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Showing all 44 items for (author: marzi & s)

EMDB-63903:
FADD-DED filaments coordinate complex IIa assembly during TNF-induced apoptosis
Method: single particle / : Liu P, Luo D

EMDB-63933:
FADD-DED filaments coordinate complex IIa assembly during TNF-induced apoptosis
Method: single particle / : Liu P, Luo D

PDB-9u6e:
FADD-DED filaments coordinate complex IIa assembly during TNF-induced apoptosis
Method: single particle / : Liu P, Luo D

PDB-9u7a:
FADD-DED filaments coordinate complex IIa assembly during TNF-induced apoptosis
Method: single particle / : Liu P, Luo D

EMDB-12178:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (body only)
Method: single particle / : Belinite M, Khusainov I

EMDB-12179:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (head only)
Method: single particle / : Belinite M, Khusainov I, Marzi S, Romby P, Yusupov M, Hashem Y

PDB-7bgd:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (body only)
Method: single particle / : Belinite M, Khusainov I, Marzi S, Romby P, Yusupov M, Hashem Y

PDB-7bge:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (head only)
Method: single particle / : Belinite M, Khusainov I, Marzi S, Romby P, Yusupov M, Hashem Y

EMDB-12090:
Staphylococcus aureus 30S ribosomal subunit in absence of spermidine with fixed helix 44
Method: single particle / : Belinite M, Khusainov I, Marzi S, Romby P, Yusupov M, Hashem Y

EMDB-12091:
Staphylococcus aureus 30S ribosomal subunit in absence of spermidine with reoriented helix 44
Method: single particle / : Belinite M, Khusainov I, Marzi S, Romby P, Yusupov M, Hashem Y

EMDB-24533:
SARS-CoV-2 spike protein bound to the S2P6 and S2M11 Fab fragments
Method: single particle / : Sauer MM, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-24347:
SARS-CoV-2 S glycoprotein in complex with S2X259 Fab
Method: single particle / : Veesler D, Tortorici MA

EMDB-24365:
SARS-CoV-2 S bound to S2X259 Fab (local refinement of the RBD/S2X259 variable domains)
Method: single particle / : Veesler D, Tortorici MA

PDB-7ra8:
SARS-CoV-2 S glycoprotein in complex with S2X259 Fab
Method: single particle / : Veesler D, Tortorici MA, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-7ral:
SARS-CoV-2 S bound to S2X259 Fab (local refinement of the RBD/S2X259 variable domains)
Method: single particle / : Veesler D, Tortorici MA, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-24299:
SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment (local refinement of the RBD and S2D106)
Method: single particle / : Park YJ, Veesler D

EMDB-24300:
SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Veesler D

EMDB-24301:
SARS-CoV-2 spike glycoprotein ectodomain in complex with the S2H97 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Veesler D

PDB-7r7n:
SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment (local refinement of the RBD and S2D106)
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-12546:
Structure of the darobactin-bound E. coli BAM complex (BamABCDE)
Method: single particle / : Jakob RP, Kaur H

PDB-7nri:
Structure of the darobactin-bound E. coli BAM complex (BamABCDE)
Method: single particle / : Jakob RP, Kaur H, Marzinek JK, Green R, Imai Y, Bolla J, Robinson C, Bond PJ, Lewis K, Maier T, Hiller S

EMDB-30883:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 1 particle)
Method: single particle / : Fibriansah G, Ng TS

EMDB-30884:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 2 particle)
Method: single particle / : Fibriansah G, Ng TS

EMDB-30885:
Cryo-EM map of Dengue virus serotype 2 strain PVP94/07 in complex with human antibody 1C19 Fab at 37 deg C
Method: single particle / : Fibriansah G, Ng TS, Kostyuchenko VA, Shi J, Lok SM

