[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,052 items for (author: gregor & w)

EMDB-65509:
Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Zhang J, Wang C

PDB-9w0n:
Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Zhang J, Wang C

EMDB-71426:
Lipid droplet biogenesis by the seipin complex
Method: single particle / : Pedro CM, Siyoung K, Yohannes A, Gregory V, Tobias W, Robert F

PDB-9p9w:
Lipid droplet biogenesis by the seipin complex
Method: single particle / : Pedro CM, Siyoung K, Yohannes A, Gregory V, Tobias W, Robert F

EMDB-75004:
One Lmod2 and incoming actin at the pointed end of F-actin
Method: single particle / : Brotzman SB, Palmer NJ, Dominguez R

PDB-9zzk:
One Lmod2 and incoming actin at the pointed end of F-actin
Method: single particle / : Brotzman SB, Palmer NJ, Dominguez R

EMDB-55731:
Subtomogram average of septal junctions from Nostoc PCC7120 wild type
Method: subtomogram averaging / : Kieninger AK, Li Y, Janovic A, Tokarz P, Maldener I, Weiss GL

EMDB-55732:
Subtomogram average of septal junctions from Nostoc PCC7120 FraD-TM
Method: subtomogram averaging / : Kieninger AK, Li Y, Janovic A, Tokarz P, Maldener I, Weiss GL

EMDB-55733:
Cryo-electron tomogram of septal region from Nostoc PCC7120 wild type
Method: electron tomography / : Kieninger AK, Li Y, Janovic A, Tokarz P, Maldener I, Weiss GL

EMDB-55734:
Cryo-electron tomogram of septal region from Nostoc PCC7120 FraD-TM
Method: electron tomography / : Kieninger AK, Li Y, Janovic A, Tokarz P, Maldener I, Weiss GL

EMDB-55735:
Cryo-electron tomogram of septal region from Nostoc PCC7120 FraD-TM
Method: electron tomography / : Kieninger AK, Li Y, Janovic A, Tokarz P, Maldener I, Weiss GL

EMDB-72553:
Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site - Map 1a
Method: single particle / : Shandilya S, Molodtsov V, Wang C, Ebright RH

EMDB-72554:
Escherichia coli transcription-translation loosely coupled complex complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site - Map 1
Method: single particle / : Shandilya S, Molodtsov V, Wang C, Ebright RH

EMDB-72646:
Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
Method: single particle / : Shandilya S, Wang C, Molodtsov V, Ebright RH

PDB-9y79:
Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
Method: single particle / : Shandilya S, Wang C, Molodtsov V, Ebright RH

EMDB-73949:
Q23.MD39 in Complex with Fabs from antibodies CH01 and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-73950:
CryoEM map of CK52.1 in complex with Q23.V033GT
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

PDB-9z9l:
Q23.MD39 in Complex with Fabs from antibodies CH01 and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-76230:
Structure of TMEM106B doublet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-76248:
Structure of TMEM106B singlet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-54060:
Cryo-EM structure of the CorM filament in the presence of CorR from cyanobacterium Anabaena sp. PCC 7120
Method: single particle / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Schur FKM, Loose M

EMDB-54061:
Cryo-EM structure of the CorM filament from cyanobacterium Anabaena sp. PCC 7120
Method: single particle / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Schur FKM, Loose M

EMDB-54062:
Cryo-EM structure of the delta1-40 CorM filament from cyanobacterium Anabaena sp. PCC 7120
Method: single particle / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Schur FKM, Loose M

EMDB-55454:
Cryo-electron tomogram of cyanobacterium Anabaena sp. PCC 7120 with putative CorM filaments (Isonet-processed)
Method: electron tomography / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Zens B, Weiss GL, Schur FKM, Loose M

EMDB-55455:
Cryo-electron tomogram of delta-cse mutant cyanobacterium Anabaena sp. PCC 7120 with putative CorM filaments
Method: electron tomography / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Zens B, Weiss GL, Schur FKM, Loose M

PDB-9rmi:
Cryo-EM structure of the CorM filament in the presence of CorR from cyanobacterium Anabaena sp. PCC 7120
Method: single particle / : Springstein BL, Javoor MG, Megrian D, Hajdu R, Hanke DM, Schur FKM, Loose M

EMDB-73615:
Sub-tomogram averaged structure of the non-piliated Tad machine in Caulobacter crescentus
Method: subtomogram averaging / : Iarocci J, Williston RF, Guo S

EMDB-73632:
Sub-tomogram averaged structure of the piliated Tad machine in Caulobacter crescentus
Method: subtomogram averaging / : Iarocci J, Williston RF, Guo S

EMDB-73646:
Sub-tomogram averaged structure of the Tad pilus secretin in Caulobacter crescentus
Method: subtomogram averaging / : Iarocci J, Williston RF, Guo S

EMDB-74561:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 1
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-74562:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 2
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-74563:
Nucleosome with an SSB at SHL -2.8 in complex with human PARP2 and HPF1, Class 1
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-74564:
Nucleosome with an SSB at SHL -2.8 in complex with human PARP2 and HPF1, Class 2
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-75074:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 1, Consensus map
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-75075:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 1, Focused
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-75079:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 2, Consensus map
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-75080:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 2, Focused map
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

PDB-9zq9:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 1
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

PDB-9zqa:
Nucleosome with an SSB at SHL -2.8 in complex with the WGR domain of human PARP2, Class 2
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

PDB-9zqb:
Nucleosome with an SSB at SHL -2.8 in complex with human PARP2 and HPF1, Class 1
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

PDB-9zqc:
Nucleosome with an SSB at SHL -2.8 in complex with human PARP2 and HPF1, Class 2
Method: single particle / : Kim TH, Jayathilake C, Virk RK, Gregory-Lott ER

EMDB-56294:
Plasmodium falciparum gametocyte microtubule with 15 protofilaments determined in situ
Method: subtomogram averaging / : Ferreira JL

EMDB-53571:
13 protofilament P. falciparum paclitaxel stabilised GDP microtubule
Method: helical / : Bangera M, Moores CA

EMDB-53572:
15 protofilament P. falciparum GMPCPP microtubule
Method: helical / : Bangera M, Moores CA

PDB-9r4x:
13 protofilament P. falciparum paclitaxel stabilised GDP microtubule
Method: helical / : Bangera M, Moores CA

PDB-9r4y:
15 protofilament P. falciparum GMPCPP microtubule
Method: helical / : Bangera M, Moores CA

EMDB-56237:
Cryo-EM structure of the extracellular domain of DC-SIGN
Method: single particle / : Balke A, Scheerer P

EMDB-75195:
S305I Frontotemporal Lobar Degeneration (FTLD) type I tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

EMDB-75196:
S305I Frontotemporal Lobar Degeneration (FTLD) type II tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

PDB-10ij:
S305I Frontotemporal Lobar Degeneration (FTLD) type I tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more