[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 85 items for (author: prakash & l)

EMDB-54924:
Chromosomal Passenger Complex in complex with H3T3ph Nucleosome
Method: single particle / : Gireesh A, Abad MA, Sotelo-Parrilla P, Jeyaprakash AA

EMDB-54926:
Chromosomal Passenger Complex in complex with H3T3ph Nucleosome (Class0)
Method: single particle / : Gireesh A, Abad MA, Sotelo-Parrilla P, Jeyaprakash AA

EMDB-54938:
Chromosomal Passenger Complex in complex with H3T3ph Nucleosome (Class1)
Method: single particle / : Gireesh A, Abad MA, Sotelo-Parrilla P, Jeyaprakash AA

EMDB-55003:
Chromosomal Passenger Complex in complex with H3T3ph Nucleosome (Double Occupancy)
Method: single particle / : Gireesh A, Abad MA, Sotelo-Parrilla P, Jeyaprakash AA

EMDB-55012:
Chromosomal Passenger Complex in complex with H3T3ph Nucleosome (Double Occupancy map)
Method: single particle / : Gireesh A, Abad MA, Sotelo-Parrilla P, Jeyaprakash AA

PDB-9si3:
Chromosomal Passenger Complex in complex with H3T3ph Nucleosome
Method: single particle / : Gireesh A, Abad MA, Sotelo-Parrilla P, Jeyaprakash AA

PDB-9si9:
Chromosomal Passenger Complex in complex with H3T3ph Nucleosome (Class0)
Method: single particle / : Gireesh A, Abad MA, Sotelo-Parrilla P, Jeyaprakash AA

PDB-9sj5:
Chromosomal Passenger Complex in complex with H3T3ph Nucleosome (Class1)
Method: single particle / : Gireesh A, Abad MA, Sotelo-Parrilla P, Jeyaprakash AA

PDB-9slj:
Chromosomal Passenger Complex in complex with H3T3ph Nucleosome (Double Occupancy)
Method: single particle / : Gireesh A, Abad MA, Sotelo-Parrilla P, Jeyaprakash AA

EMDB-18060:
CryoEM structure of canonical rice nucleosome core particle
Method: single particle / : Sotelo-Parrilla P, Hari Sundar G V, Raju S, Jha S, Gireesh A, Gut F, Vinothkumar KR, Berger F, Shivaprasad PV, Jeyaprakash AA

EMDB-18061:
CryoEM structure of rice nucleosome containing a H4 variant chimera
Method: single particle / : Sotelo-Parrilla P, Hari Sundar G V, Raju S, Jha S, Gireesh A, Gut F, Vinothkumar KR, Berger F, Shivaprasad PV, Jeyaprakash AA

PDB-8q15:
CryoEM structure of canonical rice nucleosome core particle
Method: single particle / : Sotelo-Parrilla P, Hari Sundar G V, Raju S, Jha S, Gireesh A, Gut F, Vinothkumar KR, Berger F, Shivaprasad PV, Jeyaprakash AA

PDB-8q16:
CryoEM structure of rice nucleosome containing a H4 variant chimera
Method: single particle / : Sotelo-Parrilla P, Hari Sundar G V, Raju S, Jha S, Gireesh A, Gut F, Vinothkumar KR, Berger F, Shivaprasad PV, Jeyaprakash AA

EMDB-45831:
CryoEM Structure of the human full length NAD Kinase
Method: single particle / : Li Y, Chen Z, Labesse G, Hoxhaj G

EMDB-45832:
CryoEM Structure of the C-terminally truncated form of human NAD Kinase
Method: single particle / : Li Y, Chen Z, Mary C, Labesse G, Hoxhaj G

EMDB-45856:
CryoEM Structure of the C-terminally truncated form of human NAD Kinase bound to NAD
Method: single particle / : Li Y, Chen Z, Mary C, Labesse G, Hoxhaj G

PDB-9cr3:
CryoEM Structure of the human full length NAD Kinase
Method: single particle / : Li Y, Chen Z, Labesse G, Hoxhaj G

PDB-9cr4:
CryoEM Structure of the C-terminally truncated form of human NAD Kinase
Method: single particle / : Li Y, Chen Z, Mary C, Labesse G, Hoxhaj G

PDB-9cra:
CryoEM Structure of the C-terminally truncated form of human NAD Kinase bound to NAD
Method: single particle / : Li Y, Chen Z, Mary C, Labesse G, Hoxhaj G

EMDB-19057:
human TRPM4 in SMA apo
Method: single particle / : Ekundayo B, Prakash A, Christian G, Anne FH, Sabrina G, Mey B, Daniela R, Martin L, Jean SR, Henning S, Hugues A, Dongchun N

EMDB-19061:
human TRPM4 in SMA IBA
Method: single particle / : Ekundayo B, Prakash A, Christian G, Anne FH, Sabrina G, Mey B, Daniela R, Martin L, Jean SR, Henning S, Hugues A, Dongchun N

EMDB-19069:
human TRPM4 in SMA NBA
Method: single particle / : Ekundayo B, Prakash A, Christian G, Anne FH, Sabrina G, Mey B, Daniela R, Martin L, Jean SR, Henning S, Hugues A, Dongchun N

