[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 97 items for (author: burgess & a)

EMDB-55309:
Human ADP-forming succinyl-CoA ligase complex SUCLG1-SUCLA2 bound to coenzyme A
Method: single particle / : Bailey HJ, McCorvie TJ, Shrestha L, Rembeza E, Strain-Damerell C, Burgess-Brown N, Yue WW

PDB-9swj:
Human ADP-forming succinyl-CoA ligase complex SUCLG1-SUCLA2 bound to coenzyme A
Method: single particle / : Bailey HJ, McCorvie TJ, Shrestha L, Rembeza E, Strain-Damerell C, Burgess-Brown N, Yue WW

EMDB-50405:
EM Map of KCC3b (SLC12A6b) in Complex with Nanobody Binder BN001T-N
Method: single particle / : Chi G, Bohstedt T, Stefanic S, Castro-Hartmann P, Qian P, Burgess-Brown N, Sader K, Duerr KL, Sauer DB

EMDB-50364:
EM Map of KCC3b (SLC12A6b) in Complex with Nanobody Binder BN001M-T
Method: single particle / : Chi G, Bohstedt T, Stefanic S, Castro-Hartmann P, Qian P, Burgess-Brown N, Sader K, Duerr KL, Sauer DB

EMDB-50406:
EM Map of KCC3b (SLC12A6b) in Complex with Nanobody Binder BN006A-P
Method: single particle / : Chi G, Bohstedt T, Geertsma E, Castro-Hartmann P, Qian P, Burgess-Brown N, Sader K, Duerr KL, Sauer DB

EMDB-50407:
EM Map of KCC3b (SLC12A6b) in Complex with Nanobody Binder BN001P-S
Method: single particle / : Chi G, Bohstedt T, Stefanic S, Castro-Hartmann P, Qian P, Burgess-Brown N, Sader K, Duerr KL, Sauer DB

EMDB-44638:
Structure of the human DDD-Ube2e2 complex
Method: single particle / : Loughran T, Turk LS, Brown SHJ, Mace PD

PDB-9bjz:
Structure of the human DDD-Ube2e2 complex
Method: single particle / : Loughran T, Turk LS, Brown SHJ, Mace PD

EMDB-18667:
Structure of human SPNS2 in LMNG
Method: single particle / : Li HZ, Pike ACW, McKinley G, Mukhopadhyay SMM, Moreau C, Scacioc A, Abrusci P, Borkowska O, Chalk R, Stefanic S, Burgess-Brown N, Duerr KL, Sauer DB

EMDB-18668:
Structure of human SPNS2 in DDM
Method: single particle / : Li HZ, Pike ACW, McKinley G, Mukhopadhyay SMM, Moreau C, Scacioc A, Abrusci P, Borkowska O, Chalk R, Stefanic S, Burgess-Brown N, Duerr KL, Sauer DB

PDB-8qv5:
Structure of human SPNS2 in LMNG
Method: single particle / : Li HZ, Pike ACW, McKinley G, Mukhopadhyay SMM, Moreau C, Scacioc A, Abrusci P, Borkowska O, Chalk R, Stefanic S, Burgess-Brown N, Duerr KL, Sauer DB

PDB-8qv6:
Structure of human SPNS2 in DDM
Method: single particle / : Li HZ, Pike ACW, McKinley G, Mukhopadhyay SMM, Moreau C, Scacioc A, Abrusci P, Borkowska O, Chalk R, Stefanic S, Burgess-Brown N, Duerr KL, Sauer DB

EMDB-17377:
Structure of human SIT1 (focussed map / refinement)
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

EMDB-17378:
Structure of human SIT1:ACE2 complex (open PD conformation)
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

EMDB-17379:
Structure of human SIT1:ACE2 complex (closed PD conformation)
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

EMDB-17380:
Structure of human SIT1 bound to L-pipecolate (focussed map / refinement)
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

EMDB-17381:
Structure of human SIT1:ACE2 complex (open PD conformation) bound to L-pipecolate
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

EMDB-17382:
Structure of human SIT1:ACE2 complex (closed PD conformation) bound to L-pipecolate
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

PDB-8p2w:
Structure of human SIT1 (focussed map / refinement)
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

PDB-8p2x:
Structure of human SIT1:ACE2 complex (open PD conformation)
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

PDB-8p2y:
Structure of human SIT1:ACE2 complex (closed PD conformation)
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

PDB-8p2z:
Structure of human SIT1 bound to L-pipecolate (focussed map / refinement)
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

PDB-8p30:
Structure of human SIT1:ACE2 complex (open PD conformation) bound to L-pipecolate
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

PDB-8p31:
Structure of human SIT1:ACE2 complex (closed PD conformation) bound to L-pipecolate
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

EMDB-17197:
Human TPC2 in Complex with Antagonist (S)-SG-094
Method: single particle / : Chi G, Pike ACW, Maclean EM, Li H, Mukhopadhyay SMM, Bohstedt T, Wang D, McKinley G, Fernandez-Cid A, Duerr K

EMDB-19108:
Human TPC2 in Complex withAntagonist (R)-SG-094
Method: single particle / : Chi G, Pike ACW, Maclean EM, Li H, Mukhopadhyay SMM, Bohstedt T, Wang D, McKinley G, Fernandez-Cid A, Duerr K

