[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,118 items for (author: ma & jp)

EMDB-64077:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-64078:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-50018:
Avian reovirus nonstructural protein sigmaNS
Method: single particle / : Tuma R, Aspinall L

EMDB-64151:
BCCP-BC Conformation of apo-hPCC
Method: single particle / : Ni FY, Yan HF, Wang QH, Ma JP

EMDB-64152:
BCCP-CT Conformation of apo-hPCC
Method: single particle / : Ni FY, Yan HF, Wang QH, Ma JP

EMDB-64155:
BCCP-BC Conformation of ADP-bound hPCC
Method: single particle / : Ni FY, Yan HF, Wang QH, Ma JP

EMDB-64156:
BCCP-CT Conformation of ADP-bound hPCC
Method: single particle / : Ni FY, Yan HF, Wang QH, Ma JP

EMDB-64158:
BCCP-BC Conformation of AMPPNP-bound hPCC
Method: single particle / : Ni FY, Yan HF, Wang QH, Ma JP

EMDB-64161:
BCCP-CT Conformation of AMPPNP-bound hPCC
Method: single particle / : Ni FY, Yan HF, Wang QH, Ma JP

EMDB-64173:
BCCP-BC Conformation of ATP-bound hPCC
Method: single particle / : Ni FY, Yan HF, Wang QH, Ma JP

EMDB-64174:
Complete a6b6 of ATP-bound hPCC
Method: single particle / : Ni FY, Yan HF, Wang QH, Ma JP

EMDB-64180:
BCCP-CT Conformation of ATP-bound hPCC
Method: single particle / : Ni FY, Yan HF, Wang QH, Ma JP

EMDB-60393:
Cryo-EM structure of AbCapV filemant bound with 3',3'-cGAMP with extra phospholipid density
Method: single particle / : Kong JP, Li ZX, Ke SY, Xiao YB

EMDB-61417:
Cryo-EM structure of AbCapV dimer, apo form
Method: single particle / : Kong JP, Li ZX, Ke SY, Wu WQ, Xiao YB

EMDB-61419:
Cryo-EM structure of AbCapV tetramer, intermediate form
Method: single particle / : Kong JP, Li ZX, Ke SY, Wu WQ, Xiao YB

EMDB-49708:
cryo-EM structure of broad betacoronavirus binding antibody 1871 in complex with OC43 S2 subunit
Method: single particle / : Muthuraman K, Jackman MJ, Julien JP

EMDB-62291:
Cryo-EM structure of AbCapV S58A filament bound with 3'3'-cGAMP with extra phospholipid density
Method: single particle / : Kong JP, Li ZX, Wu WQ, Xiao YB

EMDB-51890:
ATP-bound human mitochondrial Hsp60-Hsp10 football complex (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-51891:
ATP-bound human mitochondrial Hsp60-Hsp10 half football complex (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-51892:
ATP-bound human mitochondrial Hsp60 double-ring complex (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-51893:
Apo human mitochondrial Hsp60 (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-48227:
Structure of zebrafish OTOP1 in nanodisc in complex with inhibitor C2.2
Method: single particle / : Burendei B, Ward AB

EMDB-48234:
Structure of zebrafish OTOP1 in nanodisc in the presence of inhibitor C11
Method: single particle / : Burendei B, Ward AB

EMDB-48235:
Structure of zebrafish OTOP1 in nanodisc in complex with inhibitor C2.36
Method: single particle / : Burendei B, Ward AB

EMDB-54888:
The cryo-EM structure of human Tissue Nonspecific Alkaline Phosphatase (hTNAP) in complex with MLS-0038949
Method: single particle / : Imam I, Coureux PD, Ballut L

EMDB-47924:
Structure of the native human NCP purified from HEK293 cells
Method: single particle / : Reid XJ, Sobti M, Low JKK, Stewart AG, Mackay JP

