240 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38EM7
#67: Protein/peptide uL30m


Mass: 25204.334 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_IX4520 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZY77
#68: Protein/peptide bL31m


Mass: 21083.229 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.6k15.1920 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38AB0
#69: Protein/peptide bL32m


Mass: 9745.710 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.4.2330 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q584F4
#70: Protein/peptide bL33m


Mass: 13042.740 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.4.1810 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q581Q0
#71: Protein/peptide bL35m


Mass: 21661.453 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_X2260 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: D0A1K1
#72: Protein/peptide bL36m


Mass: 21795.227 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_IV4820 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZMA9
#73: Protein/peptide uL3m


Mass: 55073.699 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.3.5610 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q580R4
#74: Protein/peptide uL4m


Mass: 53156.664 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Gene: TEOVI_000582800 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: A0A1G4HYD1
#75: Protein/peptide bL9m


Mass: 31032.697 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.5.3410 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57UC5
#76: Protein/peptide uL10m


Mass: 20283.566 Da / Num. of mol.: 1 / Details: residues 106-129 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_V3970 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZPD1
#77: Protein/peptide uL11m


Mass: 40252.750 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.2.4740, Tb927.2.4890 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q586R9
#79: Protein/peptide uL15m


Mass: 43780.016 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.5.3980 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57U68
#82: Protein/peptide bL19m


Mass: 16931.455 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: TB927.1.1210 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q4GZ98
#83: Protein/peptide bL20m


Mass: 24393.943 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.1930 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q383R2
#84: Protein/peptide bL21m


Mass: 20895.268 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_VII4650 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZT11
#85: Protein/peptide uL22m


Mass: 32083.285 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_VII3160 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZSI8
#86: Protein/peptide uL23m


Mass: 28822.936 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.03.0260 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q387G3
#87: Protein/peptide uL24m


Mass: 43999.047 Da / Num. of mol.: 1 / Details: residues 313-340 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_III1550 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZK52
#88: Protein/peptide mL38


Mass: 58437.895 Da / Num. of mol.: 1 / Details: residues 41-53 and 294-311 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.6620 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q381T7
#89: Protein/peptide mL40


Mass: 33646.066 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_X14530 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: D0A511
#90: Protein/peptide mL41


Mass: 22556.877 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_XI11060 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: D0A8I6
#91: Protein/peptide mL42


Mass: 21602.639 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.1840 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q383S1
#92: Protein/peptide mL43


Mass: 31300.406 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.4.4600 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q583E5
#93: Protein/peptide mL46


Mass: 33984.199 Da / Num. of mol.: 1 / Details: residues 149-159 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_VII5370 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZT91
#94: Protein/peptide mL49


Mass: 24501.486 Da / Num. of mol.: 1 / Details: residues 102-109 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.5.3110 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57Z82
#95: Protein/peptide mL52


Mass: 29175.984 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.02.2250 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q385V2
#96: Protein/peptide mL53


Mass: 35656.383 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.7.2990, Tb927.7.3030 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57YA9
#97: Protein/peptide mL63


Mass: 18213.924 Da / Num. of mol.: 1 / Details: residues 64-73 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_VII8230 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZU82
#98: Protein/peptide mL68


Mass: 28545.977 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.3500 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q383B7
#99: Protein/peptide bL12m


Mass: 3998.370 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote)
#100: Protein/peptide bL12m


Mass: 2008.194 Da / Num. of mol.: 2 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#101: Protein/peptide bL12m


Mass: 1937.116 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote)
#103: Protein/peptide mL67


Mass: 93569.273 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_XI1730 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: D0A5V6
#104: Protein/peptide mL68


Mass: 60896.355 Da / Num. of mol.: 1 / Details: residues 264-343 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.70.7650 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38CI0
#105: Protein/peptide mL69


Mass: 59010.855 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.6.2010 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q584V5
#106: Protein/peptide mL70


Mass: 62442.410 Da / Num. of mol.: 1 / Details: L1-stalk protein residues built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_VI3990 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZR91
#107: Protein/peptide mL71


Mass: 50313.797 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.7.3460 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57WG1
#108: Protein/peptide mL72


Mass: 49407.000 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_VI3710 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZR63
#109: Protein/peptide mL73


Mass: 41857.875 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.7.6800 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q57Y49
#110: Protein/peptide mL74


Mass: 39765.176 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.6k15.3290 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38AM5
#111: Protein/peptide mL75


