[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 273 items for (author: choo & s)


EMDB Unreleased entry

EMDB-71742:
Epitope editing of CD90 protects hematopoietic stem cells from immunotherapy and enables targeted enrichment for gene therapy
Method: single particle / : Choo S, Radtke S, Rupert PB, Tong AH, Swing K, Repele A, Starrs M, Humphreys T, Darari A, Strong RK, Keim HP

PDB-9pms:
Epitope editing of CD90 protects hematopoietic stem cells from immunotherapy and enables targeted enrichment for gene therapy
Method: single particle / : Choo S, Radtke S, Rupert PB, Tong AH, Swing K, Repele A, Starrs M, Humphreys T, Darari A, Strong RK, Keim HP

EMDB-55800:
Integrin AlphaIIbBeta3 bound to Fab of the anti-HPA-1a antibody 26.4
Method: single particle / : de Pereda JM, Stam W, Gragera M, van der Meer F, Chichon FJ, Zarkadas E, van der Schoot E, Vidarsson G, Takagi J, Margadant C

PDB-9td2:
Integrin AlphaIIbBeta3 bound to Fab of the anti-HPA-1a antibody 26.4
Method: single particle / : de Pereda JM, Stam W, Gragera M, van der Meer F, Chichon FJ, Zarkadas E, van der Schoot E, Vidarsson G, Takagi J, Margadant C

EMDB-75437:
Importin-9 bound to ETS homologous factor (EHF)
Method: single particle / : Bernardes NE, Lankford K, McConville M, Chook YM, Liszczak G

PDB-10sm:
Importin-9 bound to ETS homologous factor (EHF)
Method: single particle / : Bernardes NE, Lankford K, McConville M, Chook YM, Liszczak G

EMDB-70458:
Cryo-EM structure of human full-length XPO1 (unliganded)
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70459:
Cryo-EM structure of human full-length XPO1 conjugated with selinexor
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70460:
Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to yeast RAN-GTP and human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70461:
Cryo-EM structure of human exportin-1 conjugated with KPT-185 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70462:
Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to human ASB8(R197A)-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70463:
Cryo-EM structure of human exportin-1 conjugated with KPT-127 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70464:
Cryo-EM structure of human exportin-1 conjugated with KPT-UTSW1 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9og9:
Cryo-EM structure of human full-length XPO1 (unliganded)
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9oga:
Cryo-EM structure of human full-length XPO1 conjugated with selinexor
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9ogb:
Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to yeast RAN-GTP and human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9ogc:
Cryo-EM structure of human exportin-1 conjugated with KPT-185 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9ogd:
Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to human ASB8(R197A)-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9oge:
Cryo-EM structure of human exportin-1 conjugated with KPT-127 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9ogf:
Cryo-EM structure of human exportin-1 conjugated with KPT-UTSW1 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-60751:
Cryo-EM structure of ClpB1 heptamer from Oryza sativa
Method: single particle / : Jobichen C, Saharan K, Vasudevan D, Sivaraman J

PDB-9ip0:
Cryo-EM structure of ClpB1 heptamer from Oryza sativa
Method: single particle / : Jobichen C, Saharan K, Vasudevan D, Sivaraman J

EMDB-46548:
Cryo-EM structure of unliganded yeast Exportin Msn5
Method: single particle / : Fung HYJ, Chook YM

EMDB-46549:
Cryo-EM structure of yeast Exportin Msn5 bound to cargo Pho4 and RanGTP
Method: single particle / : Fung HYJ, Chook YM

EMDB-46556:
Cryo-EM Map of yeast Exportin Msn5 bound to cargo Pho4 and RanGTP (State 3-2)
Method: single particle / : Fung HYJ, Chook YM

EMDB-46557:
Cryo-EM map of yeast Exportin Msn5 bound to cargo Pho4 and RanGTP (State 1-2)
Method: single particle / : Fung HYJ, Chook YM

EMDB-46560:
Cryo-EM map of yeast Exportin Msn5 bound to cargo Pho4 and RanGTP (State 2-2)
Method: single particle / : Fung HYJ, Chook YM

EMDB-46561:
Cryo-EM map of yeast Exportin Msn5 bound to cargo Pho4 (full-length) and RanGTP (State 3)
Method: single particle / : Fung HYJ, Chook YM