EMDB-48922:
Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44
Method: single particle / : Hailemariam S, Heide F, Bekkering E, Ivanochko D, Yoo R, Julien JP

EMDB-48921:
Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains
Method: single particle / : Heide F, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-48924:
Endogenous Pfs230D9-14 in complex with Pfs48/45
Method: single particle / : Heide F, Ivanochko D, Bekkering E, Yoo R, Hailemariam S, Julien JP

EMDB-48941:
Endogenous Pfs230D7-8 in complex with 18F25
Method: single particle / : Jackman JJ, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-63770:
Cryo-EM structure of Gi-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63771:
Cryo-EM structure of complex of transducer-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63772:
Cryo-EM structure of antagonist-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63773:
Cryo-EM structure of agonist-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63774:
Cryo-EM structure of Apo-GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-49734:
Methanosarcina acetivorans 50S subunit obtained from acetate-grown cells
Method: single particle / : Ghosh A, Fordjour GNR, Armache JP, Ferry JG, Murakami KS, Bevilacqua PC

EMDB-49757:
Methanosarcina acetivorans 50S subunit obtained from methanol-grown cells
Method: single particle / : Ghosh A, Fordjour GNR, Armache JP, Ferry JG, Murakami KS, Bevilacqua PC

EMDB-49998:
Cryo-EM structure of Methanosarcina acetivorans 70S ribosome
Method: single particle / : Ghosh A, Fordjour GNR, Armache JP, Ferry JG, Murakami KS, Bevilacqua PC

EMDB-70864:
Methanosarcina acetivorans large (50S) subunit dimer
Method: single particle / : Ghosh A, Fordjour GNR, Armache JP, Ferry JG, Murakami KS, Bevilacqua PC

EMDB-70475:
HIV-1 Env BG505 SOSIP.664-His in complex with PGT122 and 3BNC117 Fabs
Method: single particle / : Andrade TG, Ozorowski G, Ward AB

EMDB-70476:
HIV-1 Env BG505 SOSIP.664-dPG-His in complex with PGT122 and 3BNC117 Fabs
Method: single particle / : Andrade TG, Ozorowski G, Ward AB

EMDB-49201:
Cryo-EM structure of 110_C4 Fab in complex with CIDRa1.7 PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

EMDB-65574:
In situ structure of mitochondrial ATP synthase in whole C. reinhardtii cells
Method: subtomogram averaging / : Luo ZW, Wang QH, Ma JP

EMDB-65576:
In situ structure of S. pombe 80S ribosome
Method: subtomogram averaging / : Luo ZW, Wang QH, Ma JP

EMDB-65645:
In situ structure of S. pombe Fatty Acid Synthase
Method: subtomogram averaging / : Luo ZW, Wang QH, Ma JP

EMDB-50546:
Cryo-EM structure of Influenza B/Washington/02/2019 virus hemagglutinin in complex with single-domain antibody hVHH-69.
Method: single particle / : Felix J, Matthys A, Savvides SN, Saelens X

EMDB-50547:
Cryo-EM structure of Influenza B/Washington/02/2019 virus neuraminidase in complex with single-domain antibody hVHH-525.
Method: single particle / : Felix J, Matthys A, Savvides SN, Saelens X

EMDB-49060:
2.37 A S.cerevisiae Chd1[L886G/L889G/L891G]-nucleosome reconstructruction. Combined 1:1 and 2:1 complexes
Method: single particle / : Nodelman IM, Folkwein HJ, Armache JP, Bowman GD

EMDB-49061:
2.54 A S.cerevisiae Chd1[L886G/L889G/L891G]-nucleosome 1:1 complex
Method: single particle / : Nodelman IM, Folkwein HJ, Armache JP, Bowman GD

EMDB-49062:
2.61 A S.cerevisiae Chd1[L886G/L889G/L891G]-nucleosome 2:1 complex
Method: single particle / : Nodelman IM, Folkwein HJ, Armache JP, Bowman GD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more