[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 147 items for (author: hall & pr)

EMDB-56538:
Structure of the human two pore domain potassium ion channel TASK-3 L122V mutant (K2P9.1)
Method: single particle / : Hall PR, Rodstrom KEJ, Tucker SJ

PDB-28iz:
Structure of the human two pore domain potassium ion channel TASK-3 L122V mutant (K2P9.1)
Method: single particle / : Hall PR, Rodstrom KEJ, Tucker SJ

EMDB-53046:
Mouse otoferlin (216-1931) in complex with an MSP2N2 lipid nanodisc (30 mol% DOPS, 10 mol% PI(4,5)P2)
Method: single particle / : Cretu C, Moser T

PDB-9qe2:
Mouse otoferlin (216-1931) in complex with an MSP2N2 lipid nanodisc (30 mol% DOPS, 10 mol% PI(4,5)P2)
Method: single particle / : Cretu C, Moser T

EMDB-54802:
Mouse otoferlin (216-1931) in the lipid-free, Ca2+-bound state, "open" conformation (class 2)
Method: single particle / : Cretu C, Moser T

EMDB-54805:
Mouse otoferlin (216-1931) in complex with a lipid nanodisc (comprising 25% PS and 5% PIP2)
Method: single particle / : Cretu C, Moser T

EMDB-54809:
Mouse otoferlin (216-1931) in the lipid-free Ca2+-bound state, "open" conformation (class 1)
Method: single particle / : Cretu C, Moser T

EMDB-54827:
Mouse otoferlin (residues 216-1931) in the lipid-bound state (merged datasets)
Method: single particle / : Cretu C, Moser T

EMDB-54883:
Mouse otoferlin (216-1931) in the lipid-free, Ca2+-free state ("loose" conformation)
Method: single particle / : Cretu C, Moser T

EMDB-54923:
Mouse otoferlin (216-1931) in the lipid-free Ca2+-bound state, "closed-like" conformation
Method: single particle / : Cretu C, Moser T

PDB-9se5:
Mouse otoferlin (216-1931) in the lipid-free, Ca2+-bound state, "open" conformation (class 2)
Method: single particle / : Cretu C, Moser T

PDB-9sea:
Mouse otoferlin (216-1931) in complex with a lipid nanodisc (comprising 25% PS and 5% PIP2)
Method: single particle / : Cretu C, Moser T

PDB-9seg:
Mouse otoferlin (216-1931) in the lipid-free Ca2+-bound state, "open" conformation (class 1)
Method: single particle / : Cretu C, Moser T

PDB-9sfl:
Mouse otoferlin (residues 216-1931) in the lipid-bound state (merged datasets)
Method: single particle / : Cretu C, Moser T

PDB-9sh0:
Mouse otoferlin (216-1931) in the lipid-free, Ca2+-free state ("loose" conformation)
Method: single particle / : Cretu C, Moser T

PDB-9si1:
Mouse otoferlin (216-1931) in the lipid-free Ca2+-bound state, "closed-like" conformation
Method: single particle / : Cretu C, Moser T

EMDB-47031:
Insulin receptor bound with de novo designed agonist called "RF-405".
Method: single particle / : Bai XC

EMDB-47041:
Insulin receptor bound with de novo designed agonist called "S2-F1-S1"
Method: single particle / : Bai XC

EMDB-47043:
Insulin receptor in complex with both insulin and de novo designed site-2 binder "S2B".
Method: single particle / : Bai XC

PDB-9dn6:
Insulin receptor bound with de novo designed agonist called "RF-405".
Method: single particle / : Bai XC

PDB-9dni:
Insulin receptor bound with de novo designed agonist called "S2-F1-S1"
Method: single particle / : Bai XC

PDB-9dnn:
Insulin receptor in complex with both insulin and de novo designed site-2 binder "S2B".
Method: single particle / : Bai XC

EMDB-49758:
Structure of Synaptic Vesicle Protein 2A Bound to Brivaracetam and UCB1244283
Method: single particle / : Mittal A, Martin MF, Ledecq M, Horanyi PS, Coleman JA

EMDB-71500:
Structure of Synaptic Vesicle Protein 2A Bound to UCB7361
Method: single particle / : Mittal A, Martin MF, Ledecq M, Horanyi PS, Coleman JA

EMDB-71501:
Structure of Synaptic Vesicle Protein 2A Bound to UCB-J
Method: single particle / : Mittal A, Martin MF, Ledecq M, Horanyi PS, Coleman JA

EMDB-71502:
Structure of Synaptic Vesicle Protein 2A Bound to Levetiracetam and UCB1244283
Method: single particle / : Mittal A, Martin MF, Ledecq M, Horanyi PS, Coleman JA

