Author results

5GNE
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CRYSTAL STRUCTURE OF LAPB FROM LEGIONELLA PNEUMOPHILA
Descriptor:Leucine aminopeptidase, ZINC ION, SULFATE ION
Authors:Zhang, N., Ge, H.
Deposit date:2016-07-20
Release date:2017-08-30
Last modified:2018-10-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure and Biochemical Characterization of an Aminopeptidase LapB from Legionella pneumophila.
J. Agric. Food Chem., 65, 2017
1JJP
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A(GGGG) PENTAD-CONTAINING DIMERIC DNA QUADRUPLEX INVOLVING STACKED G(ANTI)G(ANTI)G(ANTI)G(SYN) TETRADS
Descriptor:5'-D(*GP*GP*GP*AP*GP*GP*TP*TP*TP*GP*GP*GP*AP*T)-3'
Authors:Zhang, N., Gorin, A., Majumdar, A., Kettani, A., Chernichenko, N., Skripkin, E., Patel, D.J.
Deposit date:2001-07-09
Release date:2001-09-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:V-shaped scaffold: a new architectural motif identified in an A x (G x G x G x G) pentad-containing dimeric DNA quadruplex involving stacked G(anti) x G(anti) x G(anti) x G(syn) tetrads.
J.Mol.Biol., 311, 2001
1JVC
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DIMERIC DNA QUADRUPLEX CONTAINING MAJOR GROOVE-ALIGNED A.T.A.T AND G.C.G.C TETRADS STABILIZED BY INTER-SUBUNIT WATSON-CRICK A:T AND G:C PAIRS
Descriptor:5'-D(*GP*AP*GP*CP*AP*GP*GP*T)-3'
Authors:Zhang, N., Gorin, A., Majumdar, A., Kettani, A., Chernichenko, N., Skripkin, E., Patel, D.J.
Deposit date:2001-08-29
Release date:2001-10-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Dimeric DNA quadruplex containing major groove-aligned A-T-A-T and G-C-G-C tetrads stabilized by inter-subunit Watson-Crick A-T and G-C pairs.
J.Mol.Biol., 312, 2001
4V11
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STRUCTURE OF SYNAPTOTAGMIN-1 WITH SV2A PEPTIDE PHOSPHORYLATED AT THR84
Descriptor:SYNAPTOTAGMIN-1, SYNAPTIC VESICLE GLYCOPROTEIN 2A, CALCIUM ION, ...
Authors:Zhang, N., Gordon, S.L., Fritsch, M.J., Esoof, N., Campbell, D., Gourlay, R., Velupillai, S., Macartney, T., Peggie, M., vanAalten, D.M.F., Cousin, M.A., Alessi, D.R.
Deposit date:2014-09-22
Release date:2015-02-25
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Phosphorylation of Synaptic Vesicle Protein 2A at Thr84 by Casein Kinase 1 Family Kinases Controls the Specific Retrieval of Synaptotagmin-1.
J.Neurosci., 35, 2015
1S8K
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SOLUTION STRUCTURE OF BMKK4, A NOVEL POTASSIUM CHANNEL BLOCKER FROM SCORPION BUTHUS MARTENSII KARSCH, 25 STRUCTURES
Descriptor:Toxin BmKK4
Authors:Zhang, N., Chen, X., Li, M., Cao, C., Wang, Y., Hu, G., Wu, H.
Deposit date:2004-02-02
Release date:2005-02-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of BmKK4, the first member of subfamily alpha-KTx 17 of scorpion toxins
Biochemistry, 43, 2004
1Y9H
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METHYLATION OF CYTOSINE AT C5 IN A CPG SEQUENCE CONTEXT CAUSES A CONFORMATIONAL SWITCH OF A BENZO[A]PYRENE DIOL EPOXIDE-N2-GUANINE ADDUCT IN DNA FROM A MINOR GROOVE ALIGNMENT TO INTERCALATION WITH BASE DISPLACEMENT
Descriptor:5'-D(*CP*CP*AP*TP*(5CM)P*(BPG)P*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*CP*GP*AP*TP*GP*G)-3', 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE
Authors:Zhang, N., Lin, C., Huang, X., Kolbanovskiy, A., Hingerty, B.E., Amin, S., Broyde, S., Geacintov, N.E., Patel, D.J.
