[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 232 items for (author: noi & k)

EMDB-70277:
The structure of TdfH from Neisseria gonorrhoeae
Method: single particle / : Bera A, Noinaj N

PDB-9oaa:
The structure of TdfH from Neisseria gonorrhoeae
Method: single particle / : Bera A, Noinaj N

EMDB-53202:
Focused Cryo-EM Map of the Dimeric Type VIIb Core Unit (T7bCU) with an additional YukB DUF and stalk domain
Method: single particle / : Oka GU, Fronzes R

EMDB-53218:
Focused Cryo-EM Map of the Dimeric Type VIIb Core Unit (T7bCU)
Method: single particle / : Oka GU, Fronzes R

EMDB-53219:
Focused Cryo-EM Map of the Type VIIb Core Unit (T7bCU) with an Additional YukB DUF and Stalk Domain
Method: single particle / : Oka GU, Fronzes R

EMDB-53220:
B subtilis Type VIIb Core Unit (T7bCU) + DUF
Method: single particle / : Oka GU, Fronzes R

PDB-9qks:
B subtilis Type VIIb Core Unit (T7bCU) + DUF
Method: single particle / : Oka GU, Fronzes R

EMDB-72200:
Structure of LarA-like nickel-pincer nucleotide cofactor-utilizing enzyme with a single catalytic histidine residue from Streptococcus plurextorum
Method: single particle / : Subramanian S, Gatreddi S, Hausinger RP, Hu J, Parent KN

PDB-9q3k:
Structure of LarA-like nickel-pincer nucleotide cofactor-utilizing enzyme with a single catalytic histidine residue from Streptococcus plurextorum
Method: single particle / : Subramanian S, Gatreddi S, Hausinger RP, Hu J, Parent KN

EMDB-45442:
Fusobacterium nucleatum BamA-Fab 9 complex
Method: single particle / : Overly Cottom C, Noinaj N

PDB-9ccg:
Fusobacterium nucleatum BamA-Fab 9 complex
Method: single particle / : Overly Cottom C, Noinaj N

EMDB-72199:
Structures of LarA-like nickel-pincer nucleotide cofactor-utilizing enzyme with a single catalytic histidine residue from Blautia wexlerae
Method: single particle / : Subramanian S, Gatreddi S, Hausinger RP, Hu J, Parent KN

PDB-9q3j:
Structures of LarA-like nickel-pincer nucleotide cofactor-utilizing enzyme with a single catalytic histidine residue from Blautia wexlerae
Method: single particle / : Subramanian S, Gatreddi S, Hausinger RP, Hu J, Parent KN

EMDB-45754:
The cryo-EM structure of BamACDE complex from Neisseria gonorrhoeae
Method: single particle / : Billings EM, Noinaj N

EMDB-45755:
The cryo-EM structure of BamADE subcomplex from Neisseria gonorrhoeae
Method: single particle / : Billings EM, Noinaj N

EMDB-45756:
The cryo-EM structure of BamAD subcomplex from Neisseria gonorrhoeae
Method: single particle / : Billings EM, Noinaj N

PDB-9cmw:
The cryo-EM structure of BamACDE complex from Neisseria gonorrhoeae
Method: single particle / : Billings EM, Noinaj N

PDB-9cn0:
The cryo-EM structure of BamADE subcomplex from Neisseria gonorrhoeae
Method: single particle / : Billings EM, Noinaj N

PDB-9cn1:
The cryo-EM structure of BamAD subcomplex from Neisseria gonorrhoeae
Method: single particle / : Billings EM, Noinaj N

EMDB-19880:
Cryo-EM structure of human apoferritin (grid prepared with EasyGrid technology)
Method: single particle / : Gemin O, Mattei S, Papp G

EMDB-51634:
PfMSP3 in complex with mAb MP3.01
Method: single particle / : Bjoernsson KH, Barfod L, Ward AB

EMDB-37751:
Cryo-EM structure of T. pseudonana PyShell helical tube
Method: helical / : Kawamoto A, Tohda R, Gerle C, Kurisu G

PDB-8wqp:
Cryo-EM structure of T. pseudonana PyShell helical tube
Method: helical / : Kawamoto A, Tohda R, Gerle C, Kurisu G

