Author results

3KHL
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DPO4 POST-EXTENSION TERNARY COMPLEX WITH MISINSERTED A OPPOSITE THE 2-AMINOFLUORENE-GUANINE [AF]G LESION
Descriptor:DNA polymerase IV, 5'-D(*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*AP*(DDG))-3', 5'-D(*CP*C*TP*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', ...
Authors:Rechkoblit, O., Malinina, L., Patel, D.J.
Deposit date:2009-10-30
Release date:2010-02-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of error-free and semitargeted mutagenic bypass of an aromatic amine lesion by Y-family polymerase Dpo4.
Nat.Struct.Mol.Biol., 17, 2010
3KHR
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DPO4 POST-EXTENSION TERNARY COMPLEX WITH THE CORRECT C OPPOSITE THE 2-AMINOFLUORENE-GUANINE [AF]G LESION
Descriptor:DNA polymerase IV, 5'-D(*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*CP*(DDG))-3', 5'-D(*CP*C*TP*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', ...
Authors:Rechkoblit, O., Malinina, L., Patel, D.J.
Deposit date:2009-10-30
Release date:2010-02-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Mechanism of error-free and semitargeted mutagenic bypass of an aromatic amine lesion by Y-family polymerase Dpo4.
Nat.Struct.Mol.Biol., 17, 2010
3KV0
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CRYSTAL STRUCTURE OF HET-C2: A FUNGAL GLYCOLIPID TRANSFER PROTEIN (GLTP)
Descriptor:HET-C2
Authors:Simanshu, D.K., Kenoth, R., Brown, R.E., Patel, D.J.
Deposit date:2009-11-28
Release date:2010-02-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural determination and tryptophan fluorescence of heterokaryon incompatibility C2 protein (HET-C2), a fungal glycolipid transfer protein (GLTP), provide novel insights into glycolipid specificity and membrane interaction by the GLTP fold.
J.Biol.Chem., 285, 2010
3LD7
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CRYSTAL STRUCTURE OF THE LIN0431 PROTEIN FROM LISTERIA INNOCUA, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET LKR112
Descriptor:Lin0431 protein
Authors:Vorobiev, S., Chen, Y., Lee, D., Patel, D.J., Ciccosanti, C., Sahdev, S., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-01-12
Release date:2010-01-26
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.547 Å)
Cite:Crystal structure of the Lin0431 protein from Listeria innocua
To be Published
3LMA
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CRYSTAL STRUCTURE OF THE STAGE V SPORULATION PROTEIN AD (SPOVAD) FROM BACILLUS LICHENIFORMIS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET BIR6.
Descriptor:Stage V sporulation protein AD (SpoVAD)
Authors:Vorobiev, S., Ashok, S., Seetharaman, J., Belote, R.L., Ciccosanti, C., Patel, D.J., Janjua, H., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-01-29
Release date:2010-02-09
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.993 Å)
Cite:Crystal structure of the stage V sporulation protein AD (SpoVAD) from Bacillus licheniformis.
To be Published
3LML
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CRYSTAL STRUCTURE OF THE SHEATH TAIL PROTEIN LIN1278 FROM LISTERIA INNOCUA, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET LKR115
Descriptor:Lin1278 protein
Authors:Forouhar, F., Neely, H., Seetharaman, J., Mao, M., Xiao, R., Patel, D.J., Ciccosanti, C., Wang, H., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-01-31
Release date:2010-03-09
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Northeast Structural Genomics Consortium Target LkR115
To be Published
3LPY
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CRYSTAL STRUCTURE OF THE RRM DOMAIN OF CYP33
Descriptor:Peptidyl-prolyl cis-trans isomerase E, SULFATE ION, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
Authors:Wang, Z., Patel, D.J.
Deposit date:2010-02-07
Release date:2010-07-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
3LQH
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CRYSTAL STRUCTURE OF MLL1 PHD3-BROMO IN THE FREE FORM
Descriptor:Histone-lysine N-methyltransferase MLL, ZINC ION
Authors:Wang, Z., Patel, D.J.