Deposit date:2004-12-15
Release date:2005-03-22
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement.
J.Mol.Biol., 346, 2005
2AQY
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(3+1) ASSEMBLY OF THREE HUMAN TELOMERIC DNA REPEATS INTO AN ASYMMETRICAL DIMERIC G-QUADRUPLEX
Descriptor:5'-D(*GP*(OIP)P*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3', 5'-D(*TP*AP*GP*GP*GP*(DU))-3'
Authors:Zhang, N., Phan, A.T., Patel, D.J.
Deposit date:2005-08-18
Release date:2006-03-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:(3 + 1) Assembly of three human telomeric repeats into an asymmetric dimeric G-quadruplex
J.Am.Chem.Soc., 127, 2005
2KDE
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NMR STRUCTURE OF MAJOR S5A (196-306):K48 LINKED DIUBIQUITIN SPECIES
Descriptor:26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
Authors:Zhang, N., Wang, Q., Ehlinger, A., Randles, L., Lary, J.W., Kang, Y., Haririnia, A., Cole, J.L., Fushman, D., Walters, K.J.
Deposit date:2009-01-06
Release date:2009-09-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
2KDF
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NMR STRUCTURE OF MINOR S5A (196-306):K48 LINKED DIUBIQUITIN SPECIES
Descriptor:26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
Authors:Zhang, N., Wang, Q., Ehlinger, A., Randles, L., Lary, J.W., Kang, Y., Haririnia, A., Cole, J.L., Fushman, D., Walters, K.J.
Deposit date:2009-01-06
Release date:2009-09-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
2OEY
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SOLUTION STRUCTURE OF A DESIGNED SPIROCYCLIC HELICAL LIGAND BINDING AT A TWO-BASE BULGE SITE IN DNA
Descriptor:DNA (25-MER), (1R,3A'S,10'S,10A'R)-7-METHOXY-2-OXO-10',10A'-DIHYDRO-2H,3A'H-SPIRO[NAPHTHALENE-1,3'-PENTALENO[1,2-B]NAPHTHALEN]-10'-YL 2,6-DIDEOXY-2-(METHYLAMINO)-ALPHA-D-GALACTOPYRANOSIDE
Authors:Zhang, N., Lin, Y., Xiao, Z., Jones, G.B., Goldberg, I.H.
Deposit date:2007-01-01
Release date:2007-04-10
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution Structure of a Designed Spirocyclic Helical Ligand Binding at a Two-Base Bulge Site in DNA.
Biochemistry, 46, 2007
3QQ3
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CRYSTAL STRUCTURE OF SWINE MAJOR HISTOCOMPATIBILITY COMPLEX CLASS I SLA-1 0401 AND IDENTIFICATION OF 2009 PANDEMIC SWINE-ORIGIN INFLUENZA A H1N1 VIRUS CYTOTOXIC T LYMPHOCYTE EPITOPE PEPTIDES
Descriptor:MHC class I antigen, Beta-2-microglobulin, 9-mer peptide from Neuraminidase
Authors:Zhang, N., Qi, J., Gao, F., Pan, X., Chen, R., Li, Q., Chen, Z., Li, X., Xia, C., Gao, G.F.
Deposit date:2011-02-15
Release date:2011-12-28
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides.
J.Virol., 85, 2011
3QQ4
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CRYSTAL STRUCTURE OF SWINE MAJOR HISTOCOMPATIBILITY COMPLEX CLASS I SLA-1 0401 AND IDENTIFICATION OF 2009 PANDEMIC SWINE-ORIGIN INFLUENZA A H1N1 VIRUS CYTOTOXIC T LYMPHOCYTE EPITOPE PEPTIDES
Descriptor:MHC class I antigen, Beta-2-microglobulin, VP35
Authors:Zhang, N., Qi, J., Gao, F., Pan, X., Chen, R., Li, Q., Chen, Z., Li, X., Xia, C., Gao, G.F.
