[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 72 items for (author: blum & t)

EMDB-18540:
human connexin-36 gap junction channel in complex with mefloquine
Method: single particle / : Ding XY, Blum TB, Korkhov VM

EMDB-18987:
human connexin-36 gap junction channel
Method: single particle / : Ding XY, Blum TB, Korkhov VM

EMDB-18988:
human connexin-36 gap junction channel in complex with quinine
Method: single particle / : Ding XY, Blum TB, Korkhov VM

PDB-8qoj:
human connexin-36 gap junction channel in complex with mefloquine
Method: single particle / : Ding XY, Blum TB, Korkhov VM

PDB-8r7p:
human connexin-36 gap junction channel
Method: single particle / : Ding XY, Blum TB, Korkhov VM

PDB-8r7q:
human connexin-36 gap junction channel in complex with quinine
Method: single particle / : Ding XY, Blum TB, Korkhov VM

EMDB-19163:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

EMDB-19164:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

EMDB-19165:
Trimeric HSV-2F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

EMDB-19166:
Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

PDB-8rgz:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

PDB-8rh0:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

PDB-8rh1:
Trimeric HSV-2F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

PDB-8rh2:
Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Method: single particle / : Kalbermatter D, Seyfizadeh N, Imhof T, Ries M, Mueller C, Jenner L, Blumenschein E, Yendrzheyevskiy A, Moog K, Eckert D, Engel R, Diebolder P, Chami M, Krauss J, Schaller T, Arndt M

EMDB-17208:
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17212:
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
Method: single particle / : Rajan KS, Yonath A

EMDB-17249:
CRYO-EM CONSENSUS MAP OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17250:
CRYO-EM FOCUSED REFINEMENT MAPS OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-17254:
CRYO-EM CONSENSUS MAP OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 SKO
Method: single particle / : RAJAN KS, YONATH A

EMDB-17255:
CRYO-EM FOCUSED REFINEMENT OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
Method: single particle / : Rajan KS, Yonath A

PDB-8ova:
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8ove:
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
Method: single particle / : Rajan KS, Yonath A

EMDB-28959:
DNA replication fork binding triggers structural changes in the PriA DNA helicase that regulate the PriA-PriB replication restart pathway in E. coli
Method: single particle / : Duckworth AT, Ducos PL, McMillan SD, Satyshur KA, Blumenthal KH, Deorio HR, Larson JA, Sandler SJ, Grant T, Keck JL

PDB-8fak:
DNA replication fork binding triggers structural changes in the PriA DNA helicase that regulate the PriA-PriB replication restart pathway in E. coli
Method: single particle / : Duckworth AT, Ducos PL, McMillan SD, Satyshur KA, Blumenthal KH, Deorio HR, Larson JA, Sandler SJ, Grant T, Keck JL

EMDB-14634:
Cryo-EM structure of GMPCPP-microtubules in complex with VASH2-SVBP
Method: single particle / : Choi SR, Blum T, Steinmetz MO

PDB-7zcw:
Cryo-EM structure of GMPCPP-microtubules in complex with VASH2-SVBP
Method: single particle / : Choi SR, Blum T, Steinmetz MO

EMDB-13642:
Alpha-latrocrustotoxin monomer
Method: single particle / : Chen M, Gatsogiannis C

EMDB-13643:
Delta-latroinsectotoxin dimer
Method: single particle / : Chen M, Gatsogiannis C

PDB-7ptx:
Alpha-latrocrustotoxin monomer
Method: single particle / : Chen M, Gatsogiannis C

PDB-7pty:
Delta-latroinsectotoxin dimer
Method: single particle / : Chen M, Gatsogiannis C

EMDB-24318:
Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C032
Method: single particle / : DeLaitsch AT, Barnes CO, Bjorkman PJ

EMDB-24319:
Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C051
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-24320:
Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C548
Method: single particle / : DeLaitsch AT, Barnes CO, Bjorkman PJ

PDB-7r8m:
Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C032
Method: single particle / : DeLaitsch AT, Barnes CO, Bjorkman PJ

PDB-7r8n:
Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C051
Method: single particle / : Barnes CO, Bjorkman PJ

PDB-7r8o:
Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C548
Method: single particle / : DeLaitsch AT, Barnes CO, Bjorkman PJ

EMDB-24404:
Covalent inhibition of hAChE by organophosphates causes homodimer dissociation through long-range allosteric effects
Method: single particle / : Blumenthal DK, Cheng X, Fager M, Ho KY, Rohrer J, Gerlits O, Juneja P, Kovalevsky A, Radic Z

EMDB-23693:
Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG10-19
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-23694:
Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG1-22
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-23695:
Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG7-15
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-23696:
Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, BG7-20
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-23697:
Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, BG1-24
Method: single particle / : Barnes CO, Bjorkman PJ

PDB-7m6e:
Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG10-19
Method: single particle / : Barnes CO, Bjorkman PJ

PDB-7m6f:
Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG1-22
Method: single particle / : Barnes CO, Bjorkman PJ

PDB-7m6g:
Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG7-15
Method: single particle / : Barnes CO, Bjorkman PJ

PDB-7m6h:
Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, BG7-20
Method: single particle / : Barnes CO, Bjorkman PJ

PDB-7m6i:
Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, BG1-24
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-12696:
Amyloid beta oligomer displayed on the alpha hemolysin scaffold
Method: single particle / : Wu J, Blum TB, Farrell DP, DiMaio F, Abrahams JP, Luo J

PDB-7o1q:
Amyloid beta oligomer displayed on the alpha hemolysin scaffold
Method: single particle / : Wu J, Blum TB, Farrell DP, DiMaio F, Abrahams JP, Luo J

EMDB-11022:
Allostery through DNA drives phenotype switching
Method: single particle / : Rosenblum G, Elad N

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more