[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 83 items for (author: harris & cl)

EMDB-41617:
CryoEM structure of PI3Kalpha
Method: single particle / : Valverde R, Shi H, Holliday M, Sun M

PDB-8tu6:
CryoEM structure of PI3Kalpha
Method: single particle / : Valverde R, Shi H, Holliday M

EMDB-26520:
Post-fusion ectodomain of HSV-1 gB in complex with BMPC-23 Fab
Method: single particle / : Windsor IW, Kong SL, Garforth SJ, Almo SC, Harrison SC

EMDB-26521:
Post-fusion ectodomain of HSV-1 gB in complex with HSV010-13 Fab
Method: single particle / : Windsor IW, Kong SL, Garforth SJ, Almo SC, Harrison SC

PDB-7uhz:
Post-fusion ectodomain of HSV-1 gB in complex with BMPC-23 Fab
Method: single particle / : Windsor IW, Kong SL, Garforth SJ, Almo SC, Harrison SC

PDB-7ui0:
Post-fusion ectodomain of HSV-1 gB in complex with HSV010-13 Fab
Method: single particle / : Windsor IW, Kong SL, Garforth SJ, Almo SC, Harrison SC

EMDB-14531:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11 nanobody complex
Method: single particle / : Weckener M, Naismith JH, Vogirala VK

EMDB-14539:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H6 nanobody complex
Method: single particle / : Weckener M, Naismith JH, Vogirala VK

EMDB-14543:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-B5 nanobody complex
Method: single particle / : Weckener M, Naismith JH, Vogirala VK

EMDB-14544:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 1Up2Down conformation
Method: single particle / : Weckener M, Naismith JH, Vogirala VK

EMDB-14575:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-A10 nanobody complex
Method: single particle / : Weckener M, Naismith JH, Vogirala VK

EMDB-14576:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 2Up1Down conformation
Method: single particle / : Weckener M, Naismith JH, Vogirala VK

PDB-7z6v:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11 nanobody complex
Method: single particle / : Weckener M, Naismith JH, Vogirala VK

PDB-7z7x:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H6 nanobody complex
Method: single particle / : Weckener M, Naismith JH

PDB-7z85:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-B5 nanobody complex
Method: single particle / : Weckener M, Naismith JH

PDB-7z86:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 1Up2Down conformation
Method: single particle / : Weckener M, Naismith JH

PDB-7z9q:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-A10 nanobody complex
Method: single particle / : Weckener M, Naismith JH

PDB-7z9r:
CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 2Up1Down conformation
Method: single particle / : Weckener M, Naismith JH

EMDB-14332:
1.58 A STRUCTURE OF HUMAN APOFERRITIN OBTAINED FROM TITAN KRIOS 2 AT eBIC, DLS UNDER COMMISSIONING SESSION CM26464-2
Method: single particle / : Clare DK

PDB-7r5o:
1.58 A STRUCTURE OF HUMAN APOFERRITIN OBTAINED FROM TITAN KRIOS 2 AT eBIC, DLS UNDER COMMISSIONING SESSION CM26464-2
Method: single particle / : Clare DK

EMDB-14153:
SARS-CoV-2 Spike, C3 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

PDB-7qus:
SARS-CoV-2 Spike, C3 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-14152:
SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C3 symmetry
Method: single particle / : Naismith JH, Yang Y

EMDB-14154:
SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C1 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-14155:
SARS-CoV-2 Spike, C1 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

PDB-7qur:
SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C3 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-24715:
Focused Refined Map BORF2-APOBEC3Bctd Complex
Method: single particle / : Shaban NM, Yan R, Shi K, McLellan JS, Yu Z, Harris RS

EMDB-24716:
BORF2-APOBEC3Bctd Complex
Method: single particle / : Shaban NM, Yan R, Shi K, McLellan JS, Yu Z, Harris RS

EMDB-24709:
Composite Map BORF2-APOBEC3Bctd Complex
Method: single particle / : Shaban NM, Yan R

PDB-7rw6:
BORF2-APOBEC3Bctd Complex
Method: single particle / : Shaban NM, Yan R, Shi K, McLellan JS, Yu Z, Harris RS

EMDB-25794:
Cryo-EM structure of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1
Method: single particle / : Zhou T, Tsybovsky T

EMDB-25797:
Locally refined region of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1
Method: single particle / : Zhou T, Tsybovsky T

EMDB-25806:
Locally refined region of SARS-CoV-2 spike in complex with antibody A19-46.1
Method: single particle / : Zhou T, Kwong PD

EMDB-25807:
Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibody A19-46.1
Method: single particle / : Zhou T, Kwong PD

EMDB-25808:
Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibodies A19-46.1 and B1-182.1
Method: single particle / : Zhou T, Kwong PD

EMDB-26256:
Local refinement of cryo-EM structure of the interface of the Omicron RBD in complex with antibodies B-182.1 and A19-46.1
Method: single particle / : Zhou T, kwong PD

PDB-7tb8:
Cryo-EM structure of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1
Method: single particle / : Zhou T, Tsybovsky T, Kwong PD

PDB-7tbf:
Locally refined region of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1
Method: single particle / : Zhou T, Tsybovsky T, Kwong PD

PDB-7tc9:
Locally refined region of SARS-CoV-2 spike in complex with antibody A19-46.1
Method: single particle / : Zhou T, Kwong PD

PDB-7tca:
Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibody A19-46.1
Method: single particle / : Zhou T, Kwong PD

PDB-7tcc:
Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibodies A19-46.1 and B1-182.1
Method: single particle / : Zhou T, Kwong PD

PDB-7u0d:
Local refinement of cryo-EM structure of the interface of the Omicron RBD in complex with antibodies B-182.1 and A19-46.1
Method: single particle / : Zhou T, kwong PD

EMDB-22788:
Cryo-EM structure of the HCMV pentamer bound by Fabs 2-18 and 8I21
Method: single particle / : Wrapp D, McLellan JS

EMDB-23629:
Cryo-EM structure of the HCMV pentamer bound by human neuropilin 2
Method: single particle / : Wrapp D, McLellan JS

EMDB-23640:
Cryo-EM structure of the HCMV pentamer bound by antibodies 1-103, 1-32 and 2-25
Method: single particle / : Wrapp D, McLellan JS

PDB-7kbb:
Cryo-EM structure of the HCMV pentamer bound by Fabs 2-18 and 8I21
Method: single particle / : Wrapp D, McLellan JS

PDB-7m22:
Cryo-EM structure of the HCMV pentamer bound by human neuropilin 2
Method: single particle / : Wrapp D, McLellan JS

PDB-7m30:
Cryo-EM structure of the HCMV pentamer bound by antibodies 1-103, 1-32 and 2-25
Method: single particle / : Wrapp D, McLellan JS

EMDB-12777:
Nanobody C5 bound to Spike
Method: single particle / : Naismith JH, Weckener M

PDB-7oan:
Nanobody C5 bound to Spike
Method: single particle / : Naismith JH, Weckener M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more