[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 444 items for (author: ma & sf)

EMDB-41570:
Cryo-EM structure of the rat P2X7 receptor in the apo closed state
Method: single particle / : Oken AC, Lisi NE, Krishnamurthy I, McCarthy AE, Godsey MH, Glasfeld A, Mansoor SE

EMDB-41581:
Cryo-EM structure of the rat P2X7 receptor in complex with the high-affinity agonist BzATP
Method: single particle / : Oken AC, Lisi NE, Krishnamurthy I, McCarthy AE, Godsey MH, Glasfeld A, Mansoor SE

EMDB-42976:
Cryo-EM structure of the rat P2X7 receptor in the apo closed state purified in the absence of sodium
Method: single particle / : Oken AC, Lisi NE, Krishnamurthy I, McCarthy AE, Godsey MH, Glasfeld A, Mansoor SE

PDB-8tr5:
Cryo-EM structure of the rat P2X7 receptor in the apo closed state
Method: single particle / : Oken AC, Lisi NE, Krishnamurthy I, McCarthy AE, Godsey MH, Glasfeld A, Mansoor SE

PDB-8trj:
Cryo-EM structure of the rat P2X7 receptor in complex with the high-affinity agonist BzATP
Method: single particle / : Oken AC, Lisi NE, Krishnamurthy I, McCarthy AE, Godsey MH, Glasfeld A, Mansoor SE

PDB-8v4s:
Cryo-EM structure of the rat P2X7 receptor in the apo closed state purified in the absence of sodium
Method: single particle / : Oken AC, Lisi NE, Krishnamurthy I, McCarthy AE, Godsey MH, Glasfeld A, Mansoor SE

EMDB-43779:
Rat GluN1-GluN2B NMDA receptor channel in complex with glycine, glutamate, and EU-1622-A, in open-channel conformation
Method: single particle / : Chou TH, Furukawa H

EMDB-43780:
Rat GluN1-GluN2B NMDA receptor channel in complex with glycine, glutamate, and EU-1622-A, in nonactive1 conformation
Method: single particle / : Chou TH, Furukawa H

EMDB-43781:
Rat GluN1-GluN2B NMDA receptor channel in apo conformation
Method: single particle / : Chou TH, Furukawa H

EMDB-43782:
Rat GluN1-GluN2B NMDA receptor channel in complex with glycine
Method: single particle / : Chou TH, Furukawa H

EMDB-43783:
Rat GluN1-GluN2B NMDA receptor channel in complex with glutamate
Method: single particle / : Chou TH, Furukawa H

EMDB-44586:
Rat GluN1-GluN2B NMDA receptor channel in complex with glycine, glutamate, and EU-1622-A, in open-channel conformation, C1 symmetry
Method: single particle / : Chou TH, Furukawa H

EMDB-43746:
Plasmodium falciparum 20S proteasome bound to an inhibitor
Method: single particle / : Han Y, Deng X, Ray S, Chen Z, Phillips M

EMDB-19822:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/+bromosterol (DOPC, DOPE, DOPS, bromo-ergosterol, PI(4,5)P2 35:20:20:15:10)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-18307:
Native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Loewith RJ, Defosses A

EMDB-18308:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture -PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol 30:20:20:30)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-18309:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/-sterol (DOPC, DOPE, DOPS, PI(4,5)P2 50:20:20:10)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-18310:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol, PI(4,5)P2 35:20:20:15:10)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-18311:
Compact state - Native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-18312:
Stretched state - Native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qb7:
Pil1 in native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Loewith RJ, Defosses A

PDB-8qb8:
Lsp1 in native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Loewith RJ, Defosses A

PDB-8qb9:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture -PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol 30:20:20:30)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qbb:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/-sterol (DOPC, DOPE, DOPS, PI(4,5)P2 50:20:20:10)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qbd:
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol, PI(4,5)P2 35:20:20:15:10)
Method: helical / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qbe:
Compact state - Pil1 in native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qbf:
Compact state - Pil1 dimer with lipid headgroups fitted in native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

PDB-8qbg:
Stretched state - Pil1 in native eisosome lattice bound to plasma membrane microdomain
Method: single particle / : Kefauver JM, Zou L, Desfosses A, Loewith RJ

EMDB-43529:
L5A7 Fab bound to Indonesia2005 Hemagglutinin
Method: single particle / : Olia AS, Gorman J, Kwong PD

EMDB-43545:
L5A7 Fab bound to 28H6E11 anti-idiotype Fab
Method: single particle / : Olia AS, Morano NC, Kwong PD

EMDB-41514:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-1 week 0
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41515:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-1 at week 4
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41516:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-1 at week 16
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41517:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-1 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41518:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-2 at week 0
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41519:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 2-1 at week 4
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41520:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-2 at week 16
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41521:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 1-2 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41522:
Polyclonal immune complex of fab binding the H2 HA from serum of subject 1-3 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41541:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 3-3 at week 0
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41543:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 3-3 at week 16
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41544:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 3-3 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41545:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-1 at week 0
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41546:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-1 at week 4
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41547:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-1 at week 16
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41548:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-1 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41549:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-2 at week 0
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41550:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-2 at week 4
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41551:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-2 at week 16
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-41552:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 4-2 at week 20
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more