[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,060 items for (author: marin & e)

EMDB-55043:
CM1-activated gTuRC in complex with nascent alpha-E254D mutant microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

EMDB-55044:
CM1-activated gTuRC in complex with nascent wildtype microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

PDB-9smx:
CM1-activated gTuRC in complex with nascent alpha-E254D mutant microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

EMDB-54176:
CryoEM structure of the spike S protein trimer of the omicron BA.1 variant prepared in the presence of compound II-Na salt
Method: single particle / : Llacer JL, Lopez ML

EMDB-54650:
Unliganded dimer - bacterial
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

EMDB-54651:
Unliganded tetramer of Glycogen phosphorylase from E. coli
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

EMDB-54663:
Complexed tetramer - bacterial
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

PDB-9s7v:
Structure of glycogen phosphorylase - dimeric form - from Escherichia coli
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

PDB-9s86:
Structure of glycogen phosphorylase - tetrameric form - from Escherichia coli
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

PDB-9s8b:
Structure of glycogen phosphorylase - dimeric form - in complex with HPr from Escherichia coli
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

PDB-9s8k:
Structure of glycogen phosphorylase - tetrameric form - in complex with HPr from Escherichia coli
Method: single particle / : Di Domenico V, Mastrella L, Alcaide-Jimenez A, Villegas-Ruiz JC, D'Angelo C, Cifuente JO, Connell SR, Guerin ME

EMDB-65924:
Cryo-EM structure of psXR
Method: single particle / : Murakoshi S, Marin MC, Tanaka T, Shihoya W, Beja O, Nureki O

PDB-9wfa:
Cryo-EM structure of psXR
Method: single particle / : Murakoshi S, Marin MC, Tanaka T, Shihoya W, Beja O, Nureki O

EMDB-74981:
The ER membrane protein complex acts as a chaperone to promote voltage-gated calcium channel assembly
Method: single particle / : Singal B, Biswal M, Pleiner T

PDB-9zz6:
The ER membrane protein complex acts as a chaperone to promote voltage-gated calcium channel assembly
Method: single particle / : Singal B, Biswal M, Pleiner T

EMDB-52020:
Cryo-EM consensus map of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52021:
Cryo-EM focused refined map of the canine distemper virus dimer II region of the tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52023:
Cryo-EM focused refined map of the canine distemper virus dimer I region of the tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-52024:
Cryo-EM structure of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

PDB-9hbp:
Cryo-EM structure of the canine distemper virus tetrameric attachment H glycoprotein in complex with two different Nanobodies
Method: single particle / : Djabeur N, Jeckelmann JM, Fotiadis D

EMDB-70338:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

EMDB-71715:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71727:
West Nile virus E protein
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71728:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9od2:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

PDB-9pl9:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9pm6:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP
Method: single particle / : Lin RN, Torres JL, Tran AS, Ozorowski G, Ward AB

EMDB-51635:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

PDB-9gvg:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

EMDB-55527:
Early Expressome Composite Map of TEC and 30S IC
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55528:
Early Expressome Consensus Refinement
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55529:
Early Expressome RNAP/TEC body
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55530:
E. coli 30S IC containing mRNA, IF1 and IF3
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55531:
E. coli 30S IC containing mRNA, initiator tRNA, IF1 and IF2
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-49930:
Cryo-EM structure of the glycosyltransferase GtrB in the substrate-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, Bhattacharjee B, di Muccio G, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49931:
Cryo-EM structure of the glycosyltransferase GtrB in the pre-catalysis and product-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49932:
Cryo-EM structure of the glycosyltransferase GtrB in the apo state (octamer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49933:
Cryo-EM structure of the glycosyltransferase GtrB (tetramer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-49935:
Cryo-EM structure of the glycosyltransferase GtrB in the pre-intermediate state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nyc:
Cryo-EM structure of the glycosyltransferase GtrB in the substrate-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, Bhattacharjee B, di Muccio G, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nyd:
Cryo-EM structure of the glycosyltransferase GtrB in the pre-catalysis and product-bound state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nye:
Cryo-EM structure of the glycosyltransferase GtrB in the apo state (octamer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nyf:
Cryo-EM structure of the glycosyltransferase GtrB (tetramer volume)
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

PDB-9nyk:
Cryo-EM structure of the glycosyltransferase GtrB in the pre-intermediate state
Method: single particle / : Morgan RT, Motta S, Gil-Iturbe E, di Muccio G, Bhattacharjee B, Romagnoli A, Anwar MT, Mishra B, Ashraf K, Bang I, di Marino D, Lowary TL, Quick M, Petrou VI, Stowell MHB, Nygaard R, Mancia F

EMDB-55504:
Nonameric Ena1C ring of Bacillus cereus
Method: single particle / : Sleutel M, Remaut H

PDB-9t3p:
Nonameric Ena1C ring of Bacillus cereus
Method: single particle / : Sleutel M, Remaut H

EMDB-48331:
Structure of the Respiratory Syncytial Virus Fusion Protein Bound to Human Antibodies RSV_2245 and RSV_3301
Method: single particle / : Johnson NV, McLellan JS

PDB-9mkn:
Structure of the Respiratory Syncytial Virus Fusion Protein Bound to Human Antibodies RSV_2245 and RSV_3301
Method: single particle / : Johnson NV, McLellan JS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more