[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 547 items for (author: liu & bb)

EMDB-65360:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65361:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65362:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vue:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vuf:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vug:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-73749:
Cryo-EM structure of KP.3 spike in complex with Nb9B
Method: single particle / : Ye G, Bu F, Liu B, Li F

EMDB-73750:
Structure of KP.3 spike in complex with Nanosota-9B (local refinement)
Method: single particle / : Ye G, Bu F, Liu B, Li F

PDB-9z1m:
Cryo-EM structure of KP.3 spike in complex with Nb9B
Method: single particle / : Ye G, Bu F, Liu B, Li F

PDB-9z1n:
Structure of KP.3 spike in complex with Nanosota-9B (local refinement)
Method: single particle / : Ye G, Bu F, Liu B, Li F

EMDB-72976:
Human EEPD1 EEP domain dimer
Method: single particle / : Liu M, Shen R, Tainer J

PDB-9yi2:
Human EEPD1 EEP domain dimer
Method: single particle / : Liu M, Shen R, Tainer J

EMDB-53353:
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Method: single particle / : Jadhav SS, Nigro M, Marcia M

PDB-9qtj:
Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Method: single particle / : Jadhav SS, Nigro M, Marcia M

EMDB-45279:
Diheteromeric GluN1/GluN2A (delM653) in nanodisc complexed with glycine, glutamate, and GNE-4123, open conformation
Method: single particle / : Jalali-Yazdi F, Kim J, Gouaux E

EMDB-45283:
Diheteromeric GluN1/GluN2A (delM653) in digitonin complexed with glycine, glutamate, and GNE-4123
Method: single particle / : Jalali-Yazdi F, Kim J, Gouaux E

EMDB-45284:
Diheteromeric GluN1/GluN2A (delM653) in digitonin complexed with glycine and glutamate
Method: single particle / : Jalali-Yazdi F, Kim J, Gouaux E

EMDB-45285:
Diheteromeric GluN1/GluN2A (M817V) in digitonin complexed with glycine, glutamate, and GNE-4123
Method: single particle / : Jalali-Yazdi F, Kim J, Gouaux E

PDB-9c7c:
Diheteromeric GluN1/GluN2A (delM653) in nanodisc complexed with glycine, glutamate, and GNE-4123, open conformation
Method: single particle / : Jalali-Yazdi F, Kim J, Gouaux E

PDB-9c7e:
Diheteromeric GluN1/GluN2A (delM653) in nanodisc complex with glycine, glutamate, and GNE-4123, open conformation, C2 symmetry
Method: single particle / : Jalali-Yazdi F, Kim J, Gouaux E

PDB-9c7p:
Diheteromeric GluN1/GluN2A (delM653) in digitonin complexed with glycine, glutamate, and GNE-4123
Method: single particle / : Jalali-Yazdi F, Kim J, Gouaux E

PDB-9c7q:
Diheteromeric NMDA receptor GluN1/GluN2A, in complex with glycine and glutamate
Method: single particle / : Jalali-Yazdi F, Kim J, Gouaux E

PDB-9c7r:
Diheteromeric GluN1/GluN2A (M817V) in digitonin complexed with glycine, glutamate, and GNE-4123
Method: single particle / : Jalali-Yazdi F, Kim J, Gouaux E

EMDB-45301:
mouse Seipin/Adig complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-45302:
mouse Seipin complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

PDB-9c8d:
mouse Seipin/Adig complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

PDB-9c8e:
mouse Seipin complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-47879:
Human adenosine A3 receptor Gi1 complex bound to adenosine
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-47880:
Human adenosine A3 receptor Gi complex (mini-Gsi chimera) bound to Piclidenoson (CF101, IB-MECA)
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-47994:
Focused refinement map of the human A3 adenosine receptor bound to adenosine (receptor only)
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-47998:
Focused refinement map of the human A3 adenosine receptor bound to Piclidenoson (receptor only)
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-48063:
Consensus map for A3AR-LUF7602 complex.
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-48064:
Focused refinement map of the structure of a human adenosine A3 receptor complex bound to the covalent antagonist LUF7602 (receptor only)
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-48065:
Structure of a human adenosine A3 receptor complex bound to the covalent antagonist LUF7602
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

PDB-9ebh:
Human adenosine A3 receptor Gi1 complex bound to adenosine
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

PDB-9ebi:
Human adenosine A3 receptor Gi complex (mini-Gsi chimera) bound to Piclidenoson (CF101, IB-MECA)
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

PDB-9ehs:
Structure of a human adenosine A3 receptor complex bound to the covalent antagonist LUF7602
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

PDB-9i2q:
Wzc-K540M-3YE MgADP C1
Method: single particle / : Liu JW, Yang Y, Naismith JH

PDB-9i2r:
Wzc-K540M-3YE MgADP C8
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-46828:
Cannabinoid receptor 1-Gi complex with novel ligand
Method: single particle / : Tummino TA, Iliopoulos-Tsoutsouvas C, Braz JM, O'Brien ES, Krishna Kumar K, Makriyannis M, Basbaum AI, Shoichet BK

EMDB-47992:
Cannabinoid receptor 1-Gi complex with novel ligand
Method: single particle / : Tummino TA, Iliopoulos-Tsoutsouvas C, Braz JM, O'Brien ES, Krishna Kumar K, Makriyannis M, Basbaum AI, Shoichet BK

PDB-9dgi:
Cannabinoid receptor 1-Gi complex with novel ligand
Method: single particle / : Tummino TA, Iliopoulos-Tsoutsouvas C, Braz JM, O'Brien ES, Krishna Kumar K, Makriyannis M, Basbaum AI, Shoichet BK

PDB-9ego:
Cannabinoid receptor 1-Gi complex with novel ligand
Method: single particle / : Tummino TA, Iliopoulos-Tsoutsouvas C, Braz JM, O'Brien ES, Krishna Kumar K, Makriyannis M, Basbaum AI, Shoichet BK

EMDB-50042:
Wzc-K540M-2YE MgADP C1
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-50043:
Wzc-K540M-2YE MgADP C8
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-50044:
Wzc-K540M-3YE MgADP C1
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-50045:
Wzc-K540M-3YE MgADP C8
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-50046:
Wzc-K540M-3YE-N711Y MgADP C1
Method: single particle / : Liu JW, Yang Y, Naismith JH

EMDB-50047:
Wzc-K540M-3YE-N711Y MgADP C8
Method: single particle / : Liu JW, Yang Y, Naismith JH

PDB-9exo:
Wzc-K540M-2YE MgADP C1
Method: single particle / : Liu JW, Yang Y, Naismith JH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more