Database of articles cited by EMDB/PDB/SASBDB data

Keywords
Structure methods	All X-ray diffraction NMR electron microscopy small angle scattering neutron diffraction fiber diffraction powder diffraction infrared spectroscopy EPR fluorescence transfer theoretical model Hybrid
Author
Journal
IF	>30 >20 >10 >5 all

Title	Structures of Vibrio cholerae transcription complexes reveal how ToxR and TcpP recruit the RNA polymerase and activate virulence genes
Journal, issue, pages	Science Advances, Year 2025
Publish date	Aug 6, 2024 (structure data deposition date)
Authors	Alcaide-Jimenez A / Canals A / Baudin F / Machon C / Fabrega-Ferrer M / Bantysh O / Perez-Luque R / Murciano B / Mohammad AA / Rowse MJ ...Alcaide-Jimenez A / Canals A / Baudin F / Machon C / Fabrega-Ferrer M / Bantysh O / Perez-Luque R / Murciano B / Mohammad AA / Rowse MJ / Ferracciolo JM / Krukonis ES / Muller CW / Coll M
External links	Search PubMed
Methods	EM (single particle)
Resolution	2.6 - 7.2 Å
Structure data	51273 9gdo EMDB-51273, PDB-9gdo: Cryo-EM structure of Vibrio cholerae RNA polymerase holoenzyme bound to an ompU promoter DNA fragment Method: EM (single particle) / Resolution: 3.0 Å 51274 9gdp EMDB-51274, PDB-9gdp: Cryo-EM structure of Vibrio cholerae RNA polymerase holoenzyme bound to an ompU promoter DNA fragment and 5-mer RNA Method: EM (single particle) / Resolution: 2.6 Å 51275 9gdq EMDB-51275, PDB-9gdq: Cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR transcription factor and ompU promoter DNA Method: EM (single particle) / Resolution: 3.1 Å 51276 9gdr EMDB-51276, PDB-9gdr: Cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with TcpP transcription factor and a toxT promoter DNA fragment Method: EM (single particle) / Resolution: 2.7 Å 51277 9gds EMDB-51277, PDB-9gds: Cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR and TcpP transcription factors and a toxT promoter DNA fragment Method: EM (single particle) / Resolution: 2.9 Å EMDB-51278: Cryo-EM structure of Vibrio cholerae RNA polymerase dimer with ToxR and TcpP transcription factors and a toxT promoter DNA fragment Method: EM (single particle) / Resolution: 7.2 Å EMDB-51774: Consensus map of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR transcription factor and bound to an ompU promoter DNA fragment Method: EM (single particle) / Resolution: 3.1 Å EMDB-51775: Focused map #1 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR transcription factor and bound to an ompU promoter DNA fragment Method: EM (single particle) / Resolution: 3.1 Å EMDB-51776: Focused map #2 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR transcription factor and bound to an ompU promoter DNA fragment Method: EM (single particle) / Resolution: 3.8 Å EMDB-51948: Consensus map of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with TcpP transcription factor and bound to a toxT promoter DNA fragment Method: EM (single particle) / Resolution: 2.7 Å EMDB-51949: Focused map #1 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with TcpP transcription factor and bound to a toxT promoter DNA fragment Method: EM (single particle) / Resolution: 2.7 Å EMDB-51950: Focused map #2 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with TcpP transcription factor and bound to a toxT promoter DNA fragment Method: EM (single particle) / Resolution: 2.7 Å EMDB-51955: Consensus map of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR and TcpP transcription factors and bound to a toxT promoter DNA fragment Method: EM (single particle) / Resolution: 2.9 Å EMDB-51956: Focused map #1 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR and TcpP transcription factors and bound to a toxT promoter DNA fragment Method: EM (single particle) / Resolution: 2.9 Å EMDB-51958: Focused map #2 of the cryo-EM structure of Vibrio cholerae RNA polymerase Transcription Activation Complex with ToxR and TcpP transcription factors and bound to a toxT promoter DNA fragment Method: EM (single particle) / Resolution: 2.9 Å
Chemicals	ChemComp-MG: Unknown entry ChemComp-ZN: Unknown entry
Source	vibrio cholerae o395 (bacteria) vibrio cholerae o1 biovar el tor str. n16961 (bacteria)
Keywords	TRANSCRIPTION / RNA polymerase / Open promoter complex / ompU / Vibrio cholerae / Transcription Activation Complex / toxT / TcpP / ToxR