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4LQ6
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CRYSTAL STRUCTURE OF RV3717 REVEALS A NOVEL AMIDASE FROM M. TUBERCULOSIS
Descriptor:N-acetymuramyl-L-alanine amidase-related protein
Authors:Kumar, A., Kumar, S., Kumar, D., Mishra, A., Dewangan, R.P., Shrivastava, P., Ramachandran, S., Taneja, B.
Deposit date:2013-07-17
Release date:2013-12-04
Last modified:2014-01-15
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:The structure of Rv3717 reveals a novel amidase from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 69, 2013
3KJZ
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CRYSTAL STRUCTURE OF NATIVE PEPTIDYL-TRNA HYDROLASE FROM MYCOBACTERIUM SMEGMATIS
Descriptor:Peptidyl-tRNA hydrolase (E.C.3.1.1.29)
Authors:Kumar, A., Singh, N., Yadav, R., Prem Kumar, R., Sharma, S., Arora, A., Singh, T.P.
Deposit date:2009-11-04
Release date:2010-08-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Fully-Folded Native and Partially-Folded Intermediate States of Peptidyl-tRNA Hydrolase from Mycobacterium smegmatis
To be Published
4L69
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RV2372C OF MYCOBACTERIUM TUBERCULOSIS IS RSME LIKE METHYLTRANSFERSE
Descriptor:Ribosomal RNA small subunit methyltransferase E (E.C.2.1.1.193)
Authors:Kumar, A., Taneja, B.
Deposit date:2013-06-12
Release date:2014-03-19
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of Rv2372c identifies an RsmE-like methyltransferase from Mycobacterium tuberculosis
Acta Crystallogr.,Sect.D, 70, 2014
1JYM
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CRYSTALS OF PEPTIDE DEFORMYLASE FROM PLASMODIUM FALCIPARUM WITH TEN SUBUNITS PER ASYMMETRIC UNIT REVEAL CRITICAL CHARACTERISTICS OF THE ACTIVE SITE FOR DRUG DESIGN
Descriptor:peptide deformylase
Authors:Kumar, A., Nguyen, K.T., Srivathsan, S., Ornstein, B., Turley, S., Hirsh, I., Pei, D., Hol, W.G.J.
Deposit date:2001-09-12
Release date:2002-03-13
Last modified:2009-02-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystals of peptide deformylase from Plasmodium falciparum reveal critical characteristics of the active site for drug design.
Structure, 10, 2002
3P2J
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CRYSTAL STRUCTURE OF PEPTIDYL-TRNA HYDROLASE FROM MYCOBACTERIUM SMEGMATIS AT 2.2 A RESOLUTION
Descriptor:Peptidyl-tRNA hydrolase (E.C.3.1.1.29)
Authors:Kumar, A., Singh, A., Yadav, R., Sinha, M., Arora, A., Sharma, S., Singh, T.P.
Deposit date:2010-10-02
Release date:2010-11-17
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal Structure of peptidyl-tRNA hydrolase from Mycobacterium smegmatis at 2.2 A resolution
To be Published
4DHW
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CRYSTAL STRUCTURE OF PEPTIDYL-TRNA HYDROLASE FROM PSEUDOMONAS AERUGINOSA WITH ADIPIC ACID AT 2.4 ANGSTROM RESOLUTION
Descriptor:Peptidyl-tRNA hydrolase (E.C.3.1.1.29)
Authors:Kumar, A., Singh, A., Singh, N., Sinha, M., Sharma, S., Arora, A., Singh, T.P.
Deposit date:2012-01-30
Release date:2012-02-29
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystal structure of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with Adipic acid at 2.4 Angstrom resolution
To be Published
4DJJ
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CRYSTAL STRUCTURE OF THE COMPLEX OF PEPTIDYL-TRNA HYDROLASE FROM PSEUDOMONAS AERUGINOSA WITH PIMELIC ACID AT 2.9 ANGSTROM RESOLUTION
Descriptor:Peptidyl-tRNA hydrolase (E.C.3.1.1.29)
Authors:Kumar, A., Singh, A., Singh, N., Sinha, M., Sharma, S., Arora, A., Singh, T.P.
Deposit date:2012-02-02
Release date:2012-03-07
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Crystal structure of the complex of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with Pimelic acid at 2.9 Angstrom resolution
To be Published
4ERX
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CRYSTAL STRUCTURE OF THE COMPLEX OF PEPTIDYL-TRNA HYDROLASE FROM PSEUDOMONAS AERUGINOSA WITH DIETHYLENE GLYCOL AT 2.5 ANGSTROM RESOLUTION
Descriptor:Peptidyl-tRNA hydrolase (E.C.3.1.1.29)
Authors:Kumar, A., Singh, A., Singh, N., Sinha, M., Sharma, S., Arora, A., Singh, T.P.
