[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 274 items for (author: liu & cc)

EMDB-36466:
FCP trimer in diatom Thalassiosira pseudonana

EMDB-41816:
Cryo-EM structure of the RAF1-HSP90-CDC37 complex in the closed state

EMDB-41817:
Cryo-EM structure of the HSP90 dimer (NTD-MD) in the semi-open state

EMDB-41818:
Cryo-EM structure of the cross-linked HSP90 dimer (NTD-MD) in the semi-open state

PDB-8u1l:
Cryo-EM structure of the RAF1-HSP90-CDC37 complex in the closed state

PDB-8u1m:
Cryo-EM structure of the HSP90 dimer (NTD-MD) in the semi-open state

PDB-8u1n:
Cryo-EM structure of the cross-linked HSP90 dimer (NTD-MD) in the semi-open state

EMDB-16933:
Structure of cGAS in complex with SPSB3-ELOBC

EMDB-16936:
cGAS-Nucleosome in complex with SPSB3-ELOBC (composite structure)

EMDB-16937:
Consensus refinement of cGAS/spsb3/EloBC/Nucleosome

EMDB-16938:
human cGAS/spsb3/EloBC in complex with nucleosome (2:2)

PDB-8okx:
Structure of cGAS in complex with SPSB3-ELOBC

PDB-8ol1:
cGAS-Nucleosome in complex with SPSB3-ELOBC (composite structure)

EMDB-26583:
Cryo-EM structure of Antibody 12-16 in complex with prefusion SARS-CoV-2 Spike glycoprotein

EMDB-41140:
APC/C-CDH1-UBE2C-Ubiquitin-CyclinB-NTD

EMDB-41142:
APC/C-CDH1-UBE2C-UBE2S-Ubiquitin-CyclinB

PDB-8tar:
APC/C-CDH1-UBE2C-Ubiquitin-CyclinB-NTD

PDB-8tau:
APC/C-CDH1-UBE2C-UBE2S-Ubiquitin-CyclinB

EMDB-34228:
SARS-COV-2 BA.1 Spike incomplex with VacBB-665

EMDB-40047:
Structure of human ENPP1 in complex with variable heavy domain VH27.2

EMDB-33883:
Structural basis of human PRPS2 filaments

EMDB-17154:
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL+5.8 (consensus and constituent map 1)

EMDB-17155:
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL-6.2 (DNA conformation 1)

EMDB-17156:
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL-6.2 (DNA conformation 2)

EMDB-17157:
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL+5.8 (composite map)

EMDB-17158:
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL+5.8 (constituent map 2 from additional focus classification on PAS domains)

EMDB-17159:
Cryo-EM map of MYC-MAX-OCT4-LIN28 complex

EMDB-17160:
Cryo-EM structure of CLOCK-BMAL1 bound to the native Por enhancer nucleosome (map 2, additional 3D classification and flexible refinement)

EMDB-17161:
Cryo-EM structure of CLOCK-BMAL1 bound to the native Por enhancer nucleosome (map 1)

EMDB-17162:
MAX-MAX bound to a nucleosome at SHL+5.1 and SHL-6.9.

EMDB-17183:
OCT4 and MYC-MAX co-bound to a nucleosome

EMDB-17184:
MYC-MAX bound to a nucleosome at SHL+5.8

PDB-8osj:
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL-6.2 (DNA conformation 1)

PDB-8osk:
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL+5.8 (composite map)

PDB-8osl:
Cryo-EM structure of CLOCK-BMAL1 bound to the native Por enhancer nucleosome (map 2, additional 3D classification and flexible refinement)

PDB-8ots:
OCT4 and MYC-MAX co-bound to a nucleosome

PDB-8ott:
MYC-MAX bound to a nucleosome at SHL+5.8

EMDB-34226:
SARS-CoV-2 BA.2 spike RBD in complex bound with VacBB-551

EMDB-34227:
Cryo-EM structure of Singapore Grouper Iridovirus capsid block 1

EMDB-34229:
Cryo-EM structure of Singapore Grouper Iridovirus capsid block 4

EMDB-34230:
Cryo-EM structure of Singapore Grouper Iridovirus capsid block 2

EMDB-34235:
Cryo-EM structure of Singapore Grouper Iridovirus capsid block 3

EMDB-34236:
Cryo-EM structure of Singapore Grouper Iridovirus capsid block 5

EMDB-34251:
Singapore Grouper Iridovirus

EMDB-34815:
One asymmetric unit of Singapore grouper iridovirus capsid

EMDB-14922:
cryo-EM structure of omicron spike in complex with de novo designed binder, full map

PDB-7zrv:
cryo-EM structure of omicron spike in complex with de novo designed binder, full map

EMDB-14930:
cryo-EM structure of omicron spike in complex with de novo designed binder, local

EMDB-14947:
cryo-EM structure of D614 spike in complex with de novo designed binder, full and local maps(addition)

PDB-7zsd:
cryo-EM structure of omicron spike in complex with de novo designed binder, local

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more