[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 10,604 items for (author: gu & x)

EMDB-71823:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

PDB-9ps5:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

EMDB-70900:
Cryo-EM structure of HCoV-OC43-Lab Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan (D1 domain local refine)
Method: single particle / : Jin M, Rini JM

EMDB-70901:
Cryo-EM structure of HCoV-OC43-Lab Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan
Method: single particle / : Jin M, Rini JM

EMDB-70902:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein (local refined D1 domain)
Method: single particle / : Jin M, Rini JM

EMDB-70903:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein
Method: single particle / : Jin M, Rini JM

EMDB-70904:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan (Local refined D1 domain)
Method: single particle / : Jin M, Rini JM

PDB-9ovk:
Cryo-EM structure of HCoV-OC43-Lab Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan (D1 domain local refine)
Method: single particle / : Jin M, Rini JM

PDB-9ovl:
Cryo-EM structure of HCoV-OC43-Lab Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan
Method: single particle / : Jin M, Rini JM

PDB-9ovm:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein (local refined D1 domain)
Method: single particle / : Jin M, Rini JM

PDB-9ovn:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein
Method: single particle / : Jin M, Rini JM

PDB-9ovo:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan (Local refined D1 domain)
Method: single particle / : Jin M, Rini JM

EMDB-64679:
Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm
Method: single particle / : Liu Q, Gui M, Wu JP, Zhou LN

PDB-9v10:
Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm
Method: single particle / : Liu Q, Gui M, Wu JP, Zhou LN

EMDB-64557:
A cryo_EM structure of Cagrilintide-CTR-Gs complex
Method: single particle / : zhao L, Gu Y

EMDB-64558:
A focused Cryo_EM structure of Cagrilintide-CTR-Gs complex
Method: single particle / : zhao L, Gu Y

EMDB-64560:
A combined cryo_EM structure of Cagrilintide-CTR-Gs complex
Method: single particle / : Zhao L, Gu Y, Yuan Q

EMDB-64561:
A focused Cryo_EM structure of Cagrilintide-AMY1R-Gs complex
Method: single particle / : zhao L, Gu Y

EMDB-64562:
A cryo_EM structure of Cagrilintide-AMY1R-Gs complex
Method: single particle / : zhao L, Gu Y

EMDB-64563:
A combined Cryo_EM structure of Cagrilintide-AMY1R-Gs complex
Method: single particle / : Yuan Q, Zhao L, Gu Y

PDB-9uwm:
A combined cryo_EM structure of Cagrilintide-CTR-Gs complex
Method: single particle / : Zhao L, Gu Y, Yuan Q

PDB-9uwq:
A combined Cryo_EM structure of Cagrilintide-AMY1R-Gs complex
Method: single particle / : Yuan Q, Zhao L, Gu Y

EMDB-53943:
Manikomycin bound to the Escherichia coli 50S ribosomal subunit
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

EMDB-54009:
Manikomycin bound to the Escherichia coli 70S ribosome
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

PDB-9rfw:
Manikomycin bound to the Escherichia coli 50S ribosomal subunit
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

PDB-9rja:
Manikomycin bound to the Escherichia coli 70S ribosome
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

EMDB-66262:
Cryo-EM structure of loop truncated self-sufficient P450 from Shimazuella soli
Method: single particle / : Xie ZZ, Li SY, Liu ZW, Li QR, Huang JW, Chen CC, Guo RT

PDB-9wuk:
Cryo-EM structure of loop truncated self-sufficient P450 from Shimazuella soli
Method: single particle / : Xie ZZ, Li SY, Liu ZW, Li QR, Huang JW, Chen CC, Guo RT

EMDB-69608:
Structure of the PADI6 dimer
Method: single particle / : Liu Q, Gui M

EMDB-69633:
Structure of the PADI6 tetramer assembled from two dimers
Method: single particle / : Liu Q, Gui M

EMDB-69635:
Structure of the PADI6 hexamer assembled from three dimers
Method: single particle / : Liu Q, Gui M

EMDB-69637:
Structure of the PADI6 octamer assembled from four dimers
Method: single particle / : Liu Q, Gui M

EMDB-69638:
Structure of the PADI6 decamer assembled from five dimers
Method: single particle / : Liu Q, Gui M

EMDB-69639:
Structure of the PADI6 filament
Method: single particle / : Liu Q, Gui M

EMDB-66257:
Cryo-EM structure of full-length self-sufficient P450 from Shimazuella soli
Method: single particle / : Xie ZZ, Li SY, Liu ZW, Li QR, Huang JW, Chen CC, Guo RT

PDB-9wuc:
Cryo-EM structure of full-length self-sufficient P450 from Shimazuella soli
Method: single particle / : Xie ZZ, Li SY, Liu ZW, Li QR, Huang JW, Chen CC, Guo RT

EMDB-66267:
Cryo-EM structure of full-length self-sufficient P450 in complex with NADPH from Shimazuella soli
Method: single particle / : Xie ZZ, Li SY, Liu ZW, Li QR, Huang JW, Chen CC, Guo RT

PDB-9wup:
Cryo-EM structure of full-length self-sufficient P450 in complex with NADPH from Shimazuella soli
Method: single particle / : Xie ZZ, Li SY, Liu ZW, Li QR, Huang JW, Chen CC, Guo RT

EMDB-66258:
Cryo-EM structure of one-heme-missing self-sufficient P450 from Shimazuella soli
Method: single particle / : Xie ZZ, Li SY, Liu ZW, Li QR, Huang JW, Chen CC, Guo RT

PDB-9wud:
Cryo-EM structure of one-heme-missing self-sufficient P450 from Shimazuella soli
Method: single particle / : Xie ZZ, Li SY, Liu ZW, Li QR, Huang JW, Chen CC, Guo RT

EMDB-76979:
Cryo-ET of mitochondrial membrane in direct interaction with alpha-synuclein exhibiting membrane morphological distortion
Method: electron tomography / : Jaber N, Dai W

EMDB-76980:
Supplemental: irregularly shaped mitochondria interacting with alpha-synuclein
Method: electron tomography / : Jaber N, Dai W

EMDB-76981:
Supplemental: alpha-synuclein oligomers on the surface of a mitochondrial membrane
Method: electron tomography / : Jaber N, Dai W

EMDB-76983:
Supplemental: mitochondria not associated with alpha-synuclein
Method: electron tomography / : Jaber N, Dai W

EMDB-56110:
Flat clathrin lattice on endosomes
Method: subtomogram averaging / : Gul M, Hakala M, Moparthi SB, Ganeva I, Bernat-Silvestre C, Marcuello C, Espadas J, Colom A, Kukulski W, Vassilopoulos S, Kaksonen M, Roux A, Kudryashev M

EMDB-56112:
Cryo-electron tomogram of endosomes in HeLa cells
Method: electron tomography / : Hakala M, Moparthi SB, Ganeva I, Gul M, Bernat-Silvestre C, Marcuello C, Espadas J, Colom A, Kudryashev M, Kukulski W, Vassilopoulos S, Kaksonen M, Roux A

EMDB-66516:
AR234958 bound Mas1 Receptor Complex
Method: single particle / : Zhang YM, Liu H, Xu HE

EMDB-66517:
AR234958 bound Mas1 Receptor
Method: single particle / : Zhang YM, Liu H, Xu HE

PDB-9x40:
AR234958 bound Mas1 Receptor Complex
Method: single particle / : Zhang YM, Liu H, Xu HE

PDB-9x41:
AR234958 bound Mas1 Receptor
Method: single particle / : Zhang YM, Liu H, Xu HE

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more