Deposit date:2012-04-21
Release date:2012-05-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the complex of peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with diethylene glycol at 2.5 Angstrom resolution
To be Published
2M5R
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SOLUTION STRUCTURE OF HOLO-ACYL CARRIER PROTEIN OF LEISHMANIA MAJOR
Descriptor:Acyl carrier protein
Authors:Kumar, A., Surolia, A., Sundd, M.
Deposit date:2013-03-07
Release date:2014-09-17
Method:SOLUTION NMR
Cite:NMR structures of the apo- and holo- forms of the acyl carrier protein of Leishmania major
To be Published
2N6C
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SOLUTION STRUCTURE FOR QUERCETIN COMPLEXED WITH C-MYC G-QUADRUPLEX DNA
Descriptor:5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*G)-3'/QUERCETIN
Authors:Kumar, A., Tawani, A.
Deposit date:2015-08-18
Release date:2016-09-14
Method:SOLUTION NMR
Cite:Solution structure for quercetin complexed with c-myc G-quadruplex DNA
To be Published
3KK0
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CRYSTAL STRUCTURE OF PARTIALLY FOLDED INTERMEDIATE STATE OF PEPTIDYL-TRNA HYDROLASE FROM MYCOBACTERIUM SMEGMATIS
Descriptor:Peptidyl-tRNA hydrolase (E.C.3.1.1.29)
Authors:Kumar, A., Singh, N., Yadav, R., Sharma, S., Arora, A., Singh, T.P.
Deposit date:2009-11-04
Release date:2010-11-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structures of Fully-Folded Native and Partially-Folded Intermediate States of Peptidyl-tRNA Hydrolase from Mycobacterium smegmatis
To be Published
5C1Z
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PARKIN (UBLR0RBR)
Descriptor:E3 ubiquitin-protein ligase parkin (E.C.6.3.2.-)
Authors:kumar, A., Aguirre, J.D., Condos, T.E.C., Martinez-Torres, R.J., Chaugule, V.K., Toth, R., Sundaramoorthy, R., Mercier, P., Knebel, A., Spratt, D.E., Barber, K.R., Shaw, G.S., Walden, H.
Deposit date:2015-06-15
Release date:2015-07-29
Last modified:2015-10-28
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Disruption of the autoinhibited state primes the E3 ligase parkin for activation and catalysis.
Embo J., 34, 2015
5C23
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PARKIN (S65DUBLR0RBR)
Descriptor:E3 ubiquitin-protein ligase parkin (E.C.6.3.2.-)
Authors:Kumar, A., Aguirre, J.D., Condos, T.E.C., Martinez-Torres, R.J., Chaugule, V.K., Toth, R., Sundaramoorthy, R., Mercier, P., Knebel, A., Spratt, D.E., Barber, K.R., Shaw, G.S., Walden, H.
Deposit date:2015-06-15
Release date:2015-07-29
Last modified:2015-10-28
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Disruption of the autoinhibited state primes the E3 ligase parkin for activation and catalysis.
Embo J., 34, 2015
5N2W
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WT-PARKIN AND PUB COMPLEX
Descriptor:E3 ubiquitin-protein ligase parkin (E.C.2.3.2.-), Polyubiquitin-B
Authors:Kumar, A., Chaugule, V.K., Johnson, C., Toth, R., Sundaramoorthy, R., Knebel, A., Walden, H.
Deposit date:2017-02-08
Release date:2017-04-19
Last modified:2017-05-17
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Parkin-phosphoubiquitin complex reveals cryptic ubiquitin-binding site required for RBR ligase activity.
Nat. Struct. Mol. Biol., 24, 2017
5N38
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S65DPARKIN AND PUB COMPLEX
Descriptor:PARK2 splice variant, E3 ubiquitin-protein ligase parkin (E.C.2.3.2.-), Polyubiquitin-B
Authors:Kumar, A., Chaugule, V.K., Johnson, C., Toth, R., Sundaramoorthy, R., Knebel, A., Walden, H.
Deposit date:2017-02-08
Release date:2017-04-19
Last modified:2017-05-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Parkin-phosphoubiquitin complex reveals cryptic ubiquitin-binding site required for RBR ligase activity.
Nat. Struct. Mol. Biol., 24, 2017
5N74
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MICROTUBULE END BINDING PROTEIN COMPLEX
Descriptor:Microtubule end binding protein
Authors:Kumar, A., Steinmetz, M.
Deposit date:2017-02-18
Release date:2017-06-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Short Linear Sequence Motif LxxPTPh Targets Diverse Proteins to Growing Microtubule Ends.
