[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 271 items for (author: adams & c)

EMDB-52347:
Salmonella enterica Lamassu LmuACB in nuclease sequestration state
Method: single particle / : Li Y, Gruber S

EMDB-52349:
Salmonella enterica Lamassu LmuACB bound to DNA duplex
Method: single particle / : Li Y, Gruber S

EMDB-52355:
Salmonella enterica Lamassu LmuA nuclease tetramer bound to DNA duplex
Method: single particle / : Li Y, Gruber S

PDB-9hqu:
Salmonella enterica Lamassu LmuACB in nuclease sequestration state
Method: single particle / : Li Y, Gruber S

PDB-9hqx:
Salmonella enterica Lamassu LmuACB bound to DNA duplex
Method: single particle / : Li Y, Gruber S

PDB-9hr5:
Salmonella enterica Lamassu LmuA nuclease tetramer bound to DNA duplex
Method: single particle / : Li Y, Gruber S

EMDB-52050:
Outward-open structure of human serotonin transporter bound to vilazodone
Method: single particle / : Kalenderoglou IE, Tillmann P, Loland CJ

EMDB-48541:
WorABC region of the electron bifurcating Tungstopyranopterin-containing oxidoreductase WorABCSL with NADH
Method: single particle / : Feng X, Li H

EMDB-48542:
Electron bifurcating tungstopyranopterin-containing aldehyde oxidoreductase WorABCSL with NADH
Method: single particle / : Feng X, Li H

EMDB-48543:
Electron-bifurcating Tungstopyranopterin-containing aldehyde oxidoreductase with NADH
Method: single particle / : Feng X, Li H

EMDB-48545:
electron-bifurcating tungstopyranopterin-containing aldehyde oxidoreductase WorABCSL
Method: single particle / : Feng X, Li H

PDB-9mqx:
Electron-bifurcating Tungstopyranopterin-containing aldehyde oxidoreductase with NADH
Method: single particle / : Feng X, Li H

EMDB-49340:
Cryo-EM map of the Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

EMDB-49341:
Cryo-EM composite map of the NADPH-bound Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

EMDB-49342:
Cryo-EM consensus map of the NADPH-bound Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

EMDB-49343:
Cryo-EM focus map of the NADPH-bound Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

PDB-9nez:
Structure of the Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

PDB-9nf0:
Structure of the NADPH-bound Pyrococcus furiosus SHI complex
Method: single particle / : Xiao X, Li H

EMDB-53281:
Single particle cryo-EM structure of the multidrug efflux pump MdtF from Escherichia coli
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

EMDB-53282:
Single particle cryo-EM structure of MdtF V610F
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

EMDB-53283:
Single particle cryo-EM structure of MdtF V610F with bound Rhodamine 6G
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

PDB-9qpr:
Single particle cryo-EM structure of the multidrug efflux pump MdtF from Escherichia coli
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

PDB-9qps:
Single particle cryo-EM structure of MdtF V610F
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

PDB-9qpt:
Single particle cryo-EM structure of MdtF V610F with bound Rhodamine 6G
Method: single particle / : Lawrence R, Adams C, Sousa JS, Ahdash Z, Reading E

EMDB-49039:
Cryo-EM map of the Thermococcus sibiricus NfnABC complex
Method: single particle / : Xiao X, Li H

EMDB-49040:
Cryo-EM map of the NAD(H)-bound Thermococcus sibiricus NfnABC complex
Method: single particle / : Xiao X, Li H

PDB-9n5u:
Structure of the Thermococcus sibiricus NfnABC complex
Method: single particle / : Xiao X, Li H

PDB-9n5v:
Structure of the NAD(H)-bound Thermococcus sibiricus NfnABC complex
Method: single particle / : Xiao X, Li H

EMDB-49104:
WEEV McMillan VLP in complex with VLDLR-LBD-Fc ASU
Method: single particle / : Raju S, Diamond MS, Fremont DH

EMDB-49105:
WEEV McMillan VLP Apo
Method: single particle / : Raju S, Diamond MS, Fremont DH

EMDB-49106:
SINV-WEEV Fleming in complex with VLDLR-LBD-Fc ASU
Method: single particle / : Raju S, Diamond MS, Fremont DH

EMDB-47104:
CryoEM Structure of Human BTN2A1 ectodomain in complex with TCR-blocking 2A1.12 Fab
Method: single particle / : Ramesh A, Fuller JR, Roy S, Adams E

PDB-9dpe:
CryoEM Structure of Human BTN2A1 ectodomain in complex with TCR-blocking 2A1.12 Fab
Method: single particle / : Ramesh A, Fuller JR, Roy S, Adams E

EMDB-47775:
WEEV CBA87 VLP in complex with human PCDH10-EC1
Method: single particle / : Raju S, Diamond MS, Fremont DH, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-47821:
WEEV McMillan VLP in complex with VLDLR LA(1-2)
Method: single particle / : Raju S, Diamond MS, Fremont DH, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-47822:
SINV-WEEV Fleming in complex with VLDLR LA(1-2)
Method: single particle / : Raju S, Diamond MS, Fremont DH, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-47846:
RRV DKTA VLP in complex with VLDLR-LBD-Fc
Method: single particle / : Raju S, Diamond MS, Fremont DH, Center for Structural Biology of Infectious Diseases (CSBID)

PDB-9e96:
WEEV CBA87 VLP in complex with human PCDH10-EC1
Method: single particle / : Raju S, Diamond MS, Fremont DH, Center for Structural Biology of Infectious Diseases (CSBID)

PDB-9e9y:
WEEV McMillan VLP in complex with VLDLR LA(1-2)
Method: single particle / : Raju S, Diamond MS, Fremont DH, Center for Structural Biology of Infectious Diseases (CSBID)

PDB-9e9z:
SINV-WEEV Fleming in complex with VLDLR LA(1-2)
Method: single particle / : Raju S, Diamond MS, Fremont DH, Center for Structural Biology of Infectious Diseases (CSBID)

PDB-9eau:
RRV DKTA VLP in complex with VLDLR-LBD-Fc
Method: single particle / : Raju S, Diamond MS, Fremont DH, Center for Structural Biology of Infectious Diseases (CSBID)

EMDB-44190:
Cryo-EM of 2NapIF tube, 10 eq. KCl
Method: helical / : Sonani RR, Bianco S, Adams DJ, Egelman EH

EMDB-44195:
Cryo-EM of 2NapIF tube, 5 eq. KCl
Method: helical / : Sonani RR, Bianco S, Adams DJ, Egelman EH

EMDB-44198:
Cryo-EM of 2NapIF tube, 4 eq. NaBr
Method: helical / : Sonani RR, Bianco S, Adams DJ, Egelman EH

EMDB-50027:
Cryo-EM structure of the E. coli BrxX methyltransferase in complex with DNA
Method: single particle / : Adams MC, Ghilarov D

EMDB-50028:
Focused map for NTD and MTD domains of the phage immunity methyltransferase protein BrxX.
Method: single particle / : Adams MC, Ghilarov D

EMDB-50029:
Consensus map for the phage immunity methyltransferase protein BrxX
Method: single particle / : Adams MC, Ghilarov D

EMDB-50032:
Cryo-EM structure of the E. coli BrxX methyltransferase in complex with Ocr
Method: single particle / : Adams MC, Ghilarov D

EMDB-50038:
Cryo-EM structure of the Apo E. coli BrxX methyltransferase
Method: single particle / : Adams MC, Ghilarov D

PDB-9ewz:
Cryo-EM structure of the E. coli BrxX methyltransferase in complex with DNA
Method: single particle / : Adams MC, Ghilarov D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more