Author results

6QGN
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CRYSTAL STRUCTURE OF APT1 BOUND TO 2-BROMOPALMITATE
Descriptor:Acyl-protein thioesterase 1, 2-Bromopalmitic acid
Authors:Marcaida, M.J., Audagnotto, M., Ho, S., Pojer, F., Van der Goot, G., Dal Peraro, M.
Deposit date:2019-01-12
Release date:2020-02-05
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Insights into the molecular mechanism of depalmitoylation by human acyl-protein thioesterases
To Be Published
6QGO
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CRYSTAL STRUCTURE OF APT1 S119A MUTANT BOUND TO PALMITIC ACID.
Descriptor:Acyl-protein thioesterase 1, PALMITIC ACID
Authors:Audagnotto, M., Marcaida, M.J., Ho, S., Pojer, F., Van der Goot, G., Dal Peraro, M.
Deposit date:2019-01-12
Release date:2020-02-05
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Insights into the molecular mechanism of depalmitoylation by human acyl-protein thioesterases
To Be Published
6QGQ
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CRYSTAL STRUCTURE OF APT1 C2S MUTANT BOUND TO PALMITIC ACID.
Descriptor:Acyl-protein thioesterase 1, GLYCEROL, PALMITIC ACID
Authors:Audagnotto, M., Marcaida, M.J., Ho, S., Pojer, F., Van der Goot, G., Dal Peraro, M.
Deposit date:2019-01-12
Release date:2020-02-05
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Insights into the molecular mechanism of depalmitoylation by human acyl-protein thioesterases
To Be Published
6QGS
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CRYSTAL STRUCTURE OF APT1 BOUND TO PALMITIC ACID.
Descriptor:Acyl-protein thioesterase 1, PALMITIC ACID, CHLORIDE ION
Authors:Audagnotto, M., Marcaida, M.J., Ho, S., Pojer, F., Van der Goot, G., Dal Peraro, M.
Deposit date:2019-01-12
Release date:2020-02-05
Method:X-RAY DIFFRACTION (2.755 Å)
Cite:Insights into the molecular mechanism of depalmitoylation by human acyl-protein thioesterases
To Be Published
2HZ8
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QM/MM STRUCTURE REFINED FROM NMR-STRUCTURE OF A SINGLE CHAIN DIIRON PROTEIN
Descriptor:De novo designed diiron protein, ZINC ION
Authors:Calhoun, J.R., Liu, W., Spiegel, K., Dal Peraro, M., Klein, M.L., Wand, A.J., DeGrado, W.F.
Deposit date:2006-08-08
Release date:2007-07-17
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution NMR structure of a designed metalloprotein and complementary molecular dynamics refinement.
Structure, 16, 2008
3C0M
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CRYSTAL STRUCTURE OF THE PROAEROLYSIN MUTANT Y221G
Descriptor:Aerolysin
Authors:Pernot, L., Schiltz, M., Thurnheer, S., Burr, S.E., van der Goot, G.
Deposit date:2008-01-21
Release date:2008-02-12
Last modified:2013-10-02
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Molecular assembly of the aerolysin pore reveals a swirling membrane-insertion mechanism.
Nat.Chem.Biol., 9, 2013
3C0N
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CRYSTAL STRUCTURE OF THE PROAEROLYSIN MUTANT Y221G AT 2.2 A
Descriptor:Aerolysin
Authors:Pernot, L., Schiltz, M., Thurnheer, S., Burr, S.E., van der Goot, G.
Deposit date:2008-01-21
Release date:2008-02-12
Last modified:2013-10-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular assembly of the aerolysin pore reveals a swirling membrane-insertion mechanism.
Nat.Chem.Biol., 9, 2013
3C0O
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CRYSTAL STRUCTURE OF THE PROAEROLYSIN MUTANT Y221G COMPLEXED WITH MANNOSE-6-PHOSPHATE
Descriptor:Aerolysin, ACETATE ION, ALPHA-D-MANNOSE-6-PHOSPHATE
Authors:Pernot, L., Schiltz, M., Thurnheer, S., Burr, S.E., van der Goot, G.
Deposit date:2008-01-21
Release date:2008-02-12
Last modified:2013-10-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular assembly of the aerolysin pore reveals a swirling membrane-insertion mechanism.
Nat.Chem.Biol., 9, 2013
3G4N
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CRYSTAL STRUCTURE OF THE ACTIVATED AEROLYSIN MUTANT H132D
Descriptor:Aerolysin
Authors:Pernot, L., Schiltz, M., van der Goot, G.
Deposit date:2009-02-04
Release date:2010-02-09
Last modified:2011-08-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dual chaperone role of the C-terminal propeptide in folding and oligomerization of the pore-forming toxin aerolysin.
Plos Pathog., 7, 2011
3G4O
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CRYSTAL STRUCTURE OF THE ACTIVATED AEROLYSIN MUTANT H132N
Descriptor:Aerolysin
Authors:Pernot, L., Schiltz, M., van der Goot, G.