Deposit date:2011-02-15
Release date:2011-12-28
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides.
J.Virol., 85, 2011
3U82
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BINDING OF HERPES SIMPLEX VIRUS GLYCOPROTEIN D TO NECTIN-1 EXPLOITS HOST CELL ADHESION
Descriptor:Envelope glycoprotein D, Poliovirus receptor-related protein 1
Authors:Zhang, N., Yan, J., Lu, G., Guo, Z., Fan, Z., Wang, J., Shi, Y., Qi, J., Gao, G.F.
Deposit date:2011-10-15
Release date:2012-03-21
Method:X-RAY DIFFRACTION (3.164 Å)
Cite:Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion.
Nat Commun, 2, 2011
3U83
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CRYSTAL STRUCTURE OF NECTIN-1
Descriptor:Poliovirus receptor-related protein 1, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE
Authors:Zhang, N., Yan, J., Lu, G., Guo, Z., Fan, Z., Wang, J., Shi, Y., Qi, J., Gao, G.F.
Deposit date:2011-10-15
Release date:2012-03-21
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion.
Nat Commun, 2, 2011
5ESW
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CRYSTAL STRUCTURE OF APO HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE FROM LEGIONELLA PNEUMOPHILA
Descriptor:Purine/pyrimidine phosphoribosyltransferase, PHOSPHATE ION
Authors:Zhang, N., Gong, X., Lu, M., Chen, X., Qin, X., Ge, H.
Deposit date:2015-11-17
Release date:2016-03-30
Last modified:2016-05-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of Apo and GMP bound hypoxanthine-guanine phosphoribosyltransferase from Legionella pneumophila and the implications in gouty arthritis
J.Struct.Biol., 194, 2016
5ESX
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CRYSTAL STRUCTURE OF HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE COMPLEXED WITH GMP FROM LEGIONELLA PNEUMOPHILA
Descriptor:Purine/pyrimidine phosphoribosyltransferase, GUANOSINE-5'-MONOPHOSPHATE
Authors:Zhang, N., Gong, X., Lu, M., Chen, X., Qin, X., Ge, H.
Deposit date:2015-11-17
Release date:2016-03-30
Last modified:2016-05-18
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal structures of Apo and GMP bound hypoxanthine-guanine phosphoribosyltransferase from Legionella pneumophila and the implications in gouty arthritis
J.Struct.Biol., 194, 2016
5H6X
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THE CRYSTAL STRUCTURE OF RPOS FRAGMENT INCLUDING A PARTIAL REGION 1.2 AND REGION 2 FROM INTRACELLULAR PATHOGEN LEGIONELLA PNEUMOPHILA
Descriptor:RNA polymerase sigma factor RpoS, SODIUM ION, GLYCEROL
Authors:Zhang, N., Chen, X., Gong, X., Ge, H.
Deposit date:2016-11-15
Release date:2017-11-22
Last modified:2018-12-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-Resolution Crystal Structure of RpoS Fragment including a Partial Region 1.2 and Region 2 from the Intracellular Pathogen Legionella pneumophila
Crystals, 8, 2018
1PVZ
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SOLUTION STRUCTURE OF BMP07, A NOVEL POTASSIUM CHANNEL BLOCKER FROM SCORPION BUTHUS MARTENSI KARSCH, 15 STRUCTURES
Descriptor:K+ toxin-like peptide
Authors:Wu, H., Zhang, N., Wang, Y., Zhang, Q., Ou, L., Li, M., Hu, G.
Deposit date:2003-06-29
Release date:2004-05-18
Last modified:2018-06-20
Method:SOLUTION NMR
Cite:Solution structure of BmKK2, a new potassium channel blocker from the venom of chinese scorpion Buthus martensi Karsch
PROTEINS, 55, 2004
5NNO
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STRUCTURE OF TBALDH3 COMPLEXED WITH NAD AND AN3057 ALDEHYDE
Descriptor:Aldehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, 4-[(1-oxidanyl-3~{H}-2,1-benzoxaborol-5-yl)oxy]benzaldehyde
Authors:Zoltner, M., Zhang, N., Horn, D., Field, M.C.
