[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 219 items for (author: otten & r)

EMDB-80237:
A complex of PTH1R/Gs bound to a PTHrP analogue with five beta-amino acids
Method: single particle / : Cary BP, Wootten D, Sexton PM, Gellman SH, Wook TK, Shin J, Gerrard EJ

EMDB-80238:
A complex of PTH1R/Gs bound to a PTHrP analogue with three beta-amino acids
Method: single particle / : Cary BP, Wootten D, Sexton PM, Gellman SH, Wook TK, Shin J, Gerrard EJ

PDB-25nv:
A complex of PTH1R/Gs bound to a PTHrP analogue with five beta-amino acids
Method: single particle / : Cary BP, Wootten D, Sexton PM, Gellman SH, Wook TK, Shin J, Gerrard EJ

PDB-25nx:
A complex of PTH1R/Gs bound to a PTHrP analogue with three beta-amino acids
Method: single particle / : Cary BP, Wootten D, Sexton PM, Gellman SH, Wook TK, Shin J, Gerrard EJ

EMDB-68747:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

PDB-22xc:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

EMDB-48775:
Cryo-EM structure of GLP-1R-Gs complex with SRB103Q
Method: single particle / : Zhang X, Belousoff MJ, Wootten D, Sexton PM, Piper S

PDB-9n05:
Cryo-EM structure of GLP-1R-Gs complex with SRB103Q
Method: single particle / : Zhang X, Belousoff MJ, Wootten D, Sexton PM, Piper S

EMDB-48385:
CGRP Receptor in complex with C8 Minibinder
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

PDB-9mm5:
CGRP Receptor in complex with dC2_049
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

EMDB-71396:
Cryo-EM structure of the PAC1nR-VIP-Gs complex
Method: single particle / : Piper SJ, Lu J, Sexton P, Wootten D

EMDB-71397:
Cryo-EM structure of the PAC1sR-VIP-Gs complex
Method: single particle / : Piper SJ, Lu J, Sexton P, Wootten D

EMDB-71398:
Cryo-EM structure of the PAC1sR-PACAP27-Gs complex
Method: single particle / : Piper SJ, Sexton P, Wootten D

PDB-9p92:
Cryo-EM structure of the PAC1nR-VIP-Gs complex
Method: single particle / : Piper SJ, Lu J, Sexton P, Wootten D

PDB-9p93:
Cryo-EM structure of the PAC1sR-VIP-Gs complex
Method: single particle / : Piper SJ, Lu J, Sexton P, Wootten D

PDB-9p94:
Cryo-EM structure of the PAC1sR-PACAP27-Gs complex
Method: single particle / : Piper SJ, Sexton P, Wootten D

EMDB-47447:
Glucagon Like Peptide Receptor-1 (GLP1R) A316T mutant with GLP-1 peptide. Dominant negative Gs complex.
Method: single particle / : Deane-Alder K, Belousoff MJ, Wootten DL

PDB-9e2a:
Glucagon Like Peptide Receptor-1 (GLP1R) A316T mutant with GLP-1 peptide. Dominant negative Gs complex.
Method: single particle / : Deane-Alder K, Belousoff MJ, Wootten DL

EMDB-48424:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

PDB-9mni:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

EMDB-45087:
Cryo-EM structure of glucagon-like peptide-1 receptor (GLP-1R)-Gs complex with Exendin-phe1
Method: single particle / : Zhang X, Johnson R, Belousoff MJ, Danev R, Sexton PM, Wootten D

PDB-9c0k:
Cryo-EM structure of glucagon-like peptide-1 receptor (GLP-1R)-Gs complex with Exendin-phe1
Method: single particle / : Zhang X, Johnson R, Belousoff MJ, Danev R, Sexton PM, Wootten D

EMDB-45040:
Cryo-EM structure of glucagon-like peptide-1 receptor (GLP-1R)-Gs complex with Exendin-asp3
Method: single particle / : Zhang X, Johnson R, Belousoff MJ, Danev R, Sexton PM, Wootten D