Deposit date:2009-02-04
Release date:2010-02-09
Last modified:2011-08-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dual chaperone role of the C-terminal propeptide in folding and oligomerization of the pore-forming toxin aerolysin.
Plos Pathog., 7, 2011
4ALZ
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THE YERSINIA T3SS BASAL BODY COMPONENT YSCD REVEALS A DIFFERENT STRUCTURAL PERIPLASMATIC DOMAIN ORGANIZATION TO KNOWN HOMOLOGUE PRGH
Descriptor:YOP PROTEINS TRANSLOCATION PROTEIN D, PHOSPHATE ION, GLYCEROL
Authors:Schmelz, S., Wisand, U., Stenta, M., Muenich, S., Widow, U., Cornelis, G.R., Heinz, D.W.
Deposit date:2012-03-06
Release date:2013-04-24
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:In Situ Structural Analysis of the Yersinia Enterocolitica Injectisome.
Elife, 2, 2013
6HX0
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CELL WALL BINDING DOMAIN OF ENDOLYSIN FROM LISTERIA PHAGE A500.
Descriptor:L-alanyl-D-glutamate peptidase
Authors:Dunne, M., Taylor, N.M.I., Shen, Y., Loessner, M.J., Leiman, P.G.
Deposit date:2018-10-15
Release date:2019-10-30
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Molecular recognition of Listeria wall teichoic acids by bacteriophage-encoded SH3-like domains
To Be Published
5I35
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STRUCTURE OF THE HUMAN MITOCHONDRIAL KINASE COQ8A R611K WITH AMPPNP (CEREBELLAR ATAXIA AND UBIQUINONE DEFICIENCY THROUGH LOSS OF UNORTHODOX KINASE ACTIVITY)
Descriptor:Atypical kinase ADCK3, mitochondrial, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Bingman, C.A., Stefely, J.A., Pagliarini, D.J., Mitochondrial Protein Partnership (MPP)
Deposit date:2016-02-09
Release date:2016-08-17
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cerebellar Ataxia and Coenzyme Q Deficiency through Loss of Unorthodox Kinase Activity.
Mol.Cell, 63, 2016
6HTF
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CRYSTAL STRUCTURE OF HUMAN BTK SH2 DOMAIN BOUND TO RF10 REPEBODY
Descriptor:Tyrosine-protein kinase BTK, rF10 repebody
Authors:Duarte, D.P., Pojer, F., Hantschel, O.
Deposit date:2018-10-04
Release date:2020-05-20
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Btk SH2-kinase interface is critical for allosteric kinase activation and its targeting inhibits B-cell neoplasms.
Nat Commun, 11, 2020
5JZH
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CRYO-EM STRUCTURE OF AEROLYSIN PREPORE
Descriptor:Aerolysin
Authors:Iacovache, I., Zuber, B.
Deposit date:2016-05-16
Release date:2016-07-13
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of aerolysin variants reveals a novel protein fold and the pore-formation process.
Nat Commun, 7, 2016
5JZT
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CRYO-EM STRUCTURE OF AEROLYSIN PORE IN LMNG MICELLE
Descriptor:Aerolysin
Authors:Iacovache, I., Zuber, B.
Deposit date:2016-05-17
Release date:2016-07-13
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Cryo-EM structure of aerolysin variants reveals a novel protein fold and the pore-formation process.
Nat Commun, 7, 2016
5JZW
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CRYO-EM STRUCTURES OF AEROLYSIN POST-PREPORE AND QUASIPORE
Descriptor:Aerolysin
Authors:Iacovache, I., Zuber, B.
Deposit date:2016-05-17
Release date:2016-07-13
Last modified:2018-11-21
Method:ELECTRON MICROSCOPY (4.46 Å)
Cite:Cryo-EM structure of aerolysin variants reveals a novel protein fold and the pore-formation process.
Nat Commun, 7, 2016
6AWL
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CRYSTAL STRUCTURE OF HUMAN COQ9
Descriptor:Ubiquinone biosynthesis protein COQ9, mitochondrial, DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, ...
Authors:Bingman, C.A., Lohman, D.C., Smith, R.W., Pagliarini, D.J., Mitochondrial Protein Partnership (MPP)
Deposit date:2017-09-05
Release date:2019-02-06
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:An Isoprene Lipid-Binding Protein Promotes Eukaryotic Coenzyme Q Biosynthesis.
Mol. Cell, 73, 2019
6DEW
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STRUCTURE OF HUMAN COQ9 PROTEIN WITH BOUND ISOPRENE.
Descriptor:Ubiquinone biosynthesis protein COQ9, mitochondrial, SULFATE ION, ...
Authors:Bingman, C.A., Lohman, D.C., Smith, R.W., Pagliarini, D.J.
Deposit date:2018-05-13
Release date:2019-02-06
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:An Isoprene Lipid-Binding Protein Promotes Eukaryotic Coenzyme Q Biosynthesis.
Mol.Cell, 73, 2019