[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,041 items for (author: eric & x)

EMDB-63948:
Cryo-EM structure of conivaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

EMDB-63949:
Cryo-EM structure of tolvaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

PDB-9u80:
Cryo-EM structure of conivaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

PDB-9u81:
Cryo-EM structure of tolvaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

EMDB-71801:
Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling
Method: electron tomography / : Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E

EMDB-71954:
Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling 2
Method: electron tomography / : Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E

EMDB-71955:
Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling 3
Method: electron tomography / : Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E

EMDB-71956:
Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling 4
Method: electron tomography / : Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E

EMDB-71957:
Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling 5
Method: electron tomography / : Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E

EMDB-71958:
Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling 6
Method: electron tomography / : Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E

EMDB-71959:
Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling 7
Method: electron tomography / : Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E

EMDB-72056:
Cryo ET of Native Hippocampal Glutamatergic Synapses without AuNP label
Method: electron tomography / : Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E

EMDB-72057:
Cryo ET of Native Hippocampal Glutamatergic Synapses without AuNP label 2
Method: electron tomography / : Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E

EMDB-72058:
Cryo ET of Native Hippocampal Glutamatergic Synapses without AuNP label 3
Method: electron tomography / : Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E

EMDB-72059:
Cryo ET of Native Hippocampal Glutamatergic Synapses without AuNP label 4
Method: electron tomography / : Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E

EMDB-55210:
In situ cryo-ET tomogram of HeLa TMEM192-3xHA Control cell showcasing an endolysosomal structure.
Method: electron tomography / : Kraus F, Li D, Wilfling F, Harper JW

EMDB-55211:
In situ cryo-ET tomogram of HeLa TMEM192-3xHA ASAH1-/- cell showcasing an endolysosomal structure
Method: electron tomography / : Kraus F, Li D, Wilfling F, Harper JW

EMDB-61433:
Cryo-EM structure of [Pen5]-urotensin (4-11)-bounded human Urotensin receptor (UTS2R)-Gq complex
Method: single particle / : Xu HE, You C, Gao T, Duan J

PDB-9jfk:
Cryo-EM structure of [Pen5]-urotensin (4-11)-bounded human Urotensin receptor (UTS2R)-Gq complex
Method: single particle / : Xu HE, You C, Gao T, Duan J

EMDB-61447:
Cryo-EM structure of Adriforant-bound Histamine receptor 4 H4R at inactive state
Method: single particle / : Jin SS, Zhang H, Jiang Y

PDB-9jg1:
Cryo-EM structure of Adriforant-bound Histamine receptor 4 H4R at inactive state
Method: single particle / : Jin SS, Zhang H, Jiang Y

EMDB-52853:
Aerolysin E254A/E258A in styrene-maleic acid lipid particles
Method: single particle / : Anton JS, Bada Juarez JF, Marcaida MJ, Dal Peraro M

PDB-9ign:
Aerolysin E254A/E258A in styrene-maleic acid lipid particles
Method: single particle / : Anton JS, Bada Juarez JF, Marcaida MJ, Dal Peraro M

EMDB-53068:
Cryo-EM map of P. furiosus 70S grown at 95 degrees
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53069:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53070:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53071:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53072:
Consensus cryo-EM map of P furiosus 70S grown at 102degC
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53073:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53074:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53076:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53077:
Consensus cryo-EM map of P. furiosus 70S in RsmB deleted strain
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53078:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53079:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53080:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-48548:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48549:
SARS-CoV-2 S2 monomer in complex with NICA01B-1113 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48550:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

PDB-9mr1:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

PDB-9mr2:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-71113:
ExoSloNano: STA on nucleosomes from cryo-FIB-ET
Method: subtomogram averaging / : Young L, Zhou H, Villa E

EMDB-71202:
ExoSloNano, STA of 1.4 nm NG labeling of the ribosome from vitreous cells
Method: subtomogram averaging / : Young L, Villa E

EMDB-71205:
ExoSloNano proof of principle labeling the ribosome in intact and vitreous cells with 5 nm NG
Method: subtomogram averaging / : Young L, Villa E

EMDB-71211:
ExoSloNano: labeling macroH2A nucleosomes with 1.4 nm NG in intact cells.
Method: subtomogram averaging / : Young L, Huabin Z, Villa E

EMDB-62276:
Cryo-EM structure of LIPID-mediated dimer of human norepinephrine transporter NET in the presence of Vanoxerine in an inward-open state at resolution of 2.52 angstrom
Method: single particle / : Zhang H, Xu EH, Jiang Y

EMDB-62281:
Cryo-EM structure of LIPID-mediated human norepinephrine transporter NET in the presence of Levomilnacipran in an inward-open state at resolution of 2.46 angstrom.
Method: single particle / : Zhang H, Jiang Y, Xu EH

EMDB-62289:
Cryo-EM structure of lipid-mediated dimer of human norepinephrine transporter NET in the presence of the F3288-0031 in an inward-open state at resolution of 3.1 angstrom
Method: single particle / : Zhang H, Zhang TW, Xu EH, Jiang Y

PDB-9kdh:
Cryo-EM structure of LIPID-mediated dimer of human norepinephrine transporter NET in the presence of Vanoxerine in an inward-open state at resolution of 2.52 angstrom
Method: single particle / : Zhang H, Xu EH, Jiang Y

PDB-9kdm:
Cryo-EM structure of LIPID-mediated human norepinephrine transporter NET in the presence of Levomilnacipran in an inward-open state at resolution of 2.46 angstrom.
Method: single particle / : Zhang H, Jiang Y, Xu EH

PDB-9ke3:
Cryo-EM structure of lipid-mediated dimer of human norepinephrine transporter NET in the presence of the F3288-0031 in an inward-open state at resolution of 3.1 angstrom
Method: single particle / : Zhang H, Zhang TW, Xu EH, Jiang Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more