PDB-9byo:
Cryo-EM structure of glucagon-like peptide-1 receptor (GLP-1R)-Gs complex with Exendin-asp3
Method: single particle / : Zhang X, Johnson R, Belousoff MJ, Danev R, Sexton PM, Wootten D

EMDB-44760:
Human Amylin1 Receptor in complex with Gs and cagrilintide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Sexton PM, Wootten DL

EMDB-44796:
Human Amylin2 Receptor in Complex with Gs and Cagrilintide
Method: single particle / : Cao J, Belousoff MJ, Wootten DL, Sexton PM, Johnson RM

EMDB-44904:
Human calcitonin Receptor in complex with Gs and cagrilintide in the bypass conformation
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Sexton PM, Wootten DL

EMDB-44905:
Human calcitonin Receptor in complex with Gs and cagrilintide in the bypass conformation (repeat)
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Sexton PM, Wootten DL

EMDB-44906:
Human calcitonin Receptor in complex with Gs and cagrilintide in the CT-like conformation
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Sexton PM, Wootten DL

PDB-9bp3:
Human Amylin1 Receptor in complex with Gs and cagrilintide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Sexton PM, Wootten DL

PDB-9bq3:
Human Amylin2 Receptor in Complex with Gs and Cagrilintide
Method: single particle / : Cao J, Belousoff MJ, Wootten DL, Sexton PM, Johnson RM

PDB-9bub:
Human calcitonin Receptor in complex with Gs and cagrilintide in the bypass conformation
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Sexton PM, Wootten DL

PDB-9buc:
Human calcitonin Receptor in complex with Gs and cagrilintide in the bypass conformation (repeat)
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Sexton PM, Wootten DL

PDB-9bud:
Human calcitonin Receptor in complex with Gs and cagrilintide in the CT-like conformation
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Sexton PM, Wootten DL

EMDB-50913:
Structure of human RNF213 bound to the secreted effector IpaH1.4 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50914:
Structure of human RNF213 bound to the secreted effector IpaH2.5 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50915:
Consensus refinement of the complex between human RNF213 and the secreted effector IpaH1.4 from Shigella flexneri
Method: single particle / : Nadenova K, Randow F

EMDB-50916:
Local refinement of the RNF213 CBM domain in the structure of human RNF213 bound to the secreted effector IpaH1.4 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50917:
Local refinement of the RNF213 stalk domain in the structure of human RNF213 bound to the secreted effector IpaH1.4 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50918:
Local refinement of the RNF213 ATPase domain in the structure of human RNF213 bound to the secreted effector IpaH1.4 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50919:
Local refinement of the RNF213 C-terminal and hinge domains in the structure of human RNF213 bound to the secreted effector IpaH1.4 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50920:
Local refinement of the RNF213 E3 module in the structure of human RNF213 bound to the secreted effector IpaH1.4 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50921:
Local refinement of the RNF213 RING domain and the IpaH1.4 LRR domain in the structure of human RNF213 bound to the secreted effector IpaH1.4 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50922:
Consensus refinement of the complex between human RNF213 and the secreted effector IpaH2.5 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50923:
Local refinement of the RNF213 CBM domain in the structure of human RNF213 bound to the secreted effector IpaH2.5 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50924:
Local refinement of the RNF213 stalk domain in the structure of human RNF213 bound to the secreted effector IpaH2.5 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50925:
Local refinement of the RNF213 ATPase domain in the structure of human RNF213 bound to the secreted effector IpaH2.5 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50926:
Local refinement of the RNF213 C-terminal and hinge domains in the structure of human RNF213 bound to the secreted effector IpaH2.5 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50928:
Local refinement of the RNF213 E3 module in the structure of human RNF213 bound to the secreted effector IpaH2.5 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

EMDB-50929:
Local refinement of the RNF213 RING domain and the IpaH2.5 LRR domain in the structure of human RNF213 bound to the secreted effector IpaH2.5 from Shigella flexneri
Method: single particle / : Naydenova K, Randow F

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more