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Showing all 31 items for (author: kobe & b)

EMDB-27070:
apo form Cryo-EM structure of Campylobacter jejune ketol-acid reductoisommerase crosslinked by Glutaraldehyde
Method: single particle / : Zheng S, Guddat LW

EMDB-26862:
CryoEM structure of the TIR domain from AbTir in complex with 3AD
Method: helical / : Li S, Nanson JD, Manik MK, Gu W, Landsberg MJ, Ve T, Kobe B

PDB-7uxu:
CryoEM structure of the TIR domain from AbTir in complex with 3AD
Method: helical / : Li S, Nanson JD, Manik MK, Gu W, Landsberg MJ, Ve T, Kobe B

EMDB-26191:
Cryo-EM structure of human SARM1 TIR domain in complex with 1AD
Method: single particle / : Saikot FK, Kobe B, Ve T, Nanson JD, Gu W, Luo Z, Brillault L, Landsberg MJ

EMDB-24272:
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (TIR:1AD)
Method: single particle / : Kerry PS, Nanson JD

EMDB-24273:
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (ARM and SAM domains)
Method: single particle / : Kerry PS, Nanson JD

EMDB-24274:
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (SAM-TIR:1AD)
Method: single particle / : Kerry PS, Adams S, Cunnea K, Brearley A, Bosanac T, Hughes RO, Ve T

PDB-7nak:
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (TIR:1AD)
Method: single particle / : Kerry PS, Nanson JD, Adams S, Cunnea K, Bosanac T, Kobe B, Hughes RO, Ve T

PDB-7nal:
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (ARM and SAM domains)
Method: single particle / : Kerry PS, Nanson JD, Adams S, Cunnea K, Bosanac T, Kobe B, Hughes RO, Ve T

EMDB-23405:
WT Chicken Scap L1-L7 / Fab 4G10 complex focused refinement
Method: single particle / : Kober DL, Radhakrishnan A, Goldstein JL, Brown MS, Clark LD, Bai XC, Rosenbaum DM

EMDB-23406:
Map of WT cScap/Fab complex
Method: single particle / : Kober DL, Radhakrishnan A, Goldstein JL, Brown MS, Clark LD, Bai XC, Rosenbaum DM

EMDB-23407:
Map of full mutant cScap/Fab complex
Method: single particle / : Kober DL, Radhakrishnan A, Goldstein JL, Brown MS, Clark LD, Bai XC, Rosenbaum DM

EMDB-23408:
Chicken Scap D435V L1-L7 domain / Fab complex focused map
Method: single particle / : Kober DL, Radhakrishnan A, Goldstein JL, Brown MS, Clark LD, Bai XC, Rosenbaum DM

PDB-7lkf:
WT Chicken Scap L1-L7 / Fab 4G10 complex focused refinement
Method: single particle / : Kober DL, Radhakrishnan A, Goldstein JL, Brown MS, Clark LD, Bai XC, Rosenbaum DM

PDB-7lkh:
Chicken Scap D435V L1-L7 domain / Fab complex focused map
Method: single particle / : Kober DL, Radhakrishnan A, Goldstein JL, Brown MS, Clark LD, Bai XC, Rosenbaum DM

PDB-7beq:
MicroED structure of the MyD88 TIR domain higher-order assembly
Method: electron crystallography / : Clabbers MTB, Holmes S, Muusse TW, Vajjhala P, Thygesen SJ, Malde AK, Hunter DJB, Croll TI, Nanson JD, Rahaman MH, Aquila A, Hunter MS, Liang M, Yoon CH, Zhao J, Zatsepin NA, Abbey B, Sierecki E, Gambin Y, Darmanin C, Kobe B, Xu H, Ve T

EMDB-23278:
Cryo-EM structure of ligand-free Human SARM1
Method: single particle / : Nanson JD, Gu W

PDB-7ld0:
Cryo-EM structure of ligand-free Human SARM1
Method: single particle / : Nanson JD, Gu W, Luo Z, Jia X, Landsberg MJ, Kobe B, Ve T

EMDB-8775:
RNA polymerase I Initial Transcribing Complex State 2
Method: single particle / : Han Y, He Y

PDB-5w65:
RNA polymerase I Initial Transcribing Complex State 2
Method: single particle / : Han Y, He Y

EMDB-8625:
Cryo-EM structure of the MAL TIR domain filament
Method: helical / : Ve T, Vajjhala PR, Hedger A, Croll T, DiMaio F, Horsefield S, Yu X, Lavrencic P, Hassan Z, Morgan GP, Mansell A, Mobli M, O'Carrol A, Chauvin B, Gambin Y, Sierecki E, Landsberg MJ, Stacey KJ, Egelman EH, Kobe B

PDB-5uzb:
Cryo-EM structure of the MAL TIR domain filament
Method: helical / : Ve T, Vajjhala PR, Hedger A, Croll T, DiMaio F, Horsefield S, Yu X, Lavrencic P, Hassan Z, Morgan GP, Mansell A, Mobli M, O'Carrol A, Chauvin B, Gambin Y, Sierecki E, Landsberg MJ, Stacey KJ, Egelman EH, Kobe B

EMDB-8771:
RNA polymerase I Initial Transcribing Complex
Method: single particle / : Han Y, He Y

EMDB-8774:
RNA Polymerase I Initial Transcribing Complex State 1
Method: single particle / : Han Y, He Y

EMDB-8776:
RNA polymerase I Initial Transcribing Complex State 3
Method: single particle / : Han Y, He Y

PDB-5w5y:
RNA polymerase I Initial Transcribing Complex
Method: single particle / : Han Y, He Y

PDB-5w64:
RNA Polymerase I Initial Transcribing Complex State 1
Method: single particle / : Han Y, He Y

PDB-5w66:
RNA polymerase I Initial Transcribing Complex State 3
Method: single particle / : Han Y, He Y

EMDB-8772:
Core Factor local refinement from Pol I Initial Transcribing Complex at 4.2 angstrom
Method: single particle / : Han Y, He Y

EMDB-8773:
Pol I local refinement from Pol I Initial Transcribing Complex at 3.7 angstrom
Method: single particle / : Han Y, He Y

EMDB-8777:
Pol I Initial Transcribing Complex with a truncated scaffold at 6.9 angstrom
Method: single particle / : Han Y, He Y

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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