Mass: 39841.617 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.70.7960 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q38CK0
#112: Protein/peptide mL76


Mass: 39638.914 Da / Num. of mol.: 1 / Details: residues 168-176 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.2340 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q383M2
#113: Protein/peptide mL77


Mass: 42731.605 Da / Num. of mol.: 1 / Details: residues 248-281 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_VI2240 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZQR6
#114: Protein/peptide mL78


Mass: 35104.535 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_X13360 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: D0A4P5
#115: Protein/peptide mL79


Mass: 33079.617 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.7140 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q381N5
#116: Protein/peptide mL80


Mass: 34252.094 Da / Num. of mol.: 1 / Details: residues 145-174 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.6.1440 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q585A3
#117: Protein/peptide mL81


Mass: 29284.467 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_XI6240 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: D0A755
#118: Protein/peptide mL82


Mass: 29283.676 Da / Num. of mol.: 1 / Details: residues 153-162 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_X19420 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: D0A0S6
#119: Protein/peptide mL83 / PPIase


Mass: 25579.004 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.7.3430 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57WF8, peptidylprolyl isomerase
#120: Protein/peptide mL84


Mass: 24773.643 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.6.4080 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q586A6
#121: Protein/peptide mL85


Mass: 18817.680 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb09.160.2250 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38FG8
#122: Protein/peptide mL86


Mass: 22376.191 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_V5660 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZPU8
#123: Protein/peptide mL87


Mass: 22337.521 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_XI9190 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: D0A7Z9
#124: Protein/peptide mL88


Mass: 22255.590 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_VIII1510 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: C9ZUW3
#125: Protein/peptide mL89


Mass: 22213.406 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.3.820 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57WW5
#126: Protein/peptide mL90


Mass: 22123.414 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.6.1700 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q585P1
#127: Protein/peptide mS91


Mass: 20618.520 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.3.5300 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q580U5
#128: Protein/peptide mL92 / PPIase


Mass: 20542.291 Da / Num. of mol.: 1 / Details: residues 46-64 built as polyalanines / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.1215 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q383Y4, peptidylprolyl isomerase
#129: Protein/peptide mL93


Mass: 17343.738 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: MHOM/CI/86/DAL972 / Gene: TbgDal_X13710 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: D0A4T0
#130: Protein/peptide mL94


Mass: 17830.959 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb09.160.5050 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q38EP7
#131: Protein/peptide mL95


Mass: 17803.377 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.26.0585 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q389K3
#132: Protein/peptide mL96


Mass: 16387.654 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb11.01.6285 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q381W9
#133: Protein/peptide mL97


Mass: 12974.785 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.61.3115 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: Q388L8
#134: Protein/peptide mL98


Mass: 12968.644 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb10.61.3155 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q388M2
#135: Protein/peptide mL99


Mass: 12334.969 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.2.2590 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q587H8
#136: Protein/peptide mL100


Mass: 10600.362 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Gene: TEOVI_000790200 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: A0A1G4HYZ0
#137: Protein/peptide UNK


Mass: 3932.839 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#138: Protein/peptide UNK


Mass: 3422.209 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote)
#139: Protein/peptide UNK


Mass: 1039.273 Da / Num. of mol.: 2 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#140: Protein/peptide UNK


Mass: 15081.565 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#141: Protein/peptide UNK


Mass: 1890.321 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote)
#142: Protein/peptide UNK


Mass: 2060.531 Da / Num. of mol.: 3 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#143: Protein/peptide UNK


Mass: 1464.797 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#144: Protein/peptide UNK


Mass: 869.063 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#145: Protein/peptide UNK


Mass: 1294.587 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#146: Protein/peptide UNK


Mass: 528.644 Da / Num. of mol.: 1 / Details: residues built as UNK / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427
#147: Protein/peptide UNK


Mass: 954.168 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427

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RNA chain , 2 types, 2 molecules CAAA

#57: RNA chain 9s rRNA


Mass: 198442.391 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: GenBank: 343546
#102: RNA chain 12S rRNA / MT-RNR1


Mass: 377015.625 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: GenBank: 343546

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50S ribosomal protein ... , 3 types, 3 molecules ANAQAR

#78: Protein/peptide 50S ribosomal protein L13, putative / Ribosome


Mass: 24341.309 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.4.1070 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q580D5
#80: Protein/peptide 50S ribosomal protein L16, putative / Ribosome


