[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 55 items for (author: mera & c)

EMDB-44765:
Human DNA polymerase theta helicase domain in complex with inhibitor AB25583, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

EMDB-44766:
Human DNA polymerase theta helicase domain in complex with inhibitor AB25583, tetramer form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9bp9:
Human DNA polymerase theta helicase domain in complex with inhibitor AB25583, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9bpa:
Human DNA polymerase theta helicase domain in complex with inhibitor AB25583, tetramer form
Method: single particle / : Ito F, Li Z, Chen XS

EMDB-43706:
Human DNA polymerase theta helicase domain in complex with ssDNA, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

EMDB-43816:
Human DNA polymerase theta helicase domain in complex with AMP-PNP, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

EMDB-43817:
Human DNA polymerase theta helicase domain dimer, apo-form
Method: single particle / : Ito F, Li Z, Chen XS

EMDB-43818:
Human DNA polymerase theta helicase domain tetramer, apo-form
Method: single particle / : Ito F, Li Z, Chen XS

EMDB-45217:
Human DNA polymerase theta helicase domain in microhomology annealed state 1, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

EMDB-45218:
Human DNA polymerase theta helicase domain in microhomology annealed state 2, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-8w0a:
Human DNA polymerase theta helicase domain in complex with ssDNA, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9asj:
Human DNA polymerase theta helicase domain in complex with AMP-PNP, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9ask:
Human DNA polymerase theta helicase domain dimer, apo-form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9asl:
Human DNA polymerase theta helicase domain tetramer, apo-form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9c5q:
Human DNA polymerase theta helicase domain in microhomology annealed state 2, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

EMDB-17323:
Cryo-EM structure of Rotavirus B NSP2
Method: single particle / : Chamera S, Nowotny M

PDB-8p00:
Cryo-EM structure of Rotavirus B NSP2
Method: single particle / : Chamera S, Nowotny M

EMDB-40641:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) bound to the leader promoter
Method: single particle / : Cao D, Gao Y, Chen Z, Gooneratne I, Roesler C, Mera C, Liang B

EMDB-40642:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) bound to the trailer complementary promoter
Method: single particle / : Cao D, Gao Y, Chen Z, Gooneratne I, Roesler C, Mera C, Liang B

PDB-8snx:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) bound to the leader promoter
Method: single particle / : Cao D, Gao Y, Chen Z, Gooneratne I, Roesler C, Mera C, Liang B

PDB-8sny:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) bound to the trailer complementary promoter
Method: single particle / : Cao D, Gao Y, Chen Z, Gooneratne I, Roesler C, Mera C, Liang B

EMDB-18941:
SARS-CoV-2 S (Spike) protein (BA.1) in complex with VHH Ma16B06 (sub-volume of two adjacent RBD-VHH modules)
Method: single particle / : Guttler T, Aksu M, Gorlich D

EMDB-17804:
Bat-Hp-CoV Nsp1 and eIF1 bound to the human 40S small ribosomal subunit
Method: single particle / : Schubert K, Karousis ED, Ban I, Lapointe CP, Leibundgut M, Baeumlin E, Kummerant E, Scaiola A, Schoenhut T, Ziegelmueller J, Puglisi JD, Muehlemann O, Ban N

EMDB-17805:
MERS-CoV Nsp1 bound to the human 43S pre-initiation complex
Method: single particle / : Schubert K, Karousis ED, Ban I, Lapointe CP, Leibundgut M, Baeumlin E, Kummerant E, Scaiola A, Schoenhut T, Ziegelmueller J, Puglisi JD, Muehlemann O, Ban N

PDB-8ppk:
Bat-Hp-CoV Nsp1 and eIF1 bound to the human 40S small ribosomal subunit
Method: single particle / : Schubert K, Karousis ED, Ban I, Lapointe CP, Leibundgut M, Baeumlin E, Kummerant E, Scaiola A, Schoenhut T, Ziegelmueller J, Puglisi JD, Muehlemann O, Ban N

PDB-8ppl:
MERS-CoV Nsp1 bound to the human 43S pre-initiation complex
Method: single particle / : Schubert K, Karousis ED, Ban I, Lapointe CP, Leibundgut M, Baeumlin E, Kummerant E, Scaiola A, Schoenhut T, Ziegelmueller J, Puglisi JD, Muehlemann O, Ban N

