[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 80 items for (author: ohi & md)

EMDB-70677:
Cryo-EM structure of Candida albicans fluoride channel FEX in complex with Fab fragment
Method: single particle / : Kang CY, An MJ, Ohi MD, Stockbridge RB

EMDB-71090:
Nanodisc-embedded human TF/FVIIa/XK1 in complex with 10H10 Fab (nanodisc-subtracted)
Method: single particle / : Photenhauer AL, Sedzro JC, Ohi MD, Morrissey JH

EMDB-71093:
Nanodisc-embedded human TF/FVIIa/XK1 in complex with 10H10 Fab
Method: single particle / : Photenhauer AL, Sedzro JC, Morrissey JH, Ohi MD

EMDB-71094:
Nanodisc-embedded human TF/FVIIa/XK1
Method: single particle / : Photenhauer AL, Sedzro JC, Ohi MD, Morrissey JH

EMDB-71095:
Nanodisc-embedded human TF/FVIIa/XK1 in complex with 10H10 Fab (3D Flexible Refinement)
Method: single particle / : Photenhauer AL, Sedzro JC, Morrissey JH, Ohi MD

EMDB-70321:
Cryo-EM Structure of the Legionella pneumophila delta dis3 OMC
Method: single particle / : Roberts JR

EMDB-70322:
Cryo-EM Structure of the Legionella pneumophila delta dis3 PR
Method: single particle / : Roberts JR

EMDB-70323:
Cryo-EM Structure of the Legionella pneumophila delta dis2 OMC
Method: single particle / : Roberts JR

EMDB-70324:
Cryo-EM Structure of the Legionella pneumophila delta dis2 PR
Method: single particle / : Roberts JR

EMDB-47022:
CryoEM structure of the Strongylocentrotus purpuratus caveolin complex
Method: single particle / : Connolly SM, Ohi MD

EMDB-47023:
CryoEM structure of the Salpingoeca rosetta caveolin complex
Method: single particle / : Connolly SM, Ohi MD

EMDB-46969:
Cholinephosphotransferase in complex with diacylglycerol in nanodisc
Method: single particle / : Roberts JR, Maeda S, Ohi MD

EMDB-42496:
Cholinephosphotransferase in complex with CDP-choline and phosphatidylcholine
Method: single particle / : Roberts JR, Maeda S, Ohi MD

EMDB-42500:
Cholinephosphotransferase in complex with selective inhibitor chelerythrine
Method: single particle / : Roberts JR, Maeda S, Ohi MD

EMDB-42357:
Cholinephosphotransferase in complex with diacylglycerol
Method: single particle / : Roberts JR, Maeda S, Ohi MD

EMDB-44812:
RO76 bound muOR-Gi1-scFv16 complex structure
Method: single particle / : Wang H, Majumdar S, Kobilka BK

PDB-9bqj:
RO76 bound muOR-Gi1-scFv16 complex structure
Method: single particle / : Wang H, Majumdar S, Kobilka BK

EMDB-44587:
Cryo-EM Structure of the Helicobacter pylori dcagT PR
Method: single particle / : Roberts JR

EMDB-42290:
Cryo-EM Structure of the Helicobacter pylori CagYdAP OMC
Method: single particle / : Roberts JR

EMDB-42393:
Cryo-EM Structure of the Helicobacter pylori dcagM PR
Method: single particle / : Roberts JR

EMDB-42392:
Cryo-EM Structure of the Helicobacter pylori cagYdAP PR
Method: single particle / : Roberts JR

EMDB-43271:
Cryo-EM structure of the Helicobacter pylori VacA hexamer that was detergent solubilized from membrane, C6 symmetry applied
Method: single particle / : Connolly SM, Ohi MD

EMDB-43272:
Cryo-EM structure of Helicobacter pylori VacA hexamer that was detergent solubilized form membrane, no symmetry applied
Method: single particle / : Connolly SM, Ohi MD

EMDB-42990:
DNA initiation complex (configuration 1) of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Durie CL, Ohi MD, Chazin WJ, Eichman BF