Deposit date:2010-02-09
Release date:2010-07-07
Last modified:2017-07-26
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
3LQI
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CRYSTAL STRUCTURE OF MLL1 PHD3-BROMO COMPLEXED WITH H3(1-9)K4ME2 PEPTIDE
Descriptor:MLL1 PHD3-Bromo, Histone H3, ZINC ION
Authors:Wang, Z., Patel, D.J.
Deposit date:2010-02-09
Release date:2010-07-07
Last modified:2017-07-26
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
3LQJ
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CRYSTAL STRUCTURE OF MLL1 PHD3-BROMO COMPLEXED WITH H3(1-9)K4ME3 PEPTIDE
Descriptor:MLL1 PHD3-Bromo, Histone H3, ZINC ION
Authors:Wang, Z., Patel, D.J.
Deposit date:2010-02-09
Release date:2010-07-07
Last modified:2017-07-26
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
3NMR
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CRYSTAL STRUCTURE OF CUGBP1 RRM1/2-RNA COMPLEX
Descriptor:CUGBP Elav-like family member 1, RNA (5'-R(*GP*UP*UP*GP*UP*UP*UP*UP*GP*UP*UP*U)-3')
Authors:Teplova, M., Song, J., Gaw, H., Teplov, A., Patel, D.J.
Deposit date:2010-06-22
Release date:2010-10-27
Last modified:2014-10-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
3NNA
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CRYSTAL STRUCTURE OF CUGBP1 RRM1/2-RNA COMPLEX
Descriptor:CUGBP Elav-like family member 1, RNA (5'-R(*GP*UP*UP*GP*UP*UP*UP*UP*GP*UP*UP*U)-3')
Authors:Teplova, M., Song, J., Gaw, H., Teplov, A., Patel, D.J.
Deposit date:2010-06-23
Release date:2010-10-27
Last modified:2014-10-08
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
3NNC
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CRYSTAL STRUCTURE OF CUGBP1 RRM1/2-RNA COMPLEX
Descriptor:CUGBP Elav-like family member 1, RNA (5'-R(*UP*GP*UP*GP*UP*GP*UP*UP*GP*UP*GP*UP*G)-3')
Authors:Teplova, M., Song, J., Gaw, H., Teplov, A., Patel, D.J.
Deposit date:2010-06-23
Release date:2010-10-27
Last modified:2014-10-08
Method:X-RAY DIFFRACTION (2.2005 Å)
Cite:Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
3NNH
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CRYSTAL STRUCTURE OF THE CUGBP1 RRM1 WITH GUUGUUUUGUUU RNA
Descriptor:CUGBP Elav-like family member 1, RNA (5'-R(*GP*UP*UP*GP*UP*UP*UP*UP*GP*UP*UP*U)-3')
Authors:Teplova, M., Song, J., Gaw, H., Teplov, A., Patel, D.J.
Deposit date:2010-06-23
Release date:2010-10-27
Last modified:2014-10-08
Method:X-RAY DIFFRACTION (2.7501 Å)
Cite:Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
3O33
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CRYSTAL STRUCTURE OF TRIM24 PHD-BROMO IN THE FREE STATE
Descriptor:Transcription intermediary factor 1-alpha, ZINC ION
Authors:Wang, Z., Patel, D.J.
Deposit date:2010-07-23
Release date:2010-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:TRIM24 links a non-canonical histone signature to breast cancer.
Nature, 468, 2010
3O34
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CRYSTAL STRUCTURE OF TRIM24 PHD-BROMO COMPLEXED WITH H3(13-32)K23AC PEPTIDE
Descriptor:Transcription intermediary factor 1-alpha, Histone H3.1, ZINC ION, ...
Authors:Wang, Z., Patel, D.J.
Deposit date:2010-07-23
Release date:2010-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:TRIM24 links a non-canonical histone signature to breast cancer.