EMDB-30886:
Cryo-EM map of Dengue virus serotype 2 strain PVP94/07 in complex with human antibody 1C19 Fab at 40 deg C
Method: single particle / : Fibriansah G, Ng TS, Kostyuchenko VA, Shi J, Lok SM

PDB-7dwt:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 1 particle)
Method: single particle / : Fibriansah G, Ng TS, Kostyuchenko VA, Shi J, Lok SM

PDB-7dwu:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 2 particle)
Method: single particle / : Fibriansah G, Ng TS, Kostyuchenko VA, Shi J, Lok SM

EMDB-23052:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine
Method: single particle / : Belinite M, Khusainov I

PDB-7kwg:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine
Method: single particle / : Belinite M, Khusainov I, Marzi S, Romby P, Yusupov M, Hashem Y

EMDB-9649:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 8.0.
Method: single particle / : Wirawan M, Fibriansah G

EMDB-9650:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class I particle)
Method: single particle / : Wirawan M, Fibriansah G

EMDB-9651:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class II particle)
Method: single particle / : Wirawan M, Fibriansah G

PDB-6idi:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 8.0.
Method: single particle / : Wirawan M, Fibriansah G, Ng TS, Zhang Q, Kostyuchenko VA, Shi J, Lok SM

PDB-6idk:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class I particle)
Method: single particle / : Wirawan M, Fibriansah G, Ng TS, Zhang Q, Kostyuchenko VA, Shi J, Lok SM

PDB-6idl:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class II particle)
Method: single particle / : Wirawan M, Fibriansah G, Ng TS, Zhang Q, Kostyuchenko VA, Shi J, Lok SM

EMDB-4050:
70S ribosome from Staphylococcus aureus
Method: single particle / : Khusainov I, Vicens Q

PDB-5li0:
70S ribosome from Staphylococcus aureus
Method: single particle / : Khusainov I, Vicens Q, Bochler A, Grosse F, Myasnikov A, Menetret JF, Chicher J, Marzi S, Romby P, Yusupova G, Yusupov M, Hashem Y

EMDB-2448:
Cryo-EM structure of T. thermophilus 30S Translation Initiation complex
Method: single particle / : Simonetti A, Marzi S, Billas IML, Tsai A, Fabbretti A, Myasnikov A, Roblin P, Vaiana AC, Hazemann I, Eiler D, Steitz TA, Puglisi JD, Gualerzi GO, Klaholz BP

PDB-3j4j:
Model of full-length T. thermophilus Translation Initiation Factor 2 refined against its cryo-EM density from a 30S Initiation Complex map
Method: single particle / : Simonetti A, Marzi S, Billas IML, Tsai A, Fabbretti A, Myasnikov A, Roblin P, Vaiana AC, Hazemann I, Eiler D, Steitz TA, Puglisi JD, Gualerzi CO, Klaholz BP

EMDB-1523:
Cryo-EM structure of prokaryotic 30S Translation Initiation Complex.
Method: single particle / : Simonetti A, Marzi S, Myasnikov AG, Fabbretti A, Yusupov M, Gualerzi CO, Klaholz BP

EMDB-1391:
Structured mRNAs regulate translation initiation by binding to the platform of the ribosome.
Method: single particle / : Marzi S

PDB-2vaz:
Model of the S15-mRNA complex fitted into the cryo-EM map of the 70S entrapment complex.
Method: single particle / : Marzi S, Myasnikov AG, Serganov A, Ehresmann C, Romby P, Yusupov M, Klaholz BP

EMDB-1172:
Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome.
Method: single particle / : Myasnikov AG, Marzi S, Simonetti A, Giuliodori AM, Gualerzi CO, Yusupova G, Yusupov M, Klaholz BP

EMDB-1173:
Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome.
Method: single particle / : Myasnikov AG, Marzi S, Simonetti A, Giuliodori AM, Gualerzi CO, Yusupova G, Yusupov M, Klaholz BP

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

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  • The previous official version 1.9 will be removed from the archive.

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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