[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,158 items for (author: lo & jm)

EMDB-55929:
Structure of human CLN8 in an apo-state
Method: single particle / : Lacabanne D, Sheokand PK, Ruprecht JJ, Petkevicius K

EMDB-56021:
Structure of human CLN8 in the presence of docosahexaenoate
Method: single particle / : Lacabanne D, Sheokand PK, Ruprecht JJ, Petkevicius K

EMDB-56022:
Structure of human CLN8 in the presence of oleate
Method: single particle / : Lacabanne D, Sheokand PK, Ruprecht JJ, Petkevicius K

EMDB-73108:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73109:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-73110:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73866:
Raw consensus map of rEatAp complexed with Fab G12
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73867:
Constituent EM map: local refinement of putative MUC2 binding domain of rEatAp and Fv domain of Fab G12
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73868:
Constituent EM map: local refinement of putative MUC2 binding domain of rEatAp and Fab G12 from best Fab-containing 2D classes
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-54642:
Cryo-EM (200kV) structure of pyruvate decarboxylase from Neoasaia chiangmaiensis
Method: single particle / : van Rooyen JM, Barker I, Fruncillo S, Pandya A, Ozkaya D, Alcasabas A

EMDB-73869:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 25
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73870:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody G12
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73871:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 15
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73872:
Cryo-EM structure of Enterotoxigenic Escherichia coli autotransporter A (EatA) complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73873:
Cryo-EM structure of Secreted extracellular protein A (SepA) from Shigella flexneri complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-73874:
Cryo-EM structure of Protein involved in colonization (Pic) from Enteroaggregative Escherichia coli complexed with the fragment antigen binding domain of monoclonal antibody 40
Method: single particle / : Buckley DP, Berndsen ZT

EMDB-54440:
Cellular environment of FIB-sectioned yeast cell overexpressing Brr6(I149D)
Method: electron tomography / : Fischer JS, Wojtynek M, Kumar A, Baird HJM, Radilova K, Maslennikova D, Ramachandran K, Becker AN, Agote Aran A, Loffreda A, Kralt A, Jagannathan M, Dey G, Kutay U, Vanni S, Weis K

EMDB-53004:
Structure of eIF2B decamer bound to (P)eIF2 alpha and Compound A-(S)
Method: single particle / : Shilliday F, Maia de Oliveira T, Gancedo-Rodrigo M

EMDB-76230:
Structure of TMEM106B doublet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-76248:
Structure of TMEM106B singlet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-48755:
Cryo-EM structure of GLP-1R-Gs complex with peptide 15
Method: single particle / : Zhang X, Belousoff JM, Wootten D, Sexton MP

EMDB-73991:
Cryo-EM structure of human apo mTORC2
Method: single particle / : Wranik M, Lee JM, Rogala KB

EMDB-73992:
mTORC2 in complex with Akt1
Method: single particle / : Wranik M, Lee JM, Rogala KB

EMDB-72906:
Structure of GPR61 bound to inverse agonist compound 15
Method: single particle / : Lees JA, Dias JM, Han S

EMDB-64935:
Lectin FRIL from Lablab purpureus complexed to Lewis X tetrasaccharide
Method: single particle / : Nguyen VHT, Chen X, Liu YM, Ma C

EMDB-64936:
Lectin FRIL from Lablab purpureus with self glycan
Method: single particle / : Nguyen VHT, Liu YM, Chen X, Ma C

EMDB-64937:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

EMDB-64938:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

EMDB-71677:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-71678:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-48285:
Human PARP1 N-terminal domains bound to nicked DNA
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-49185:
Negative stain EM map of H1 HA (A/California/4/2009) in complex with monoclonal fab ST4
Method: single particle / : Rodriguez AJ, Han J, Ward AB

EMDB-49186:
Negative stain EM map of H1 HA (A/California/4/2009) in complex with monoclonal fab ST6 and monoclonal fab 045-09 2B05
Method: single particle / : Rodriguez AJ, Han J, Ward AB

EMDB-49187:
Negative stain EM map of H1 HA (A/California/4/2009) in complex with monoclonal fab ST10
Method: single particle / : Rodriguez AJ, Han J, Ward AB

EMDB-49188:
Negative stain EM map of H1 HA (A/California/4/2009) in complex with monoclonal fab ST13
Method: single particle / : Rodriguez AJ, Han J, Ward AB

EMDB-49189:
Negative stain EM map of H1 HA (A/California/4/2009) in complex with monoclonal fab ST14
Method: single particle / : Rodriguez AJ, Han J, Ward AB

EMDB-49190:
Negative stain EM map of H1 HA (A/California/4/2009) in complex with monoclonal fab ST15
Method: single particle / : Rodriguez AJ, Han J, Ward AB

EMDB-49191:
Negative stain EM map of H1 HA (A/California/4/2009) in complex with monoclonal fab ST17
Method: single particle / : Rodriguez AJ, Han J, Ward AB

EMDB-49192:
Negative stain EM map of H1 HA (A/California/4/2009) in complex with monoclonal fab ST18
Method: single particle / : Rodriguez AJ, Han J, Ward AB

EMDB-49097:
H1 hemagglutinin (A/Michigan/45/2015) in complex with anchor-targeting Fab ST15
Method: single particle / : Brouwer PJM, Loeffler JR, Ferguson JA, Rodriguez AJ, Han J, Ward AB

EMDB-49098:
H1 hemagglutinin (A/California/04/2009) with E47K mutation in HA2 in complex with central stem-targeting Fab ST10
Method: single particle / : Brouwer PJM, Loeffler JR, Ferguson JA, Rodriguez AJ, Han J, Ward AB

EMDB-49099:
H5 hemagglutinin (A/Jiangsu/NJ210/2023) in complex with central stem-targeting Fab ST14
Method: single particle / : Brouwer PJM, Loeffler JR, Ferguson JA, Rodriguez AJ, Han J, Ward AB

EMDB-49100:
H1 hemagglutinin (A/Michigan/45/2015) in complex with anchor-targeting Fab ST4
Method: single particle / : Brouwer PJM, Loeffler JR, Ferguson JA, Rodriguez AJ, Han J, Ward AB

EMDB-49203:
CryoEM structure of capsid from human astrovirus 1 in complex with human neonatal Fc receptor
Method: single particle / : Hall PD, Nelson CA, Fremont DH, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-49204:
CryoEM structure of human astrovirus 1 spike in complex with human neonatal Fc receptor
Method: single particle / : Hall PD, Nelson CA, Fremont DH, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-49897:
Alpha7-nicotinic acetylcholine receptor bound to conotoxin ImI
Method: single particle / : Stowell MHB, Hibbs RE, Noviello CM, Bhattacharjee B

EMDB-49898:
Alpha7-nicotinic acetylcholine receptor bound to conotoxin ImII
Method: single particle / : Stowell MHB, Hibbs RE, Noviello CM, Bhattacharjee B

EMDB-49899:
Muscle-type nicotinic acetylcholine receptor bound to conotoxin ImII
Method: single particle / : Stowell MHB, Hibbs RE, Noviello CM, Bhattacharjee B

EMDB-48313:
PARP1 ART in complex with HPF1 and EB47
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP
Method: single particle / : Lin RN, Torres JL, Tran AS, Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more