EMDB-19074:
mouse TRPM4 with ligand DDM/CHS
Method: single particle / : Ekundayo B, Prakash A, Christian G, Anne FH, Sabrina G, Mey B, Daniela R, Martin L, Jean SR, Henning S, Hugues A, Dongchun N

PDB-8rcr:
human TRPM4 in SMA apo
Method: single particle / : Ekundayo B, Prakash A, Christian G, Anne FH, Sabrina G, Mey B, Daniela R, Martin L, Jean SR, Henning S, Hugues A, Dongchun N

PDB-8rcu:
human TRPM4 in SMA IBA
Method: single particle / : Ekundayo B, Prakash A, Christian G, Anne FH, Sabrina G, Mey B, Daniela R, Martin L, Jean SR, Henning S, Hugues A, Dongchun N

PDB-8rd9:
human TRPM4 in SMA NBA
Method: single particle / : Ekundayo B, Prakash A, Christian G, Anne FH, Sabrina G, Mey B, Daniela R, Martin L, Jean SR, Henning S, Hugues A, Dongchun N

EMDB-42839:
Structure of UT14 Fab in complex with the head domain of H3 (A/Singapore/INFIMH-16-0019/2016)
Method: single particle / : Park J, Georgiou G

PDB-8uzc:
Structure of UT14 Fab in complex with the head domain of H3 (A/Singapore/INFIMH-16-0019/2016)
Method: single particle / : Park J, Georgiou G

EMDB-19060:
HTRPM4-NBA
Method: single particle / : Ekundayo B, Prakash A, Christian G, Anne FH, Sabrina G, Mey B, Daniela R, Martin L, Jean SR, Henning S, Hugues A, Dongchun N

EMDB-19072:
DDM/CHS HTRPM4
Method: single particle / : Ekundayo B, Prakash A, Christian G, Anne FH, Sabrina G, Mey B, Daniela R, Martin L, Jean SR, Henning S, Hugues A, Dongchun N

EMDB-19073:
human TRPM4 LMNG ligand CA
Method: single particle / : Ekundayo B, Prakash A, Christian G, Anne FH, Sabrina G, Mey B, Daniela R, Martin L, Jean SR, Henning S, Hugues A, Dongchun N

EMDB-50637:
Structure of the NbNRC2 hexameric resistosome
Method: single particle / : Webster MW, Madhuprakash J, Kamoun S

PDB-9fp6:
Structure of the NbNRC2 hexameric resistosome
Method: single particle / : Webster MW, Madhuprakash J, Kamoun S

EMDB-50218:
Negative staining EM map for Mis18 core complex
Method: single particle / : Jeyaprakash AA, Medina-Pritchard B

EMDB-50219:
Negative staining EM map for Mis18 core complex
Method: single particle / : Jeyaprakash AA, Medina-Pritchard B

EMDB-50220:
Negative staining EM map for Mis18 core complex
Method: single particle / : Jeyaprakash AA, Medina-Pritchard B

EMDB-41371:
Cryo-EM structure of the Rev1-Polzeta-DNA-dCTP complex
Method: single particle / : Malik R, Aggarwal AK

EMDB-41372:
Cryo-EM structure of Rev1(deltaN)-Polzeta-DNA-dCTP complex
Method: single particle / : Malik R, Aggarwal AK

PDB-8tlq:
Cryo-EM structure of the Rev1-Polzeta-DNA-dCTP complex
Method: single particle / : Malik R, Aggarwal AK

PDB-8tlt:
Cryo-EM structure of Rev1(deltaN)-Polzeta-DNA-dCTP complex
Method: single particle / : Malik R, Aggarwal AK

PDB-7uih:
PSMD2 Structure
Method: single particle / : Johnson MC, Bashore C, Ciferri C, Dueber EC

PDB-7ujd:
PSMD2 Structure bound to MC1 and Fab8/14
Method: single particle / : Johnson MC, Bashore C, Ciferri C, Dueber EC

EMDB-24742:
PSMD2 with bound macrocycle MC1
Method: single particle / : Johnson MC, Bashore C, Ciferri C, Dueber EC

EMDB-24743:
PSMD2
Method: single particle / : Johnson MC, Bashore C, Ciferri C, Dueber EC

EMDB-24793:
Structure of DNA polymerase zeta with mismatched DNA
Method: single particle / : Malik R, Ubarretxena IB

PDB-7s0t:
Structure of DNA polymerase zeta with mismatched DNA
Method: single particle / : Malik R, Ubarretxena IB, Aggarwal AK

EMDB-23717:
SARS-CoV-2 S-NTD + Fab CM25
Method: single particle / : Johnson NV, Mclellan JS

PDB-7m8j:
SARS-CoV-2 S-NTD + Fab CM25
Method: single particle / : Johnson NV, Mclellan JS

EMDB-22890:
Plasmodium falciparum RhopH complex in soluble form
Method: single particle / : Schureck MA, Darling JE

PDB-7kiy:
Plasmodium falciparum RhopH complex in soluble form
Method: single particle / : Schureck MA, Darling JE, Merk A, Subramaniam S, Desai SA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more