EMDB-18709:
Subtomogram average of the T. pseudonana PyShell
Method: subtomogram averaging / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-18710:
Tomogram of P. tricornutum pyrenoid
Method: electron tomography / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-18711:
Tomogram of T. pseudonana pyrenoid
Method: electron tomography / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-18712:
Tomogram of PyShell mutant (M1) T. pseudonana
Method: electron tomography / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-18713:
Tomogram of PyShell mutant (M2) T. pseudonana
Method: electron tomography / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-18841:
Tomogram of T. pseudonana pyrenoid used for subtomogram avergaing
Method: electron tomography / : Demulder M, Righetto RD, Wietrzynski W, Lamm L, Engel BD

EMDB-40682:
The cryo-EM structure of the EcBAM/EspP(beta1-12) complex
Method: single particle / : Wu R, Noinaj N

EMDB-40700:
The cryo-EM structure of the EcBAM/EspP(beta8-12) complex
Method: single particle / : Wu R, Noinaj N

EMDB-40701:
The cryo-EM structure of the EcBAM/EspP(beta7-12) complex
Method: single particle / : Wu R, Noinaj N

EMDB-18942:
Structure of coxsackievirus B5 capsid (mutant CVB5F.cas.genogroupB) - F particle
Method: single particle / : Kumar K, Antanasijevic A

EMDB-18943:
Structure of coxsackievirus B5 capsid (mutant CVB5F.cas.genogroupB) - A particle
Method: single particle / : Kumar K, Antanasijevic A

EMDB-18944:
Structure of coxsackievirus B5 capsid (mutant CVB5F.cas.genogroupB) - E particle
Method: single particle / : Kumar K, Antanasijevic A

PDB-8r5x:
Structure of coxsackievirus B5 capsid (mutant CVB5F.cas.genogroupB) - F particle
Method: single particle / : Kumar K, Antanasijevic A

PDB-8r5y:
Structure of coxsackievirus B5 capsid (mutant CVB5F.cas.genogroupB) - A particle
Method: single particle / : Kumar K, Antanasijevic A

PDB-8r5z:
Structure of coxsackievirus B5 capsid (mutant CVB5F.cas.genogroupB) - E particle
Method: single particle / : Kumar K, Antanasijevic A

EMDB-19405:
Tomograms of spoIVB Bacillus subtilis sporangia
Method: electron tomography / : Bauda E, Gallet B, Moravcova J, Effantin G, Chan H, Novacek J, Jouneau PH, Rodrigues CDA, Schoehn G, Moriscot C, Morlot C

EMDB-19411:
Tomograms of cotE Bacillus subtilis sporangia
Method: electron tomography / : Bauda E, Gallet B, Moravcova J, Effantin G, Chan H, Novacek J, Jouneau PH, Rodrigues CDA, Schoehn G, Moriscot C, Morlot C

EMDB-17350:
Single particle cryo-EM co-structure of Klebsiella pneumoniae AcrB with the BDM91288 efflux pump inhibitor at 2.97 Angstrom resolution
Method: single particle / : Boernsen C, Mueller RT, Pos KM, Frangakis AS

PDB-8p1i:
Single particle cryo-EM co-structure of Klebsiella pneumoniae AcrB with the BDM91288 efflux pump inhibitor at 2.97 Angstrom resolution
Method: single particle / : Boernsen C, Mueller RT, Pos KM, Frangakis AS

EMDB-17865:
Tilapia Lake Virus polymerase in vRNA elongation state with additional mode B promoter (transcriptase conformation)
Method: single particle / : Arragain B, Cusack S

PDB-8psz:
Tilapia Lake Virus polymerase in vRNA elongation state with additional mode B promoter (transcriptase conformation)
Method: single particle / : Arragain B, Cusack S

EMDB-17857:
Tilapia Lake Virus polymerase in vRNA initiation state (transcriptase conformation)
Method: single particle / : Arragain B, Cusack S

EMDB-17858:
Tilapia Lake Virus polymerase in vRNA initiation state (core only)
Method: single particle / : Arragain B, Cusack S

EMDB-17860:
Tilapia Lake Virus polymerase in cRNA pre-initiation state mode A (core only)
Method: single particle / : Arragain B, Cusack S

EMDB-17861:
Tilapia Lake Virus polymerase in cRNA pre-initiation state mode B (core-endo only)
Method: single particle / : Arragain B, Cusack S

EMDB-17862:
Tilapia Lake Virus polymerase in vRNA pre-initiation state mode A (core only)
Method: single particle / : Arragain B, Cusack S

EMDB-17864:
Tilapia Lake Virus polymerase in vRNA elongation state (transcriptase conformation)
Method: single particle / : Arragain B, Cusack S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more