[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 40 items for (author: niemann & m)

EMDB-51002:
Untethered Cytoplasmic Fission Yeast Ribosome
Method: subtomogram averaging / : Rosa H, Gemin O, Gluc M, Mattei S, Jomaa A

EMDB-43970:
Non-translating Schizosaccharomyces pombe ribosome large subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43971:
Non-translating Schizosaccharomyces pombe ribosome small subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43972:
Non-translating S. pombe ribosome
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43973:
Non-translating S. pombe ribosome large subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43974:
Translating Schizosaccharomyces pombe ribosome small subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43975:
Translating Schizosaccharomyces pombe ribosome large subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-43976:
Translating S. pombe ribosome
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-50266:
Cytoplasmic Fission Yeast Ribosome Tethered to the Outer Mitochondrial Membrane
Method: subtomogram averaging / : Gemin O, Gluc M, Rosa H, Mattei S, Jomaa A

EMDB-51030:
Untethered Cytoplasmic Fission Yeast Ribosome (S. pombe)
Method: subtomogram averaging / : Rosa H, Gemin O, Gluc M, Mattei S, Jomaa A

PDB-9axt:
Non-translating S. pombe ribosome
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

PDB-9axu:
Non-translating S. pombe ribosome large subunit
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

PDB-9axv:
Translating S. pombe ribosome
Method: single particle / : Gluc M, Gemin O, Purdy M, Mattei S, Jomaa A

EMDB-13661:
Late assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Method: single particle / : Lenarcic T, Leibundgut M

PDB-7pub:
Late assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Method: single particle / : Lenarcic T, Leibundgut M, Saurer M, Ramrath DJF, Fluegel T, Boehringer D, Ban N

EMDB-13660:
Middle assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Method: single particle / : Lenarcic T, Leibundgut M

PDB-7pua:
Middle assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Method: single particle / : Lenarcic T, Leibundgut M, Saurer M, Ramrath DJF, Fluegel T, Boehringer D, Ban N

EMDB-10999:
State A of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Method: single particle / : Jaskolowski M, Ramrath DJF

EMDB-11000:
State B of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Method: single particle / : Jaskolowski M, Ramrath DJF

PDB-6yxx:
State A of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Method: single particle / : Jaskolowski M, Ramrath DJF, Bieri P, Niemann M, Mattei S, Calderaro S, Leibundgut MA, Horn EK, Boehringer D, Schneider A, Ban N

PDB-6yxy:
State B of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Method: single particle / : Jaskolowski M, Ramrath DJF, Bieri P, Niemann M, Mattei S, Calderaro S, Leibundgut MA, Horn EK, Boehringer D, Schneider A, Ban N

EMDB-10176:
mt-SSU assemblosome of wild-type Trypanosoma brucei brucei
Method: single particle / : Saurer M, Ramrath D, Niemann M, Calderaro S, Prange C, Mattei S, Scaiola A, Leitner A, Bieri P, Horn EK, Leibundgut M, Schneider A, Boehringer D, Ban N

EMDB-10178:
mt-SSU middle assembly intermediate of wild-type Trypanosoma brucei brucei
Method: single particle / : Saurer M, Ramrath D, Niemann M, Calderaro S, Prange C, Mattei S, Scaiola A, Leitner A, Bieri P, Horn EK, Leibundgut M, Schneider A, Boehringer D, Ban N

EMDB-10179:
mt-SSU late assembly intermediate of wild-type Trypanosoma brucei brucei
Method: single particle / : Saurer M, Ramrath D, Niemann M, Calderaro S, Prange C, Mattei S, Scaiola A, Leitner A, Bieri P, Horn EK, Leibundgut M, Schneider A, Boehringer D, Ban N

EMDB-10180:
mt-SSU assemblosome of Trypanosoma brucei
Method: single particle / : Saurer M, Ramrath DJF

PDB-6sgb:
mt-SSU assemblosome of Trypanosoma brucei
Method: single particle / : Saurer M, Ramrath DJF, Niemann M, Calderaro S, Prange C, Mattei S, Scaiola A, Leitner A, Bieri P, Horn EK, Leibundgut M, Boehringer D, Schneider A, Ban N

EMDB-10175:
Head domain of the mt-SSU assemblosome from Trypanosoma brucei
Method: single particle / : Saurer M, Ramrath DJF

EMDB-10177:
Body domain of the mt-SSU assemblosome from Trypanosoma brucei
Method: single particle / : Saurer M, Ramrath DJF

PDB-6sg9:
Head domain of the mt-SSU assemblosome from Trypanosoma brucei
Method: single particle / : Saurer M, Ramrath DJF, Niemann M, Calderaro S, Prange C, Mattei S, Scaiola A, Leitner A, Bieri P, Horn EK, Leibundgut M, Boehringer D, Schneider A, Ban N

PDB-6sga:
Body domain of the mt-SSU assemblosome from Trypanosoma brucei
Method: single particle / : Saurer M, Ramrath DJF, Niemann M, Calderaro S, Prange C, Mattei S, Scaiola A, Leitner A, Bieri P, Horn EK, Leibundgut M, Boehringer D, Schneider A, Ban N

EMDB-0229:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete mitoribosome
Method: single particle / : Ramrath DJF, Niemann M

PDB-6hiv:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete mitoribosome
Method: single particle / : Ramrath DJF, Niemann M, Leibundgut M, Bieri P, Prange C, Horn EK, Leitner A, Boerhringer D, Schneider A, Ban N

EMDB-0230:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete small mitoribosomal subunit in complex with mt-IF-3
Method: single particle / : Ramrath D, Niemann M

EMDB-0231:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the large mitoribosomal subunit
Method: single particle / : Ramrath DJF, Niemann M

EMDB-0232:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the body of the small mitoribosomal subunit in complex with mt-IF-3
Method: single particle / : Ramrath DJF, Niemann M

EMDB-0233:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the head of the small mitoribosomal subunit
Method: single particle / : Ramrath DJF, Niemann M

PDB-6hiw:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete small mitoribosomal subunit in complex with mt-IF-3
Method: single particle / : Ramrath D, Niemann M, Leibundgut M, Bieri P, Prange C, Horn EK, Leitner A, Boehringer D, Schneider A, Ban N

PDB-6hix:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the large mitoribosomal subunit
Method: single particle / : Ramrath DJF, Niemann M, Leibundgut M, Bieri P, Prange C, Horn K, Leitner A, Boehringer D, Schneider A, Ban N

PDB-6hiy:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the body of the small mitoribosomal subunit in complex with mt-IF-3
Method: single particle / : Ramrath DJF, Niemann M, Leibundgut M, Bieri P, Prange C, Horn EK, Leitner A, Boehringer D, Schneider A, Ban N

PDB-6hiz:
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the head of the small mitoribosomal subunit
Method: single particle / : Ramrath DJF, Niemann M, Leibundgut M, Bieri P, Prange C, Horn EK, Leitner A, Boehringer A, Schneider A, Ban N

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more