EMDB-46562:
Cryo-EM map of yeast Exportin Msn5 bound to cargo Pho4 (full-length) and RanGTP (State 1)
Method: single particle / : Fung HYJ, Chook YM

EMDB-47291:
Cryo-EM structure of yeast Exportin Msn5 bound to RanGTP and Pho4 (not modeled) (State 2-1)
Method: single particle / : Fung HYJ, Chook YM

EMDB-47325:
Cryo-EM structure of yeast Exportin Msn5 bound to RanGTP and Pho4 (not modeled) (State 3-1)
Method: single particle / : Fung HYJ, Chook YM

PDB-9d43:
Cryo-EM structure of unliganded yeast Exportin Msn5
Method: single particle / : Fung HYJ, Chook YM

PDB-9d45:
Cryo-EM structure of yeast Exportin Msn5 bound to cargo Pho4 and RanGTP
Method: single particle / : Fung HYJ, Chook YM

PDB-9dxm:
Cryo-EM structure of yeast Exportin Msn5 bound to RanGTP and Pho4 (not modeled) (State 2-1)
Method: single particle / : Fung HYJ, Chook YM

PDB-9dz6:
Cryo-EM structure of yeast Exportin Msn5 bound to RanGTP and Pho4 (not modeled) (State 3-1)
Method: single particle / : Fung HYJ, Chook YM

EMDB-44095:
Cryo-EM structure of Nap1 core
Method: single particle / : Jiou J, Fung HYJ, Chook YM

EMDB-44120:
Cryo-EM structure of yeast (Nap1)2-Kap114-H2A-H2B
Method: single particle / : Jiou J, Fung HYJ, Chook YM

EMDB-44121:
Local refined map for Nap1 region from (Nap1)2-Kap114-H2A-H2B structure
Method: single particle / : Jiou J, Fung HYJ, Chook YM

EMDB-44122:
Consensus volume for (Nap1)2-Kap114-H2A-H2B
Method: single particle / : Jiou J, Fung HYJ, Chook YM

EMDB-44136:
Cryo-EM structure of yeast (Nap1)2-H2A-H2B-Kap114
Method: single particle / : Jiou J, Fung HYJ, Chook YM

EMDB-44137:
Locally refined map for Nap1 and H2A-H2B in (Nap1)2-H2A-H2B-Kap114 structure
Method: single particle / : Jiou J, Fung HYJ, Chook YM

EMDB-44140:
Consensus volume for (Nap1)2-H2A-H2B-Kap114 structure
Method: single particle / : Jiou J, Fung HYJ, Chook YM

EMDB-44141:
Cryo-EM structure of yeast (Nap1)2-H2A-H2B-Kap114-RanGTP
Method: single particle / : Fung HYJ, Jiou J, Chook YM

EMDB-44150:
Local refined map for Nap1 and H2A-H2B region in (Nap1)2-H2A-H2B-Kap114-RanGTP structure
Method: single particle / : Fung HYJ, Jiou J, Chook YM

EMDB-44151:
Consensus volume for (Nap1)2-H2A-H2B-Kap114-RanGTP
Method: single particle / : Fung HYJ, Jiou J, Chook YM

PDB-9b23:
Cryo-EM structure of Nap1 core
Method: single particle / : Jiou J, Fung HYJ, Chook YM

PDB-9b31:
Cryo-EM structure of yeast (Nap1)2-Kap114-H2A-H2B
Method: single particle / : Jiou J, Fung HYJ, Chook YM

PDB-9b3f:
Cryo-EM structure of yeast (Nap1)2-H2A-H2B-Kap114
Method: single particle / : Jiou J, Fung HYJ, Chook YM

PDB-9b3i:
Cryo-EM structure of yeast (Nap1)2-H2A-H2B-Kap114-RanGTP
Method: single particle / : Fung HYJ, Jiou J, Chook YM

EMDB-41869:
BG505.664 SOSIP in complex with polyclonal antibodies from NHP 8131 (gp120 glycan hole, gp41 glycan hole/fusion peptide and trimer base epitopes)
Method: single particle / : Zhang S, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more