S65DParkin and pUB complex

Summary for 5N38

DescriptorE3 ubiquitin-protein ligase parkin,E3 ubiquitin-protein ligase parkin, Polyubiquitin-B, DI(HYDROXYETHYL)ETHER, ... (6 entities in total)
Functional Keywordss65dparkin pub complex, splicing, ligase
Biological sourceHomo sapiens (Human)
Cellular locationCytoplasm, cytosol  O60260
Ubiquitin: Cytoplasm  P0CG47
Total number of polymer chains2
Total molecular weight54933.73
Kumar, A.,Chaugule, V.K.,Johnson, C.,Toth, R.,Sundaramoorthy, R.,Knebel, A.,Walden, H. (deposition date: 2017-02-08, release date: 2017-04-19, Last modification date: 2018-02-07)
Primary citation
Kumar, A.,Chaugule, V.K.,Condos, T.E.C.,Barber, K.R.,Johnson, C.,Toth, R.,Sundaramoorthy, R.,Knebel, A.,Shaw, G.S.,Walden, H.
Parkin-phosphoubiquitin complex reveals cryptic ubiquitin-binding site required for RBR ligase activity.
Nat. Struct. Mol. Biol., 24:475-483, 2017
PubMed: 28414322 (PDB entries with the same primary citation)
DOI: 10.1038/nsmb.3400
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2495 0.7% 8.1% 1.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-10-21