[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,142 items for (author: ali & k)

EMDB-44639:
HCMV A-capsid vertex
Method: single particle / : Zhou H, Stevens A

EMDB-44640:
HCMV B-capsid vertex
Method: single particle / : Zhou H, Stevens A

EMDB-44647:
HCMV AD169 pp150 R40E, R251E, K255E A-capsid vertex
Method: single particle / : Zhou H, Stevens A

EMDB-44648:
HCMV AD169 pp150 R40E, R251E, K255E B-capsid vertex
Method: single particle / : Zhou H, Stevens A

EMDB-41945:
Locally refined (symmetry based) cryo-EM map of the dimer of the SPARTA oligomer with guide RNA and target DNA
Method: single particle / : Malik R, Kottur J, Aggarwal AK

EMDB-41947:
Locally refined (symmetry based) cryo-EM map of the second dimer of the SPARTA oligomer with guide RNA and target DNA
Method: single particle / : Malik R, Kottur J, Aggarwal AK

EMDB-41948:
Focused refined cryo-EM map of the TIR domains of the SPARTA oligomer
Method: single particle / : Malik R, Kottur J, Aggarwal AK

EMDB-41959:
Original Cryo-EM map of the SPARTA oligomer with guide RNA and target DNA
Method: single particle / : Malik R, Kottur J, Aggarwal AK

EMDB-41966:
Cryo-EM structure of the SPARTA oligomer with guide RNA and target DNA
Method: single particle / : Malik R, Kottur J, Aggarwal AK

PDB-8u72:
Cryo-EM structure of the SPARTA oligomer with guide RNA and target DNA
Method: single particle / : Malik R, Kottur J, Aggarwal AK

EMDB-50356:
Empty capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Method: single particle / : Bardy P, MacDonald CIW, Jenkins HT, Byrom L, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Fogg PCM, Antson AA

EMDB-50357:
Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Method: single particle / : Bardy P, MacDonald CIW, Jenkins HT, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Fogg PCM, Antson AA

EMDB-50359:
Rhodobacter microvirus Ebor attached to B10 host cell reconstructed by single particle analysis with applied C5 symmetry
Method: single particle / : Bardy P, MacDonald CIW, Jenkins HT, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Fogg PCM, Antson AA

EMDB-50360:
Rhodobacter microvirus Ebor attached to the outer membrane vesicle
Method: subtomogram averaging / : Bardy P, Blaza JN, Jenkins HT, Nicholas TR, Konig HC, Alim NTB, Hart SJ, Turkenburg JP, Fogg PCM, Beatty JT, Antson AA

EMDB-50361:
Rhodobacter microvirus Ebor attached to the host cell reconstructed by subtomogram averaging
Method: subtomogram averaging / : Bardy P, Traore DAK, Blaza JN, Jenkins HT, Nicholas TR, Hart SJ, Turkenburg JP, Fogg PCM, Antson AA

EMDB-40968:
Atomic model of the mammalian Mediator complex with MED26 subunit
Method: single particle / : Zhao H, Asturias F

EMDB-40972:
CryoEM map of TR-TRAP
Method: single particle / : Zhao H, Asturias F

EMDB-17528:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17529:
CryoEM structure of METTL6 tRNA SerRS complex in a 2:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17530:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:1:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17531:
SerRS bound to serine tRNA
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17532:
Serine tRNA from Trichoplusia ni
Method: single particle / : Throll P, Dolce LG, Kowalinski E

PDB-8p7b:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

PDB-8p7c:
CryoEM structure of METTL6 tRNA SerRS complex in a 2:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

PDB-8p7d:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:1:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-40975:
CryoEM map of mouse mediator complex with alternate conformation CKM module
Method: single particle / : Zhao H, Asturias F

EMDB-40261:
DDB1/CRBN in complex with ARV-471 and the ER ligand-binding domain
Method: single particle / : Digianantonio K, Drulyte I, Gough S, Bekes M, Taylor I

EMDB-42884:
Microtubule-TTLL6 map
Method: single particle / : Mahalingan KK, Grotjahn D, Li Y, Lander GC, Zehr EA, Roll-Mecak A

PDB-8u3z:
Model of TTLL6 bound to microtubule from composite map
Method: single particle / : Mahalingan KK, Grotjahn D, Li Y, Lander GC, Zehr EA, Roll-Mecak A

EMDB-41022:
Map of Tubulin Tyrosine Ligase Like 6
Method: single particle / : Mahalingan KK, Grotjahn D, Li Y, Lander GC, Zehr EA, Roll-Mecak A

EMDB-41090:
Composite map of TTLL6 bound to unmodified human microtubule
Method: single particle / : Mahalingan KK, Grotjahn D, Li Y, Lander GC, Zehr EA, Roll-Mecak A

EMDB-41152:
Cryo-EM Structure of Spike Glycoprotein from Civet Coronavirus SZ3 in Closed Conformation
Method: single particle / : Bostina M, Hills FR, Eruera A

PDB-8tc5:
Cryo-EM Structure of Spike Glycoprotein from Civet Coronavirus SZ3 in Closed Conformation
Method: single particle / : Bostina M, Hills FR, Eruera A

EMDB-19576:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-19582:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8rxh:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-8rxx:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-41371:
Cryo-EM structure of the Rev1-Polzeta-DNA-dCTP complex
Method: single particle / : Malik R, Aggarwal AK

EMDB-41372:
Cryo-EM structure of Rev1(deltaN)-Polzeta-DNA-dCTP complex
Method: single particle / : Malik R, Aggarwal AK

PDB-8tlq:
Cryo-EM structure of the Rev1-Polzeta-DNA-dCTP complex
Method: single particle / : Malik R, Aggarwal AK

PDB-8tlt:
Cryo-EM structure of Rev1(deltaN)-Polzeta-DNA-dCTP complex
Method: single particle / : Malik R, Aggarwal AK

EMDB-29560:
5-MeO-DMT-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Method: single particle / : Warren AL, Zilberg G, Capper MJ, Wacker D

EMDB-29571:
4-F, 5-MeO-PyrT-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Method: single particle / : Warren AL, Zilberg G, Capper MJ, Wacker D

EMDB-29585:
Vilazodone-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Method: single particle / : Warren AL, Zilberg G, Capper MJ, Wacker D

EMDB-29597:
LSD-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Method: single particle / : Warren AL, Zilberg G, Capper MJ, Wacker D

EMDB-29599:
Buspirone-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Method: single particle / : Warren AL, Zilberg G, Capper MJ, Wacker D

PDB-8fy8:
5-MeO-DMT-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Method: single particle / : Warren AL, Zilberg G, Capper MJ, Wacker D

PDB-8fye:
4-F, 5-MeO-PyrT-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Method: single particle / : Warren AL, Zilberg G, Capper MJ, Wacker D

PDB-8fyl:
Vilazodone-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Method: single particle / : Warren AL, Zilberg G, Capper MJ, Wacker D

PDB-8fyt:
LSD-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Method: single particle / : Warren AL, Zilberg G, Capper MJ, Wacker D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more