[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 43 items for (author: johnson & mj)

EMDB-42981:
Prefusion-stabilized Respirovirus type 3 Fusion protein
Method: single particle / : Johnson NV, McLellan JS

EMDB-42983:
Structure of the Human Respirovirus 3 Fusion Protein Bound to Camelid Nanobodies 4C03 and 4C06
Method: single particle / : Johnson NV, Ramamohan AR, McLellan JS

EMDB-42987:
Structure of the Human Respirovirus 3 Fusion Protein Bound to Camelid Nanobodies 1D10 and 4C06
Method: single particle / : Johnson NJ, Ramamohan AR, McLellan JS

EMDB-29530:
SARS-CoV-2 XBB.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-29531:
SARS-CoV-2 BQ.1.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-40240:
SARS-CoV-2 BN.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-28758:
Calcitonin Receptor in complex with Gs and Pramlintide analogue peptide San45
Method: single particle / : Cao J, Sexton PM, Wootten DL, Belousoff MJ

EMDB-28759:
Human Amylin3 Receptor in complex with Gs and Pramlintide analogue peptide San385
Method: single particle / : Cao J, Sexton PM, Wootten DL

EMDB-28810:
Human Amylin3 Receptor in complex with Gs and Pramlintide analogue peptide San385 (Cluster 5 conformation)
Method: single particle / : Cao J, Sexton PM, Wootten DL, Radostin D

EMDB-28812:
Amylin 3 Receptor in complex with Gs and Pramlintide analogue peptide San45
Method: single particle / : Cao J, Sexton PM, Wootten DL, Belousoff MJ

EMDB-28596:
CryoEM Structure of NLRP3 NACHT domain in complex with G2394
Method: single particle / : Murray JM, Johnson MC

EMDB-27203:
IMM20190 Fab complex with SARS-CoV-2 Spike Trimer
Method: single particle / : Nikitin PA, DiMuzio JD, Dowling JP, Patel NB, Bingaman-Steele JL, Heimbach BC, Henriquez N, Nicolescu C, Polley A, Sikorski EL, Howanski RJ, Nath M, Shukla H, Scheaffer SM, Finn JP, Liang LF, Smith T, Storm N, McKay LGA, Johnson RI, Malsick LE, Honko AN, Griffiths A, Diamond MS, Sarma P, Geising DH, Morin MJ, Robinson MK

EMDB-26124:
50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)
Method: single particle / : Belousoff MJ, Piper S, Johnson R

EMDB-26125:
50S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistance
Method: single particle / : Belousoff MJ, Piper S, Johnson R

EMDB-27192:
IMM20253 Fab complex with Trimer Spike protein of SARS-CoV-2 virus
Method: single particle / : Nikitin PA, DiMuzio JD, Dowling JP, Patel NB, Bingaman-Steele JL, Heimbach BC, Henriquez N, Nicolescu C, Polley A, Sikorski EL, Howanski RJ, Nath M, Shukla H, Scheaffer SM, Finn JP, Liang LF, Smith T, Storm N, McKay LGA, Johnson RI, Malsick LE, Honko AN, Griffiths A, Diamond MS, Sarma P, Geising DH, Morin MJ, Robinson MK

EMDB-27193:
IMM20253 Fab complex with Spike monomer
Method: single particle / : Nikitin PA, DiMuzio JD, Dowling JP, Patel NB, Bingaman-Steele JL, Heimbach BC, Henriquez N, Nicolescu C, Polley A, Sikorski EL, Howanski RJ, Nath M, Shukla H, Scheaffer SM, Finn JP, Liang LF, Smith T, Storm N, McKay LGA, Johnson RI, Malsick LE, Honko AN, Griffiths A, Diamond MS, Sarma P, Geising DH, Morin MJ, Robinson MK

EMDB-27204:
IMM20184 Fab complex with SARS-CoV-2 Spike Trimer
Method: single particle / : Nikitin PA, DiMuzio JD, Dowling JP, Patel NB, Bingaman-Steele JL, Heimbach BC, Henriquez N, Nicolescu C, Polley A, Sikorski EL, Howanski RJ, Nath M, Shukla H, Scheaffer SM, Finn JP, Liang LF, Smith T, Storm N, McKay LGA, Johnson RI, Malsick LE, Honko AN, Griffiths A, Diamond MS, Sarma P, Geising DH, Morin MJ, Robinson MK

EMDB-27081:
IMM20184 and IMM20253 Fabs in ternary complex with SARS-CoV-2 receptor binding domain
Method: single particle / : Robinson MK, Nikitin PN

EMDB-26507:
SARS-CoV-2 spike in complex with Multivalent miniprotein inhibitor FUS231-P24 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26508:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS231-P24 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26509:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26510:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26511:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26512:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26180:
Calcitonin Receptor in complex with Gs and rat amylin peptide, CT-like state
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26188:
Calcitonin Receptor in complex with Gs and salmon calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26197:
Human Amylin2 Receptor in complex with Gs and rat amylin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26178:
Human Amylin1 Receptor in complex with Gs and rat amylin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26179:
Human Amylin2 Receptor in complex with Gs and human calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26184:
Calcitonin Receptor in complex with Gs and rat amylin peptide, bypass motif
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26190:
Calcitonin receptor in complex with Gs and human calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26196:
Human Amylin1 Receptor in complex with Gs and salmon calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26199:
Human Amylin2 Receptor in complex with Gs and salmon calcitonin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-26208:
Human Amylin3 Receptor in complex with Gs and rat amylin peptide
Method: single particle / : Cao J, Belousoff MJ, Johnson RM, Wootten DL, Sexton PM

EMDB-23156:
SARS-CoV 2 Spike Protein bound to LY-CoV555
Method: single particle / : Goldsmith JA, McLellan JS

EMDB-23274:
PF 06882961 bound to the glucagon-like peptide-1 receptor (GLP-1R):Gs complex
Method: single particle / : Belousoff MJ, Johnson RM, Drulyte I, Yu L, Kotecha A, Danev R, Wootten D, Zhang X, Sexton PM

EMDB-23275:
PF 06882961 bound to the glucagon-like peptide-1 receptor (GLP-1R):Gs complex
Method: single particle / : Belousoff MJ, Johnson RM, Drulyte I, Yu L, Kotecha A, Danev R, Wootten D, Zhang X, Sexton PM

EMDB-23276:
PF 06882961 bound to the glucagon-like peptide-1 receptor (GLP-1R)
Method: single particle / : Belousoff MJ, Johnson RM, Drulyte I, Yu L, Kotecha A, Danev R, Wootten D, Zhang X, Sexton PM

EMDB-22829:
Human Tom70 in complex with SARS CoV2 Orf9b
Method: single particle / : QCRG Structural Biology Consortium

EMDB-20613:
Cryo-EM structure of a de novo designed 16-helix transmembrane nanopore, TMHC8_R.
Method: single particle / : Johnson MJ, Reggiano G

EMDB-11002:
CryoEM structure of bovine cytochrome bc1 in complex with a tetrahydroquinolone inhibitor
Method: single particle / : Muench SP, Johnson R, Amporndanai K, Atonyuk S

EMDB-30126:
A de novo designed transmembrane nanopore, TMH4C4
Method: single particle / : Lu P, Xu C

EMDB-5584:
Life in the extremes: atomic structure of Sulfolobus Turreted Icosahedral Virus
Method: single particle / : Veesler D, Ng TS, Sendamarai AK, Eilers BJ, Lawrence CM, Lok SM, Young MJ, Johnson JE, Fu CY

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more