PDB-9ntc:
Structure of Synaptic Vesicle Protein 2A Bound to Brivaracetam and UCB1244283
Method: single particle / : Mittal A, Martin MF, Ledecq M, Horanyi PS, Coleman JA

PDB-9pc9:
Structure of Synaptic Vesicle Protein 2A Bound to UCB7361
Method: single particle / : Mittal A, Martin MF, Ledecq M, Horanyi PS, Coleman JA

PDB-9pcb:
Structure of Synaptic Vesicle Protein 2A Bound to UCB-J
Method: single particle / : Mittal A, Martin MF, Ledecq M, Horanyi PS, Coleman JA

EMDB-47426:
CryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody 52
Method: single particle / : Jaiswal D, Bajic G

PDB-9e21:
CryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody 52
Method: single particle / : Jaiswal D, Bajic G

EMDB-70549:
Cryo-landed and laser rehydrated beta-galactosidase
Method: single particle / : Mertz KL, Jordahl D, Hemme CA, Probasco MD, Forbes DS, Ducos PL, Salome AZ, Quarmby ST, Grant T, Coon JJ

EMDB-70551:
Outside of laser spot cryo-landed beta galactosidase
Method: single particle / : Mertz KL, Jordahl D, Hemme CA, Probasco MD, Forbes DS, Ducos PL, Salome AZ, Quarmby ST, Grant T, Coon JJ

EMDB-70552:
Plunge frozen control Beta Galactosidase
Method: single particle / : Mertz KL, Jordahl D, Hemme CA, Probasco MD, Forbes DS, Ducos PL, Salome AZ, Quarmby ST, Grant T, Coon JJ

EMDB-51158:
Structure of the human two pore domain potassium ion channel TASK-3 (K2P9.1)
Method: single particle / : Hall PH, Rodstrom KEJ, Tucker SJ

EMDB-51159:
Structure of the human two pore domain potassium ion channel TASK-3 (K2P9.1) G236R mutant
Method: single particle / : Rodstrom KEJ, Hall PH, Tucker SJ

EMDB-51160:
Structure of the human two pore domain potassium ion channel TASK-1 (K2P3.1)
Method: single particle / : Rodstrom KEJ, Hall PH, Tucker SJ

PDB-9g9v:
Structure of the human two pore domain potassium ion channel TASK-3 (K2P9.1)
Method: single particle / : Hall PH, Rodstrom KEJ, Tucker SJ

PDB-9g9w:
Structure of the human two pore domain potassium ion channel TASK-3 (K2P9.1) G236R mutant
Method: single particle / : Rodstrom KEJ, Hall PH, Tucker SJ

PDB-9g9x:
Structure of the human two pore domain potassium ion channel TASK-1 (K2P3.1)
Method: single particle / : Rodstrom KEJ, Hall PH, Tucker SJ

EMDB-16375:
SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody
Method: single particle / : Das H, Hallberg BM

PDB-8c0y:
SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody
Method: single particle / : Das H, Hallberg BM

EMDB-42970:
Model and map from local refinement of a CAB-A17 - Omicron Ba.1 spike complex
Method: single particle / : Hallberg BM, Das H

PDB-8v4f:
Model and map from local refinement of a CAB-A17 - Omicron Ba.1 spike complex
Method: single particle / : Hallberg BM, Das H

EMDB-42430:
Structure of synaptic vesicle protein 2B with padsevonil
Method: single particle / : Martin MF, Mittal A, Levin E, Adams C, Yang M, Ledecq M, Horanyi PS, Coleman JA

EMDB-42431:
Structure of synaptic vesicle protein 2A in complex with a nanobody
Method: single particle / : Mittal A, Martin MF, Levin E, Adams C, Yang M, Ledecq M, Horanyi PS, Coleman JA

EMDB-42432:
Structure of the synaptic vesicle protein 2A Luminal domain in complex with a nanobody
Method: single particle / : Mittal A, Martin MF, Levin E, Adams C, Yang M, Ledecq M, Horanyi PS, Coleman JA

PDB-8uo8:
Structure of synaptic vesicle protein 2B with padsevonil
Method: single particle / : Martin MF, Mittal A, Levin E, Adams C, Yang M, Ledecq M, Horanyi PS, Coleman JA

PDB-8uo9:
Structure of synaptic vesicle protein 2A in complex with a nanobody
Method: single particle / : Mittal A, Martin MF, Levin E, Adams C, Yang M, Ledecq M, Horanyi PS, Coleman JA

PDB-8uoa:
Structure of the synaptic vesicle protein 2A Luminal domain in complex with a nanobody
Method: single particle / : Mittal A, Martin MF, Levin E, Adams C, Yang M, Ledecq M, Horanyi PS, Coleman JA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more