Deposit date:2017-04-10
Release date:2017-04-19
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Host-parasite co-metabolic activation of antitrypanosomal aminomethyl-benzoxaboroles.
PLoS Pathog., 14, 2018
5HKW
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CRYSTAL STRUCTURE OF APO C-CBL TKBD REFINED TO 2.25 A RESOLUTION
Descriptor:E3 ubiquitin-protein ligase CBL, SODIUM ION
Authors:Lovell, S., Battaile, K.P., Mehzabeen, N., Zhang, N., Cooper, A., Gao, P., Perez, R.P.
Deposit date:2016-01-14
Release date:2017-01-18
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Apo c-Cbl TKBD Refined to 2.25 A Resolution
To be published
5HKX
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CRYSTAL STRUCTURE OF C-CBL TKBD-RING DOMAINS (Y371E MUTANT) REFINED TO 1.85 A RESOLUTION
Descriptor:E3 ubiquitin-protein ligase CBL, 1,2-ETHANEDIOL, ZINC ION, ...
Authors:Lovell, S., Battaile, K.P., Mehzabeen, N., Zhang, N., Cooper, A., Gao, P., Perez, R.P.
Deposit date:2016-01-14
Release date:2017-01-18
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of c-Cbl TKBD-RING domains (Y371E mutant) Refined to 1.85 A Resolution
To be published
5HKY
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CRYSTAL STRUCTURE OF C-CBL TKBD DOMAIN IN COMPLEX WITH SPRY2 PEPTIDE (36-60, PY55) REFINED TO 1.8A RESOLUTION (P6 FORM)
Descriptor:E3 ubiquitin-protein ligase CBL, Protein sprouty homolog 2, CHLORIDE ION, ...
Authors:Lovell, S., Battaile, K.P., Mehzabeen, N., Zhang, N., Cooper, A., Gao, P., Perez, R.P.
Deposit date:2016-01-14
Release date:2017-01-18
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of c-Cbl TKBD domain in complex with SPRY2 peptide (36-60, pY55) Refined to 1.8A Resolution (P6 form)
To be published
5HKZ
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CRYSTAL STRUCTURE OF C-CBL TKBD IN COMPLEX WITH SPRY2 PEPTIDE (36-60, PY55) REFINED TO 1.8 A RESOLUTION (P21 FORM)
Descriptor:E3 ubiquitin-protein ligase CBL, Protein sprouty homolog 2, SODIUM ION
Authors:Lovell, S., Battaile, K.P., Mehzabeen, N., Zhang, N., Cooper, A., Gao, P., Perez, R.P.
Deposit date:2016-01-14
Release date:2017-01-18
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of c-Cbl TKBD in complex with SPRY2 peptide (36-60, pY55) Refined to 1.8 A Resolution (P21 form)
To be published
5HL0
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CRYSTAL STRUCTURE OF C-CBL TKBD IN COMPLEX WITH SPRY2 PEPTIDE (54-60, PY55) REFINED TO 2.2A RESOLUTION
Descriptor:E3 ubiquitin-protein ligase CBL, Sprouty 2 (SPRY2), SODIUM ION
Authors:Lovell, S., Battaile, K.P., Mehzabeen, N., Zhang, N., Cooper, A., Gao, P., Perez, R.P.
Deposit date:2016-01-14
Release date:2017-01-18
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of c-Cbl TKBD in complex with SPRY2 peptide (54-60, pY55) Refined to 2.2A Resolution
To Be Published
2Z4D
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NMR STRUCTURES OF YEAST PROTEASOME COMPONENT RPN13
Descriptor:26S proteasome regulatory subunit RPN13
Authors:Zhang, N., Walters, K.J.
Deposit date:2007-06-15
Release date:2008-05-20
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Proteasome subunit Rpn13 is a novel ubiquitin receptor.
Nature, 453, 2008