[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,373 items for (author: li & ty)

EMDB-56682:
In situ ribosome structure from environmental sample of Pseudo-nitzschia
Method: subtomogram averaging / : Leisch N, Pyle E

EMDB-70024:
Rhesus Macaque mAb CHM-27 complexed with SARS-CoV-2 spike protein
Method: single particle / : Lin RN, Ward AB

EMDB-70025:
Rhesus Macaque mAb CHM-16 complexed with SARS-CoV-2 spike protein
Method: single particle / : Lin RN, Ward AB

EMDB-70026:
Rhesus Macaque DHIK wk40 polyFab + SARS-CoV-2 Spike
Method: single particle / : Lin RN, Ward AB

EMDB-70027:
Rhesus Macaque DHJB wk12 polyFab + SARS-CoV-2 Spike
Method: single particle / : Lin RN, Ward AB

EMDB-70028:
Rhesus Macaque L603 wk53 polyFab + SARS-CoV-2 Spike
Method: single particle / : Lin RN, Ward AB

EMDB-70029:
Rhesus Macaque L603 wk40 polyFab + SARS-CoV-2 Spike
Method: single particle / : Lin RN, Ward AB

EMDB-70030:
Rhesus Macaque DHJB wk40 polyFab + SARS-CoV-2 Spike
Method: single particle / : Lin RN, Ward AB

EMDB-70031:
Rhesus Macaque L603 wk12 polyFab + SARS-CoV-2 Spike
Method: single particle / : Lin RN, Ward AB

EMDB-70032:
Rhesus Macaque K620 wk12 polyFab + SARS-CoV-2 Spike
Method: single particle / : Lin RN, Ward AB

EMDB-70033:
Rhesus Macaque K620 wk53 polyFab + SARS-CoV-2 Spike
Method: single particle / : Lin RN, Ward AB

EMDB-70034:
Rhesus Macaque K620 wk40 polyFab + SARS-CoV-2 Spike
Method: single particle / : Lin RN, Ward AB

EMDB-64823:
PSI-LHCE supercomplex from Euglena gracilis
Method: single particle / : Bai TY, Mao ZY, Tian LR

EMDB-64824:
PSI-LHCE supercomplex from Euglena gracilis.
Method: single particle / : Bai TY, Mao ZY, Tian LR

EMDB-75641:
Full-length BG505 HIV-1 Env expressed in VLP
Method: subtomogram averaging / : Duquette M, Villa E

EMDB-75144:
30S ribosomal subunit from E. coli missing the gene encoding for the 16S rRNA 2'-O-methyltransferase RsmI
Method: single particle / : Barmada MI, Nandi S, Conn GL

PDB-10fz:
30S ribosomal subunit from E. coli missing the gene encoding for the 16S rRNA 2'-O-methyltransferase RsmI
Method: single particle / : Barmada MI, Nandi S, Conn GL

EMDB-70517:
Anthoceros agrestis Rubisco (8 RbcL and 8 RbcS1) head to head stacking.
Method: single particle / : Ang WSL, Oh ZG, Li FW, Gunn LH

EMDB-70520:
A. agrestis Rubisco (8 RbcL 7 RbcS 1 RbcS-STAR)
Method: single particle / : Ang WSL, Oh ZG, Li FW, Gunn LH

EMDB-53876:
Influenza A/H7N9 polymerase in complex with a 70-mer template in stalled elongation with backtracking and stem.
Method: single particle / : Arragain B, Cusack S

EMDB-53877:
Influenza A/H7N9 polymerase in complex with a 70-mer RNA template, in stalled elongation.
Method: single particle / : Arragain B, Cusack S

PDB-9raf:
Influenza A/H7N9 polymerase in complex with a 70-mer template in stalled elongation with backtracking and stem.
Method: single particle / : Arragain B, Cusack S

PDB-9rag:
Influenza A/H7N9 polymerase in complex with a 70-mer RNA template, in stalled elongation.
Method: single particle / : Arragain B, Cusack S

EMDB-63645:
The cryo-EM structure of in situ amplified (ISA) alpha-synuclein fibrils from DLB homogenate
Method: helical / : Cao TY, Zhao QY, Liu C, Li D

EMDB-63644:
The cryo-EM structure of in situ amplified (ISA) alpha-synuclein fibrils from PD homogenate
Method: helical / : Cao TY, Zhao QY, Liu C, Li D

EMDB-75514:
Structure of amplified aSyn filament by using seed amplification assay (SAA) from MSA patient CSF.
Method: helical / : Banerjee V, Wang F, Baker ML, Serysheva II, Soto C

PDB-10xu:
Structure of amplified aSyn filament by using seed amplification assay (SAA) from MSA patient CSF.
Method: helical / : Banerjee V, Wang F, Baker ML, Serysheva II, Soto C

EMDB-70395:
Ab1999 in complex with HIV-1 Env RC1
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

PDB-9oed:
Ab1999 in complex with HIV-1 Env RC1
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

EMDB-70231:
Ab1983 in complex with HIV-1 Env variant WIN332
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

PDB-9o8m:
Ab1983 in complex with HIV-1 Env variant WIN332
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

EMDB-70791:
Cryo-EM structure of the DDB1/CRBN-MRT-5702-G3BP2 ternary complex
Method: single particle / : Quan C, Petzold G, Gainza P, Tsai J, Bunker RD, Wiedmer L, Donckele EJ

PDB-9os2:
Cryo-EM structure of the DDB1/CRBN-MRT-5702-G3BP2 ternary complex
Method: single particle / : Quan C, Petzold G, Gainza P, Tsai J, Bunker RD, Wiedmer L, Donckele EJ

EMDB-54033:
LolCDE complex with Lpp lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54034:
LolCDE complex with Lpp lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54035:
LolCDE complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54036:
LolCDE complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54037:
LolCDE complex with LolB lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54038:
LolCDE complex with del 9-15 LolB lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54039:
LolCDEdelta(235-252) complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54040:
LolCDE with bound ATPgammaS
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54041:
LolCDE(delta 235-252) complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54478:
LolCDE LolE R239C Y250C mutant closed conformation
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

EMDB-54479:
LolCDE LolE R239C Y250 mutant open conformation
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rlc:
LolCDE complex with Lpp lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rld:
LolCDE complex with Lpp lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rle:
LolCDE complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rlf:
LolCDE complex with Pal lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rlg:
LolCDE complex with LolB lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

PDB-9rlh:
LolCDE complex with del 9-15 LolB lipoprotein
Method: single particle / : Symmons MF, Szewczyk P, Greene NP, Hardwick SW, Koronakis V

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more