PDB-8ouo:
Human TPC2 in Complex with Antagonist (S)-SG-094
Method: single particle / : Chi G, Pike ACW, Maclean EM, Li H, Mukhopadhyay SMM, Bohstedt T, Wang D, McKinley G, Fernandez-Cid A, Duerr K

EMDB-18729:
Cryo-EM structure of tetrameric human SAMHD1 with dApNHpp
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

EMDB-18730:
Cryo-EM structure of tetrameric human SAMHD1 State I - Tense
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

EMDB-18731:
Cryo-EM structure of tetrameric human SAMHD1 State II - Hemi-relaxed
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

EMDB-18732:
Cryo-EM structure of tetrameric human SAMHD1 State III - Relaxed
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

EMDB-18733:
Cryo-EM structure of tetrameric human SAMHD1 State IV - Depleted relaxed
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

EMDB-18734:
Cryo-EM structure of tetrameric human SAMHD1 State V - Depleted relaxed
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

PDB-8qxj:
Cryo-EM structure of tetrameric human SAMHD1 with dApNHpp
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

PDB-8qxk:
Cryo-EM structure of tetrameric human SAMHD1 State I - Tense
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

PDB-8qxl:
Cryo-EM structure of tetrameric human SAMHD1 State II - Hemi-relaxed
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

PDB-8qxm:
Cryo-EM structure of tetrameric human SAMHD1 State III - Relaxed
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

PDB-8qxn:
Cryo-EM structure of tetrameric human SAMHD1 State IV - Depleted relaxed
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

PDB-8qxo:
Cryo-EM structure of tetrameric human SAMHD1 State V - Depleted relaxed
Method: single particle / : Acton OJ, Sheppard D, Rosenthal PB, Taylor IA

EMDB-16110:
Human Urea Transporter UT-A (N-Terminal Domain Model)
Method: single particle / : Chi G, Pike ACW, Maclean EM, Mukhopadhyay SMM, Bohstedt T, Scacioc A, Wang D, McKinley G, Fernandez-Cid A, Arrowsmith CH, Bountra C, Edwards A, Burgess-Brown NA, van Putte W, Duerr K

EMDB-16111:
Map of Human Urea Transporter UT-A Collected with 0 and 30 Degree Tilts
Method: single particle / : Chi G, Pike ACW, Maclean EM, Bohstedt T, Wang D, Mckinley G, Fernandez-Cid A, Mukhopadhyay SMM, Burgess-Brown NA, Edwards A, Arrowsmith C, Bountra C, Duerr KL

EMDB-16112:
Human Urea Transporter UT-B/UT1 in Complex with Inhibitor UTBinh-14
Method: single particle / : Chi G, Dietz L, Pike ACW, Maclean EM, Mukhopadhyay SMM, Bohstedt T, Wang D, Scacioc A, McKinley G, Arrowsmith CH, Edwards A, Bountra C, Fernandez-Cid A, Burgess-Brown NA, Duerr KL

PDB-8blo:
Human Urea Transporter UT-A (N-Terminal Domain Model)
Method: single particle / : Chi G, Pike ACW, Maclean EM, Mukhopadhyay SMM, Bohstedt T, Scacioc A, Wang D, McKinley G, Fernandez-Cid A, Arrowsmith CH, Bountra C, Edwards A, Burgess-Brown NA, van Putte W, Duerr K

PDB-8blp:
Human Urea Transporter UT-B/UT1 in Complex with Inhibitor UTBinh-14
Method: single particle / : Chi G, Dietz L, Pike ACW, Maclean EM, Mukhopadhyay SMM, Bohstedt T, Wang D, Scacioc A, McKinley G, Arrowsmith CH, Edwards A, Bountra C, Fernandez-Cid A, Burgess-Brown NA, Duerr KL

EMDB-18301:
In-tissue cryo electron tomograms of App^NL-G-F amyloid plaques
Method: electron tomography / : Leistner C, Wilkinson M, Burgess A, Lovatt M, Goodbody S, Xu Y, Deuchars S, Radford SE, Ranson NA, Frank RAW

EMDB-16018:
Sarkosyl-extracted AppNL-G-F Abeta42 fibril structure
Method: helical / : Wilkinson M, Leistner C, Burgess A, Goodfellow S, Deuchars S, Ranson NA, Radford SE, Frank RAW

EMDB-16019:
Sarkosyl-extracted AppNL-G-F Abeta42 fibril structure (Methoxy-X04-labelled mice)
Method: helical / : Wilkinson M, Leistner C, Burgess A, Goodfellow S, Deuchars S, Ranson NA, Radford SE, Frank RAW

PDB-8bfa:
Sarkosyl-extracted AppNL-G-F Abeta42 fibril structure
Method: helical / : Wilkinson M, Leistner C, Burgess A, Goodfellow S, Deuchars S, Ranson NA, Radford SE, Frank RAW

PDB-8bfb:
Sarkosyl-extracted AppNL-G-F Abeta42 fibril structure (Methoxy-X04-labelled mice)
Method: helical / : Wilkinson M, Leistner C, Burgess A, Goodfellow S, Deuchars S, Ranson NA, Radford SE, Frank RAW

PDB-7or0:
Cryo-EM structure of the human TRPA1 ion channel in complex with the antagonist 3-60, conformation 2
Method: single particle / : Grieben M, Pike ACW, Saward BG, Wang D, Mukhopadhyay SMM, Moreira T, Chalk R, MacLean EM, Marsden BD, Burgess-Brown NA, Bountra C, Schofield CJ, Carpenter EP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more