[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 345 items for (author: kuang & y)

EMDB-63426:
TMEM164-substrate
Method: single particle / : Zhang MF

PDB-9lw1:
TMEM164-substrate
Method: single particle / : Zhang MF

EMDB-66373:
The PSI-ACPI supercomplex from the cryptophyte Chroomonas placoidea
Method: single particle / : Li XY, Mao ZY, Han GY

PDB-9wyp:
The PSI-ACPI supercomplex from the cryptophyte Chroomonas placoidea
Method: single particle / : Li XY, Mao ZY, Han GY

EMDB-63395:
Cryo-EM structure of the Nipah G head domain in complex with three Fabs
Method: single particle / : Wang Y, Deng Z, Zhao H

PDB-9lue:
Cryo-EM structure of the Nipah G head domain in complex with three Fabs
Method: single particle / : Wang Y, Deng Z, Zhao H

EMDB-71091:
Cas1-Cas2/3 integrase, heterohexameric assembly
Method: single particle / : Henriques WS, Bowman J, Hall LN, Gauvin CG, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B

EMDB-71097:
Cas1-Cas2/3 integrase bound to foreign dsDNA fragment
Method: single particle / : Henriques WS, Bowman J, Hall LN, Gauvin CG, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B

EMDB-71101:
Cas1-2/3 integration complex, 34 bp foreign DNA with PAM, first transesterification
Method: single particle / : Henriques WS, Bowman J, Hall LN, Gauvin CG, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B

EMDB-71112:
Cas1-2/3 integration complex, 34 bp foreign DNA with PAM, CRISPR leader association
Method: single particle / : Henriques WS, Bowman J, Hall LN, Gauvin CG, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B

EMDB-71114:
Cas1-2/3 integration complex, 32 bp foreign DNA without PAM, CRISPR leader association
Method: single particle / : Henriques WS, Bowman J, Hall LN, Gauvin CG, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B

EMDB-71115:
Cas1-2/3 integration complex, 32 bp foreign DNA without PAM, first transesterification
Method: single particle / : Henriques WS, Bowman J, Hall LN, Gauvin CG, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B

EMDB-71116:
Cas1-2/3 integration complex, 32 bp foreign DNA without PAM, full repeat
Method: single particle / : Henriques WS, Bowman J, Hall LN, Gauvin CG, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B

PDB-9p11:
Cas1-Cas2/3 integrase, heterohexameric assembly
Method: single particle / : Henriques WS, Bowman J, Hall LN, Gauvin CG, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B

PDB-9p1d:
Cas1-Cas2/3 integrase bound to foreign dsDNA fragment
Method: single particle / : Henriques WS, Bowman J, Hall LN, Gauvin CG, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B

EMDB-64766:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

EMDB-64768:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

EMDB-64769:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

EMDB-64770:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

PDB-9v44:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

PDB-9v46:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

PDB-9v47:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

PDB-9v48:
Coupling of polymerase-nucleoprotein-RNA in an influenza virus mini ribonucleoprotein complex
Method: single particle / : Kang H, Yang Y, Liu Y, Li M, Zhang L, Lin Y, Rao Z, Lou Z

EMDB-47902:
Active state of wild-type EsCas13d ternary complex
Method: single particle / : Chou CW, Finkelstein IJ

PDB-9ec8:
Active state of wild-type EsCas13d ternary complex
Method: single particle / : Chou CW, Finkelstein IJ

EMDB-43237:
Structure of the BMAL1/HIF2A heterodimer in Complex with DNA
Method: single particle / : Li T, Tsai KL

PDB-8vhg:
Structure of the BMAL1/HIF2A heterodimer in Complex with DNA
Method: single particle / : Li T, Tsai KL

EMDB-60032:
PSI-FCPI-L in Thalassiosira pseudonana
Method: single particle / : Feng Y, Li Z, Wang W, Shen JR

EMDB-60044:
Tp-PSI-FCPI-S in Thalassiosira pseudonana
Method: single particle / : Feng Y, Li Z, Shen JR, Wang W

PDB-8zeh:
PSI-FCPI-L in Thalassiosira pseudonana
Method: single particle / : Feng Y, Li Z, Wang W, Shen JR

PDB-8zet:
Tp-PSI-FCPI-S in Thalassiosira pseudonana
Method: single particle / : Feng Y, Li Z, Shen JR, Wang W

EMDB-42614:
Structure of NaCT-PF4a complex
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

EMDB-42615:
Structure of NaDC3-aKG complex
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

EMDB-42616:
Structure of NaDC3-PF4a complex
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

EMDB-42617:
Structure of NaDC3-Succinate complex in Coo-Ci conformation
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

EMDB-42618:
Structure of NaDC3-DMS complex in Ci-Ci conformation
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

EMDB-42619:
Structure of NaDC3-DMS complex in Co-Ci conformation
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

EMDB-42620:
Structure of NaCT-succ complex
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

EMDB-42621:
Structure of NaDC3-Succinate complex in Coo-Coo conformation
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

PDB-8uvb:
Structure of NaCT-PF4a complex
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

PDB-8uvc:
Structure of NaDC3-aKG complex
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

PDB-8uvd:
Structure of NaDC3-PF4a complex
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

PDB-8uve:
Structure of NaDC3-Succinate complex in Coo-Ci conformation
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

PDB-8uvf:
Structure of NaDC3-DMS complex in Ci-Ci conformation
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

PDB-8uvg:
Structure of NaDC3-DMS complex in Co-Ci conformation
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

PDB-8uvh:
Structure of NaCT-succ complex
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

PDB-8uvi:
Structure of NaDC3-Succinate complex in Coo-Coo conformation
Method: single particle / : Li Y, Wang DN, Mindell JA, Rice WJ, Song J, Mikusevic V, Marden JJ, Becerril A, Kuang H, Wang B

EMDB-44143:
NorA in complex with Fab36 (NorA-BRIL fusion)
Method: single particle / : Xie P, Li Y, Kuang H, Wang DN, Traaseth NJ

EMDB-44144:
NorA in occluded conformation (NorA-BRIL fusion)
Method: single particle / : Xie P, Li Y, Kuang H, Wang DN, Traaseth NJ

EMDB-44145:
NorA in inward-open conformation (NorA-BRIL fusion)
Method: single particle / : Xie P, Li Y, Kuang H, Wang DN, Traaseth NJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more