Structure, 25, 2017
1CEH
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STRUCTURE AND FUNCTION OF THE CATALYTIC SITE MUTANT ASP99ASN OF PHOSPHOLIPASE A2: ABSENCE OF CONSERVED STRUCTURAL WATER
Descriptor:PHOSPHOLIPASE A2 (PLA2) (E.C.3.1.1.4) MUTANT WITH ASP 99 REPLACED BY ASN (D99N)
Authors:Kumar, A., Sekharudu, C., Ramakrishnan, B., Dupureur, C.M., Zhu, H., Tsai, M.-D., Sundaralingam, M.
Deposit date:1994-11-16
Release date:1995-02-07
Last modified:2009-02-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of the catalytic site mutant Asp 99 Asn of phospholipase A2: absence of the conserved structural water.
Protein Sci., 3, 1994
1HXI
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AN UNEXPECTED EXTENDED CONFORMATION FOR THE THIRD TPR MOTIF OF THE PEROXIN PEX5 FROM TRYPANOSOMA BRUCEI
Descriptor:PEROXISOME TARGETING SIGNAL 1 RECEPTOR PEX5
Authors:Kumar, A., Roach, C., Hirsh, I.S., Turley, S., deWalque, S., Michels, P.A.M., Hol, W.G.J.
Deposit date:2001-01-15
Release date:2001-03-21
Last modified:2009-02-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An unexpected extended conformation for the third TPR motif of the peroxin PEX5 from Trypanosoma brucei.
J.Mol.Biol., 307, 2001
1YWV
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CRYSTAL STRUCTURES OF PROTO-ONCOGENE KINASE PIM1: A TARGET OF ABERRANT SOMATIC HYPERMUTATIONS IN DIFFUSE LARGE CELL LYMPHOMA
Descriptor:Proto-oncogene serine/threonine-protein kinase Pim-1 (E.C.2.7.1.37)
Authors:Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
Deposit date:2005-02-18
Release date:2005-04-26
Last modified:2015-06-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma.
J.Mol.Biol., 348, 2005
1YXS
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CRYSTAL STRUCTURE OF KINASE PIM1 WITH P123M MUTATION
Descriptor:Proto-oncogene serine/threonine-protein kinase Pim-1 (E.C.2.7.1.37)
Authors:Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
Deposit date:2005-02-22
Release date:2005-04-26
Last modified:2015-06-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma.
J.Mol.Biol., 348, 2005
1YXT
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CRYSTAL STRUCTURE OF KINASE PIM1 IN COMPLEX WITH AMPPNP
Descriptor:Proto-oncogene serine/threonine-protein kinase Pim-1 (E.C.2.7.1.37)
Authors:Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
Deposit date:2005-02-22
Release date:2005-04-26
Last modified:2015-06-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma.
J.Mol.Biol., 348, 2005
1YXU
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CRYSTAL STRUCTURE OF KINASE PIM1 IN COMPLEX WITH AMP
Descriptor:Proto-oncogene serine/threonine-protein kinase Pim-1 (E.C.2.7.1.37)
Authors:Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
Deposit date:2005-02-22
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal Structures of Proto-oncogene Kinase Pim1: A Target of Aberrant Somatic Hypermutations in Diffuse Large Cell Lymphoma.
J.Mol.Biol., 348, 2005
1YXV
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CRYSTAL STRUCTURE OF KINASE PIM1 IN COMPLEX WITH 3,4-DIHYDROXY-1-METHYLQUINOLIN-2(1H)-ONE
Descriptor:Proto-oncogene serine/threonine-protein kinase Pim-1 (E.C.2.7.1.37)
Authors:Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
Deposit date:2005-02-22
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Proto-oncogene Kinase Pim1: A Target of Aberrant Somatic Hypermutations in Diffuse Large Cell Lymphoma.
J.Mol.Biol., 348, 2005
1YXX
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CRYSTAL STRUCTURE OF KINASE PIM1 IN COMPLEX WITH (3E)-3-[(4-HYDROXYPHENYL)IMINO]-1H-INDOL-2(3H)-ONE
Descriptor:Proto-oncogene serine/threonine-protein kinase Pim-1 (E.C.2.7.1.37)
Authors:Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
Deposit date:2005-02-22
Release date:2005-04-26
Last modified:2015-06-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma.
J.Mol.Biol., 348, 2005
2IQ6
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CRYSTAL STRUCTURE OF THE AMINOPEPTIDASE FROM VIBRIO PROTEOLYTICUS IN COMPLEXATION WITH LEUCYL-LEUCYL-LEUCINE.
Descriptor:Bacterial leucyl aminopeptidase (E.C.3.4.11.10), Leucyl-leucyl-leucine
Authors:Kumar, A., Narayanan, B., Kim, J.-J.P., Bennett, B.
Deposit date:2006-10-13
Release date:2007-08-28
Last modified:2009-02-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Experimental evidence for a metallohydrolase mechanism in which the nucleophile is not delivered by a metal ion: EPR spectrokinetic and structural studies of aminopeptidase from Vibrio proteolyticus
Biochem.J., 403, 2007
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