[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 96 items for (author: haonan & z)

EMDB-65681:
Structure of the averaged natural silk fibroin nanofibril
Method: subtomogram averaging / : Haonan Z, Kai S, Yan L, Ping Z

EMDB-65682:
Averaged map of fibroin in silkworm silk
Method: subtomogram averaging / : Haonan Z, Kai S, Yan L, Ping Z

EMDB-65705:
Tomogram of fibroin and sericin in silkworm silk
Method: electron tomography / : Haonan Z, Kai S, Yan L, Ping Z

EMDB-65706:
Tomogram of fibroin in silkworm silk
Method: electron tomography / : Kai S, Haonan Z, Yan L, Ping Z

EMDB-65708:
Tomogram of natural silk fibroin extracted from posterior silk glands
Method: electron tomography / : Kai S, Haonan Z, Yan L, Ping Z

EMDB-62650:
A35 of MPXV in complex with mAb975
Method: single particle / : Yan RH, Yang HN

PDB-9kyz:
A35 of MPXV in complex with mAb975
Method: single particle / : Yan RH, Yang HN

EMDB-62178:
The average map of six beads composed of the nucleocapsid protein from SEV1
Method: subtomogram averaging / : Zhang H, Wang H, Zhu P

EMDB-62341:
The average map of eighteen beads composed of the NP from SEV1.
Method: subtomogram averaging / : Zhang H, Wang H, Zhu P

EMDB-62342:
The DNA coil forming by the nucleoprotein filaments in SEV1
Method: subtomogram averaging / : Zhang H, Wang H, Zhu P

EMDB-62348:
The lattice-like arrangement of nucleocapsid beads in SEV1
Method: subtomogram averaging / : Zhang H, Wang H, Zhu P

EMDB-62349:
The averaged map of pronounced stacking discs with a conspicuous channel
Method: subtomogram averaging / : Zhang H, Wang H, Zhu P

EMDB-38021:
The piccolo NuA4 bound to the H2A.Z nucleosome complex at pre-H4-acetylation state
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

EMDB-38022:
The class1 of piccolo NuA4 bound to the H2A.Z nucleosome complex at harboring state
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

EMDB-38023:
The class2 of piccolo NuA4 bound to the H2A.Z nucleosome complex at harboring state
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

EMDB-38024:
Structure of piccolo NuA4 and H2A.Z nucleosome 2:1 complex
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

EMDB-38025:
The piccolo NuA4 bound to the H2A.Z nucleosome complex with Ac-CoA at resetting state
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

EMDB-38026:
The piccolo NuA4 bound to the H2A.Z nucleosome-H4KQ Complex with Ac-CoA at resetting state
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

EMDB-60587:
The piccolo NuA4 bound to the H2A.Z nucleosome-H4KQ complex without Ac-CoA at pre-H2A.Z-acetylation state
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

PDB-8x2x:
The piccolo NuA4 bound to the H2A.Z nucleosome complex at pre-H4-acetylation state
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

PDB-8x2y:
The class1 of piccolo NuA4 bound to the H2A.Z nucleosome complex at harboring state
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

PDB-8x2z:
The class2 of piccolo NuA4 bound to the H2A.Z nucleosome complex at harboring state
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

PDB-8x30:
Structure of piccolo NuA4 and H2A.Z nucleosome 2:1 complex
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

PDB-8x31:
The piccolo NuA4 bound to the H2A.Z nucleosome complex with Ac-CoA at resetting state
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

PDB-8x32:
The piccolo NuA4 bound to the H2A.Z nucleosome-H4KQ Complex with Ac-CoA at resetting state
Method: single particle / : Wang L, Zhang H, Zhu H, Zhu P

EMDB-37983:
Overall structure of the LAT1-4F2hc bound with Leu
Method: single particle / : Yan RH, Li YN, Shi TH

PDB-8x0w:
Overall structure of the LAT1-4F2hc bound with Leu
Method: single particle / : Yan RH, Li YN, Shi TH

EMDB-37928:
The global map of Omicron Subvariants Spike with ACE2
Method: single particle / : Yan RH, Wang AJ, Yang HN

EMDB-37930:
The global map of Omicron Subvariants Spike with two antibodies
Method: single particle / : Yan RH, Wang AJ, Yang HN

PDB-8wyh:
The global map of Omicron Subvariants Spike with ACE2
Method: single particle / : Yan RH, Wang AJ, Yang HN

PDB-8wyj:
The global map of Omicron Subvariants Spike with two antibodies
Method: single particle / : Yan RH, Wang AJ, Yang HN

EMDB-37918:
Local map of Omicron Subvariants Spike with Antibody
Method: single particle / : Yan RH, Wang AJ

EMDB-37927:
Local map of Omicron Subvariants Spike with ACE2
Method: single particle / : Yan RH, Wang AJ

EMDB-39907:
Local map of Omicron Subvariant JN.1 RBD with ACE2
Method: single particle / : Yan RH, Yang HN

EMDB-60028:
Global map of Omicron Subvariants Spike with ACE2-PD
Method: single particle / : Yan RH, Yang HN

PDB-8zbq:
Local map of Omicron Subvariant JN.1 RBD with ACE2
Method: single particle / : Yan RH, Yang HN

EMDB-37637:
Structural basis for the nucleosome binding and chromatin compaction by the linker histone H5
Method: single particle / : Li WY, Song F, Zhu P

EMDB-37638:
Structural basis for the nucleosome binding and chromatin compaction by the linker histone H5
Method: single particle / : Li WY, Song F, Zhu P

EMDB-38407:
Structural basis for the linker histone H5-nucleosome binding and chromatin compaction
Method: single particle / : Li WY, Song F, Zhu P

PDB-8xjv:
Structural basis for the linker histone H5-nucleosome binding and chromatin compaction
Method: single particle / : Li WY, Song F, Zhu P

EMDB-36073:
Overall structure of the LAT1-4F2hc bound with L-dopa
Method: single particle / : Yan RH, Li YN, Shi TH

PDB-8j8l:
Overall structure of the LAT1-4F2hc bound with L-dopa
Method: single particle / : Yan RH, Li YN, Shi TH

EMDB-35361:
Overall structure of the LAT1-4F2hc bound with tyrosine
Method: single particle / : Yan RH, Li YN, Shi TH

EMDB-36074:
Overall structure of the LAT1-4F2hc bound with tryptophan
Method: single particle / : Yan RH, Li YN, Shi TH

PDB-8ida:
Overall structure of the LAT1-4F2hc bound with tyrosine
Method: single particle / : Yan RH, Li YN, Shi TH

PDB-8j8m:
Overall structure of the LAT1-4F2hc bound with tryptophan
Method: single particle / : Yan RH, Li YN, Shi TH

EMDB-36782:
SID1 transmembrane family member 2
Method: single particle / : Guo H, Qi C, Lu Y, Yang H, Zhu Y, Sun F, Ji X

EMDB-36783:
SID1 transmembrane family member 2
Method: single particle / : Guo H, Qi C, Lu Y, Yang H, Zhu Y, Sun F, Ji X

EMDB-36784:
SID1 transmembrane family member 2
Method: single particle / : Guo H, Qi C, Lu Y, Yang H, Zhu Y, Sun F, Ji X

EMDB-36785:
SID1 transmembrane family member 1
Method: single particle / : Guo H, Qi C, Lu Y, Yang H, Zhu Y, Sun F, Ji X

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more