3QQ3

Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides

Summary for 3QQ3

Related1Q94 3QQ4
DescriptorMHC class I antigen, Beta-2-microglobulin, 9-mer peptide from Neuraminidase, ... (4 entities in total)
Functional Keywordsswine mhc class 1, sla-1*0401, epitope of influenza virus, immune system
Biological sourceSus scrofa (pigs)
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Cellular locationSecreted (By similarity) Q07717
Total number of polymer chains6
Total molecular weight88882.52
Authors
Zhang, N.,Qi, J.,Gao, F.,Pan, X.,Chen, R.,Li, Q.,Chen, Z.,Li, X.,Xia, C.,Gao, G.F. (deposition date: 2011-02-15, release date: 2011-12-28)
Primary citation
Zhang, N.,Qi, J.,Feng, S.,Gao, F.,Liu, J.,Pan, X.,Chen, R.,Li, Q.,Chen, Z.,Li, X.,Xia, C.,Gao, G.F.
Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides.
J.Virol., 85:11709-11724, 2011
PubMed: 21900158 (PDB entries with the same primary citation)
DOI: 10.1128/JVI.05040-11
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.59 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.1971305.5%2.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

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More Biological unit images

Molmil generated image of 3qq3
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Molmil generated image of 3qq3
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Molmil generated image of 3qq3
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(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (3qq3.pdb1.gz [68.96 KB])
Coordinate files for Biological unit (3qq3.pdb2.gz [68.34 KB])