EMDB-42991:
DNA initiation complex (configuration 2) of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Durie CL, Ohi MD, Chazin WJ, Eichman BF

EMDB-42992:
DNA elongation complex (configuration 1) of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Durie CL, Ohi MD, Chazin WJ, Eichman BF

EMDB-42993:
DNA elongation complex (configuration 2) of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Durie CL, Ohi MD, Chazin WJ, Eichman BF

EMDB-42140:
Partial DNA termination subcomplex of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Chazin WJ, Eichman BF

EMDB-42141:
Complete DNA termination subcomplex 1 of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Chazin WC, Eichman BF

EMDB-42142:
Complete DNA termination subcomplex 2 of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Chazin WC, Eichman BF

EMDB-28845:
Cryo-EM consensus structure of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase minus preQ1 ligand
Method: single particle / : Porta JC, Chauvier A, Deb I, Ellinger E, Frank AT, Meze K, Ohi MD, Walter NG

EMDB-29640:
Cryo-EM structure of 3DVA component 0 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase minus preQ1 ligand
Method: single particle / : Porta JC, Chauvier A, Deb I, Ellinger E, Frank AT, Meze K, Ohi MD, Walter NG

EMDB-29676:
Cryo-EM structure of 3DVA component 1 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase minus preQ1 ligand
Method: single particle / : Porta JC, Chauvier A, Deb I, Ellinger E, Frank AT, Meze K, Ohi MD, Walter NG

EMDB-29683:
Cryo-EM structure of 3DVA component 2 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase minus preQ1 ligand
Method: single particle / : Porta JC, Chauvier A, Deb I, Ellinger E, Frank AT, Meze K, Ohi MD, Walter NG

EMDB-29732:
Cryo-EM consensus structure of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand
Method: single particle / : Porta JC, Chauvier A, Deb I, Ellinger E, Frank AT, Meze K, Ohi MD, Walter NG

EMDB-29812:
Cryo-EM structure of 3DVA component 0 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand
Method: single particle / : Porta JC, Chauvier A, Deb I, Ellinger E, Frank AT, Meze K, Ohi MD, Walter NG

EMDB-29859:
Cryo-EM structure of 3DVA component 1 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand
Method: single particle / : Porta JC, Ohi MD, Walter NG, Frank AT, Deb I, Meze K

EMDB-29862:
Partial auto-inhibitory complex of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Chazin WJ, Eichman BF

EMDB-29864:
Complete auto-inhibitory complex of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Chazin WJ, Eichman BF

EMDB-29871:
DNA initiation subcomplex of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Durie CL, Ohi MD, Chazin WJ, Eichman BF

EMDB-29872:
Partial DNA elongation subcomplex of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Durie CL, Ohi MD, Chazin WJ, Eichman BF

EMDB-29873:
Complete DNA elongation subcomplex of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Durie CL, Ohi MD, Chazin WJ, Eichman BF

EMDB-29888:
Tetramer core subcomplex (conformation 1) of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Chazin WJ, Eichman BF

EMDB-29889:
Tetramer core subcomplex (conformation 2) of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Chazin WJ, Eichman BF

EMDB-29891:
Tetramer core subcomplex (conformation 3) of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Chazin WJ, Eichman BF

EMDB-29886:
Partial DNA termination subcomplex of Xenopus laevis DNA polymerase alpha-primase
Method: single particle / : Mullins EA, Chazin WJ, Eichman BF

EMDB-25007:
CryoEM structure of the Caveolin-1 8S complex
Method: single particle / : Porta JP, Ohi MD

EMDB-24004:
Legionella pneumophila Dot/Icm T4SS C1 Reconstruction
Method: single particle / : Sheedlo MJ, Durie CL

EMDB-24005:
Legionella pneumophila Dot/Icm T4SS OMC
Method: single particle / : Sheedlo MJ, Durie CL

EMDB-24006:
Legionella pneumophila Dot/Icm T4SS PR
Method: single particle / : Sheedlo MJ, Durie CL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more