3QQ3

Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides

Functional Information from GO Data

Chain	GOid	namespace	contents
B	0002376	biological_process	immune system process
B	0002474	biological_process	antigen processing and presentation of peptide antigen via MHC class I
B	0002503	biological_process	peptide antigen assembly with MHC class II protein complex
B	0005576	cellular_component	extracellular region
B	0005765	cellular_component	lysosomal membrane
B	0006955	biological_process	immune response
B	0019886	biological_process	antigen processing and presentation of exogenous peptide antigen via MHC class II
B	0023026	molecular_function	MHC class II protein complex binding
B	0031902	cellular_component	late endosome membrane
B	0042605	molecular_function	peptide antigen binding
B	0042612	cellular_component	MHC class I protein complex
B	0042613	cellular_component	MHC class II protein complex
B	0050778	biological_process	positive regulation of immune response
B	0050870	biological_process	positive regulation of T cell activation
E	0002376	biological_process	immune system process
E	0002474	biological_process	antigen processing and presentation of peptide antigen via MHC class I
E	0002503	biological_process	peptide antigen assembly with MHC class II protein complex
E	0005576	cellular_component	extracellular region
E	0005765	cellular_component	lysosomal membrane
E	0006955	biological_process	immune response
E	0019886	biological_process	antigen processing and presentation of exogenous peptide antigen via MHC class II
E	0023026	molecular_function	MHC class II protein complex binding
E	0031902	cellular_component	late endosome membrane
E	0042605	molecular_function	peptide antigen binding
E	0042612	cellular_component	MHC class I protein complex
E	0042613	cellular_component	MHC class II protein complex
E	0050778	biological_process	positive regulation of immune response
E	0050870	biological_process	positive regulation of T cell activation

Functional Information from PROSITE/UniProt

site_id	PS00290
Number of Residues	7
Details	IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YSCRVKH

Chain	Residue	Details
B	TYR79-HIS85
A	TYR257-HIS263

---