[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 567 items for (author: duan & w)

EMDB-63426:
TMEM164-substrate
Method: single particle / : Zhang MF

PDB-9lw1:
TMEM164-substrate
Method: single particle / : Zhang MF

EMDB-62694:
structure of MCT2-embigin complex
Method: single particle / : Xu B, Wang Y

EMDB-62696:
structure of MCT2-embigin-AR-C155858 complex
Method: single particle / : Xu B, Wang Y

PDB-9l0b:
structure of MCT2-embigin complex
Method: single particle / : Xu B, Wang Y

PDB-9l0c:
structure of MCT2-embigin-AR-C155858 complex
Method: single particle / : Xu B, Wang Y

EMDB-71766:
Cryo-EM structure of J601-1B2 Fab in complex with HIV-1 BG505 DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD

EMDB-71767:
Cryo-EM structure of J601-A6 Fab in complex with HIV-1 BG505 DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-71772:
Cryo-EM structure of K001-A1 Fab in complex with HIV-1 459C-OPT RnS DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-71781:
Cryo-EM structure of HIV-1 459C-WT DS-SOSIP RnS Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-71782:
Cryo-EM structure of HIV-1 459C-ALT DS-SOSIP RnS Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-62557:
HCA3-Gi complex with acifran
Method: single particle / : Wu S

EMDB-62558:
Cryo-EM structure of HCA2-Gi complex with MK6892
Method: single particle / : Wu S

EMDB-62559:
Cryo-EM structure of HCA2-Gi complex with acifran
Method: single particle / : Wu S

EMDB-62560:
Cryo-EM structure of HCA1-Gi complex with 3,5-DHBA
Method: single particle / : Wu S

PDB-9kt6:
HCA3-Gi complex with acifran
Method: single particle / : Wu S, Wu S

PDB-9kt7:
Cryo-EM structure of HCA2-Gi complex with MK6892
Method: single particle / : Wu S, Wu S

PDB-9kt8:
Cryo-EM structure of HCA2-Gi complex with acifran
Method: single particle / : Wu S

PDB-9kt9:
Cryo-EM structure of HCA1-Gi complex with 3,5-DHBA
Method: single particle / : Wu S

EMDB-61168:
Structure of Chikungunya virus infectious particles, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

PDB-9j6d:
Structure of Chikungunya virus infectious particles, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

EMDB-71899:
Structure of V30V4 in complex with SARS-CoV-2 spike
Method: single particle / : Wang YJ, Kibria G, Wesemann D, Chen B

PDB-9pw4:
Structure of V30V4 in complex with SARS-CoV-2 spike
Method: single particle / : Wang YJ, Kibria G, Wesemann D, Chen B

EMDB-60966:
Cryo-EM structure of chikungunya virus glycoprotein E1-E2 with C34 Fab.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

EMDB-60970:
VLP structure of Chikungunya virus, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

PDB-9ixa:
Cryo-EM structure of chikungunya virus glycoprotein E1-E2 with C34 Fab.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

PDB-9ixi:
VLP structure of Chikungunya virus, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

EMDB-71900:
The local refinement map of Structure of V30V4 in complex with SARS-CoV-2 spike
Method: single particle / : Wang YJ, Kibria G, Wesemann D, Chen B

EMDB-60997:
VLP structure of Chikungunya virus complexed with C34 Fab, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

PDB-9iyi:
VLP structure of Chikungunya virus complexed with C34 Fab, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

EMDB-70618:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 bound with butyrolactol A in the E2P state
Method: single particle / : Duan HD, Li H

PDB-9omv:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 bound with butyrolactol A in the E2P state
Method: single particle / : Duan HD, Li H

EMDB-64215:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of ATP
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64216:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Ap4A
Method: single particle / : Duan W, Serganov A

EMDB-64218:
CryoEM structure of the T.thermophilus transcription initiation complex bound to ATP-C, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64219:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Up4A
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64250:
CryoEM structure of the T.thermophilus transcription initiation complex
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64251:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Ap4A-C, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64252:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Ap4A-C, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64253:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Gp4A, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64254:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Gp4A-C-U and CTP, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64255:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Gp4A-C, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64266:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Up4A-C and Up4A, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64267:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Up4A-C and UTP, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64271:
CryoEM structure of T.thermophilus transcription initiation complex bound to Gp4A-C, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64404:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Gp4A, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

PDB-9ujk:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of ATP
Method: single particle / : Duan W, Kaushik A, Serganov A

PDB-9ujl:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Ap4A
Method: single particle / : Duan W, Serganov A

PDB-9ujn:
CryoEM structure of the T.thermophilus transcription initiation complex bound to ATP-C, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

PDB-9ujp:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Up4A
Method: single particle / : Duan W, Kaushik A, Serganov A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more