Mass: 19158.145 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.7.3960 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57UM6
#81: Protein/peptide 50S ribosomal protein L17, putative / Ribosome


Mass: 35117.824 Da / Num. of mol.: 1 / Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Strain: 927/4 GUTat10.1 / Gene: Tb927.8.5860 / Production host: Trypanosoma brucei brucei (eukaryote) / Strain (production host): Lister 427 / References: UniProt: Q57YI7

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Non-polymers , 9 types, 68 molecules

#148: Chemical
ChemComp-ZN / ZINC ION


Mass: 65.409 Da / Num. of mol.: 10 / Formula: Zn / Zinc
#149: Chemical
ChemComp-SPD / SPERMIDINE / N-(2-AMINO-PROPYL)-1,4-DIAMINOBUTANE / PA(34)


Mass: 145.246 Da / Num. of mol.: 4 / Formula: C7H19N3 / Spermidine
#150: Chemical ChemComp-UTP / URIDINE 5'-TRIPHOSPHATE


Mass: 484.141 Da / Num. of mol.: 1 / Formula: C9H15N2O15P3 / Uridine triphosphate / Comment: UTP *YM
#151: Chemical...
ChemComp-MG / MAGNESIUM ION


Mass: 24.305 Da / Num. of mol.: 46 / Formula: Mg / Magnesium
#152: Chemical ChemComp-GTP / GUANOSINE-5'-TRIPHOSPHATE


Mass: 523.180 Da / Num. of mol.: 1 / Formula: C10H16N5O14P3 / Guanosine triphosphate / Comment: GTP (energy-carrying molecule) *YM
#153: Chemical ChemComp-SPM / SPERMINE


Mass: 202.340 Da / Num. of mol.: 1 / Formula: C10H26N4 / Spermine
#154: Chemical ChemComp-NAD / NICOTINAMIDE-ADENINE-DINUCLEOTIDE


Mass: 663.425 Da / Num. of mol.: 1 / Formula: C21H27N7O14P2 / Nicotinamide adenine dinucleotide / Comment: NAD *YM
#155: Chemical ChemComp-SER / SERINE


Mass: 105.093 Da / Num. of mol.: 1 / Formula: C3H7NO3 / Serine
#156: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 3 / Formula: H2O / Water

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Experimental details

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Experiment

ExperimentMethod: ELECTRON MICROSCOPY
EM experimentAggregation state: PARTICLE / Reconstruction method: single particle reconstruction

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Sample preparation

ComponentName: the complete T. brucei mitoribosome with its small and large subunits
Type: RIBOSOME
Entity ID: 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,71,72,73,74,75,76,77,78,79,80,81,82,83,84,85,86,87,88,89,90,91,92,93,94,95,96,97,98,99,100,101,102,103,104,105,106,107,108,109,110,111,112,113,114,115,116,117,118,119,120,121,122,123,124,125,126,127,128,129,130,131,132,133,134,135,136,137,138,139,140,141,142,143,144,145,146,147
Source: NATURAL
Molecular weightValue: 4.5 MDa / Experimental value: YES
Source (natural)Organism: Trypanosoma brucei brucei (eukaryote) / Strain: Lister 427
Buffer solutionpH: 7.4
SpecimenEmbedding applied: NO / Shadowing applied: NO / Staining applied: NO / Vitrification applied: YES
VitrificationInstrument: FEI VITROBOT MARK IV / Cryogen name: ETHANE-PROPANE / Humidity: 98 % / Chamber temperature: 278 kelvins

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Electron microscopy imaging

Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company
MicroscopyMicroscope model: FEI TITAN KRIOS
Electron gunElectron source: FIELD EMISSION GUN / Accelerating voltage: 300 kV / Illumination mode: FLOOD BEAM
Electron lensMode: BRIGHT FIELDBright-field microscopy
Image recordingElectron dose: 40 e/Å2 / Detector mode: INTEGRATING / Film or detector model: FEI FALCON III (4k x 4k)

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Processing

EM software
IDNameCategory
1EMANparticle selection
4CTFFINDCTF correction
7UCSF Chimeramodel fitting
11RELIONclassification
12RELION3D reconstruction
CTF correctionType: PHASE FLIPPING AND AMPLITUDE CORRECTION
3D reconstructionResolution: 7.8 Å / Resolution method: FSC 0.143 CUT-OFF / Number of particles: 7141 / Algorithm: FOURIER SPACE / Symmetry type: POINT
Atomic model buildingRef protocol: RIGID BODY FIT

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