Nature, 468, 2010
3O35
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CRYSTAL STRUCTURE OF TRIM24 PHD-BROMO COMPLEXED WITH H3(23-31)K27AC PEPTIDE
Descriptor:Transcription intermediary factor 1-alpha, Histone H3.1, ZINC ION
Authors:Wang, Z., Patel, D.J.
Deposit date:2010-07-23
Release date:2010-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:TRIM24 links a non-canonical histone signature to breast cancer.
Nature, 468, 2010
3O36
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CRYSTAL STRUCTURE OF TRIM24 PHD-BROMO COMPLEXED WITH H4(14-19)K16AC PEPTIDE
Descriptor:Transcription intermediary factor 1-alpha, Histone H4, ZINC ION
Authors:Wang, Z., Patel, D.J.
Deposit date:2010-07-23
Release date:2010-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:TRIM24 links a non-canonical histone signature to breast cancer.
Nature, 468, 2010
3O37
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CRYSTAL STRUCTURE OF TRIM24 PHD-BROMO COMPLEXED WITH H3(1-10)K4 PEPTIDE
Descriptor:Transcription intermediary factor 1-alpha, Histone H3.1, ZINC ION
Authors:Wang, Z., Patel, D.J.
Deposit date:2010-07-23
Release date:2010-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:TRIM24 links a non-canonical histone signature to breast cancer.
Nature, 468, 2010
3O3I
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CRYSTAL STRUCTURE OF HUMAN HIWI1 PAZ DOMAIN (RESIDUES 277-399) IN COMPLEX WITH 14-MER RNA (12-BP + 2-NT OVERHANG) CONTAINING 2'-OH AT ITS 3'-END
Descriptor:Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*U)-3')
Authors:Tian, Y., Simanshu, D.K., Ma, J.-B., Patel, D.J.
Deposit date:2010-07-24
Release date:2011-01-12
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O6E
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CRYSTAL STRUCTURE OF HUMAN HIWI1 PAZ DOMAIN (RESIDUES 277-399) IN COMPLEX WITH 14-MER RNA (12-BP + 2-NT OVERHANG) CONTAINING 2'-OCH3 AT ITS 3'-END
Descriptor:Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*(OMU))-3')
Authors:Tian, Y., Simanshu, D.K., Ma, J.-B., Patel, D.J.
Deposit date:2010-07-28
Release date:2011-01-12
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.904 Å)
Cite:Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O7V
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CRYSTAL STRUCTURE OF HUMAN HIWI1 (V361M) PAZ DOMAIN (RESIDUES 277-399) IN COMPLEX WITH 14-MER RNA (12-BP + 2-NT OVERHANG) CONTAINING 2'-OCH3 AT ITS 3'-END
Descriptor:Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*(OMU))-3')
Authors:Tian, Y., Simanshu, D.K., Ma, J.-B., Patel, D.J.
Deposit date:2010-08-01
Release date:2011-01-12
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O7X
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CRYSTAL STRUCTURE OF HUMAN HILI PAZ DOMAIN
Descriptor:Piwi-like protein 2
Authors:Tian, Y., Simanshu, D.K., Ma, J.-B., Patel, D.J.
Deposit date:2010-08-01
Release date:2011-01-12
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.9248 Å)
Cite:Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
3OWI
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CRYSTAL STRUCTURE OF THE GLYCINE RIBOSWITCH BOUND TO GLYCINE
Descriptor:Domain II of glycine riboswitch, GLYCINE, MAGNESIUM ION
Authors:Huang, L., Serganov, A., Patel, D.J.
Deposit date:2010-09-19
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.845 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
3OWW
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CRYSTAL STRUCTURE OF THE GLYCINE RIBOSWITCH BOUND TO GLYCINE
Descriptor:domain II of glycine riboswitch, GLYCINE, MAGNESIUM ION
Authors:Huang, L., Serganov, A., Patel, D.J.
Deposit date:2010-09-20
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010