EMDB-28022:
Adeno-associated virus type 2 VLP displaying M2 peptide
Method: single particle / : Hernandez C, Kopylov M

EMDB-28040:
Adeno-associated virus type 2 VLP displaying Linker peptide
Method: single particle / : Hernandez C, Kopylov M

EMDB-15231:
Complex of RecF and DNA from Thermus thermophilus.
Method: single particle / : Nirwal S, Czarnocki-Cieciura M, Chaudhary A, Zajko W, Skowronek K, Chamera S, Figiel M, Nowotny M

EMDB-15267:
Complex of RecF-RecR-DNA from Thermus thermophilus.
Method: single particle / : Nirwal S, Czarnocki-Cieciura M, Chaudhary A, Zajko W, Skowronek K, Chamera S, Figiel M, Nowotny M

EMDB-15308:
Complex of RecO-RecR-DNA from Thermus thermophilus.
Method: single particle / : Nirwal S, Czarnocki-Cieciura M, Chaudhary A, Zajko W, Skowronek K, Chamera S, Figiel M, Nowotny M

EMDB-16164:
Complex of RecF-RecO-RecR-DNA from Thermus thermophilus (low resolution reconstruction).
Method: single particle / : Nirwal S, Czarnocki-Cieciura M, Chaudhary A, Zajko W, Skowronek K, Chamera S, Figiel M, Nowotny M

PDB-8a8j:
Complex of RecF and DNA from Thermus thermophilus.
Method: single particle / : Nirwal S, Czarnocki-Cieciura M, Chaudhary A, Zajko W, Skowronek K, Chamera S, Figiel M, Nowotny M

PDB-8a93:
Complex of RecF-RecR-DNA from Thermus thermophilus.
Method: single particle / : Nirwal S, Czarnocki-Cieciura M, Chaudhary A, Zajko W, Skowronek K, Chamera S, Figiel M, Nowotny M

PDB-8ab0:
Complex of RecO-RecR-DNA from Thermus thermophilus.
Method: single particle / : Nirwal S, Czarnocki-Cieciura M, Chaudhary A, Zajko W, Skowronek K, Chamera S, Figiel M, Nowotny M

PDB-8bpr:
Complex of RecF-RecO-RecR-DNA from Thermus thermophilus (low resolution reconstruction).
Method: single particle / : Nirwal S, Czarnocki-Cieciura M, Chaudhary A, Zajko W, Skowronek K, Chamera S, Figiel M, Nowotny M

EMDB-22189:
R. capsulatus cyt bc1 (CIII2) at 3.3A
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

EMDB-22224:
R. capsulatus cyt bc1 with both FeS proteins in c position (CIII2 c-c)
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

EMDB-22225:
R. capsulatus cyt bc1 with one FeS protein in b position and one in c position (CIII2 b-c)
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

EMDB-22226:
R. capsulatus cyt bc1 with both FeS proteins in b position (CIII2 b-b)
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

EMDB-22227:
R. capsulatus CIII2CIV bipartite super-complex (SC-2A) with CcoH/cy
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

EMDB-22228:
R. capsulatus CIII2CIV tripartite super-complex, conformation A (SC-1A)
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

EMDB-22230:
R. capsulatus CIII2CIV tripartite super-complex, conformation B (SC-1B)
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

PDB-6xi0:
R. capsulatus cyt bc1 (CIII2) at 3.3A
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

PDB-6xkt:
R. capsulatus cyt bc1 with both FeS proteins in c position (CIII2 c-c)
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

PDB-6xku:
R. capsulatus cyt bc1 with one FeS protein in b position and one in c position (CIII2 b-c)
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

PDB-6xkv:
R. capsulatus cyt bc1 with both FeS proteins in b position (CIII2 b-b)
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

PDB-6xkw:
R. capsulatus CIII2CIV bipartite super-complex (SC-2A) with CcoH/cy
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

PDB-6xkx:
R. capsulatus CIII2CIV tripartite super-complex, conformation A (SC-1A)
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

PDB-6xkz:
R. capsulatus CIII2CIV tripartite super-complex, conformation B (SC-1B)
Method: single particle / : Steimle S, Van Eeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more