Author results

2CNX
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WDR5 AND HISTONE H3 LYSINE 4 DIMETHYL COMPLEX AT 2.1 ANGSTROM
Descriptor:WD-REPEAT PROTEIN 5, HISTONE H3 DIMETHYL-LYSINE 4
Authors:Ruthenburg, A.J., Wang, W., Graybosch, D.M., Li, H., Allis, C.D., Patel, D.J., Verdine, G.L.
Deposit date:2006-05-25
Release date:2006-07-03
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Histone H3 Recognition and Presentation by the Wdr5 Module of the Mll1 Complex
Nat.Struct.Mol.Biol., 13, 2006
2CO0
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WDR5 AND UNMODIFIED HISTONE H3 COMPLEX AT 2.25 ANGSTROM
Descriptor:WD-REPEAT PROTEIN 5, HISTONE H3 DIMETHYL-LYSINE 4
Authors:Ruthenburg, A.J., Wang, W., Graybosch, D.M., Li, H., Allis, C.D., Patel, D.J., Verdine, G.L.
Deposit date:2006-05-25
Release date:2006-07-03
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Histone H3 Recognition and Presentation by the Wdr5 Module of the Mll1 Complex
Nat.Struct.Mol.Biol., 13, 2006
2CWO
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CRYSTAL STRUCTURE OF RNA SILENCING SUPPRESSOR P21 FROM BEET YELLOWS VIRUS
Descriptor:RNA silencing suppressor
Authors:Ye, K., Patel, D.J.
Deposit date:2005-06-22
Release date:2005-10-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:RNA Silencing Suppressor p21 of Beet Yellows Virus Forms an RNA Binding Octameric Ring Structure
STRUCTURE, 13, 2005
2EUK
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CRYSTAL STRUCTURE OF HUMAN GLYCOLIPID TRANSFER PROTEIN COMPLEXED WITH 24:1 GALACTOSYLCERAMIDE
Descriptor:Glycolipid transfer protein, BETA-D-GALACTOSE, SPHINGOSINE, ...
Authors:Malinina, L., Malakhova, M.L., Kanack, A.T., Abagyan, R., Brown, R.E., Patel, D.J.
Deposit date:2005-10-28
Release date:2006-11-14
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EUM
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CRYSTAL STRUCTURE OF HUMAN GLYCOLIPID TRANSFER PROTEIN COMPLEXED WITH 8:0 LACTOSYLCERAMIDE
Descriptor:Glycolipid transfer protein, BETA-LACTOSE, SPHINGOSINE, ...
Authors:Malinina, L., Malakhova, M.L., Kanack, A.T., Abagyan, R., Brown, R.E., Patel, D.J.
Deposit date:2005-10-28
Release date:2006-11-14
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EVD
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CRYSTAL STRUCTURE OF HUMAN GLYCOLIPID TRANSFER PROTEIN COMPLEXED WITH 12:0 LACTOSYLCERAMIDE
Descriptor:Glycolipid transfer protein, BETA-LACTOSE, SPHINGOSINE, ...
Authors:Malinina, L., Malakhova, M.L., Kanack, A.T., Abagyan, R., Brown, R.E., Patel, D.J.
Deposit date:2005-10-31
Release date:2006-11-14
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EVL
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CRYSTAL STRUCTURE OF HUMAN GLYCOLIPID TRANSFER PROTEIN COMPLEXED WITH 18:2 GALACTOSYLCERAMIDE
Descriptor:Glycolipid transfer protein, BETA-D-GALACTOSE, SPHINGOSINE, ...
Authors:Malinina, L., Malakhova, M.L., Kanack, A.T., Abagyan, R., Brown, R.E., Patel, D.J.
Deposit date:2005-10-31
Release date:2006-11-14
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EVS
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CRYSTAL STRUCTURE OF HUMAN GLYCOLIPID TRANSFER PROTEIN COMPLEXED WITH N-HEXYL-BETA-D-GLUCOSIDE
Descriptor:Glycolipid transfer protein, ALPHA-D-GLUCOSE, HEXANE, ...
Authors:Malinina, L., Malakhova, M.L., Kanack, A.T., Abagyan, R., Brown, R.E., Patel, D.J.
Deposit date:2005-10-31
Release date:2006-11-14
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EVT
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CRYSTAL STRUCTURE OF D48V MUTANT OF HUMAN GLYCOLIPID TRANSFER PROTEIN
Descriptor:Glycolipid transfer protein, HEXANE
Authors:Malinina, L., Malakhova, M.L., Teplov, A., Brown, R.E., Patel, D.J.
Deposit date:2005-10-31
Release date:2005-11-15
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2F6J
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CRYSTAL STRUCTURE OF PHD FINGER-LINKER-BROMODOMAIN FRAGMENT OF HUMAN BPTF IN THE H3(1-15)K4ME3 BOUND STATE
Descriptor:bromodomain PHD finger transcription factor, histone H3, N-terminal, ...
Authors:Li, H., Patel, D.J.
Deposit date:2005-11-29
Release date:2006-07-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2F6N
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CRYSTAL STRUCTURE OF PHD FINGER-LINKER-BROMODOMAIN FRAGMENT OF HUMAN BPTF IN THE FREE FORM
Descriptor:bromodomain PHD finger transcription factor, ZINC ION
Authors:Li, H., Patel, D.J.
Deposit date:2005-11-29
Release date:2006-07-11
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2F8S
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CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA
Descriptor:5'-R(P*AP*GP*AP*CP*AP*GP*CP*AP*UP*AP*UP*AP*UP*GP*CP*UP*GP*UP*CP*UP*UP*U)-3', Argonaute protein
Authors:Yuan, Y.R., Chen, H.Y., Patel, D.J.
Deposit date:2005-12-03
Release date:2006-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Potential Protein-RNA Recognition Event along the RISC-Loading Pathway from the Structure of A. aeolicus Argonaute with Externally Bound siRNA.
Structure, 14, 2006
2F8T
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CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA
Descriptor:26-MER, Argonaute protein
Authors:Yuan, Y.R., Chen, H.Y., Patel, D.J.
Deposit date:2005-12-03
Release date:2006-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A Potential Protein-RNA Recognition Event along the RISC-Loading Pathway from the Structure of A. aeolicus Argonaute with Externally Bound siRNA.
Structure, 14, 2006
2FSA
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CRYSTAL STRUCTURE OF PHD FINGER-LINKER-BROMODOMAIN FRAGMENT OF HUMAN BPTF IN THE H3(1-15)K4ME2 BOUND STATE
Descriptor:bromodomain PHD finger transcription factor, Histone H3(1-15)K4me2 peptide, ZINC ION
Authors:Li, H., Patel, D.J.
Deposit date:2006-01-21
Release date:2006-07-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2FUI
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NMR SOLUTION STRUCTURE OF PHD FINGER FRAGMENT OF HUMAN BPTF IN FREE STATE
Descriptor:bromodomain PHD finger transcription factor
Authors:Ilin, S., Patel, D.J.
Deposit date:2006-01-26
Release date:2006-07-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2FUU
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NMR SOLUTION STRUCTURE OF THE PHD DOMAIN FROM THE HUMAN BPTF IN COMPLEX WITH H3(1-15)K4ME3 PEPTIDE
Descriptor:bromodomain PHD finger transcription factor, Histone H3, ZINC ION
Authors:Ilin, S., Patel, D.J.
Deposit date:2006-01-27
Release date:2006-07-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2GKU
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MONOMERIC HUMAN TELOMERE DNA TETRAPLEX WITH 3+1 STRAND FOLD TOPOLOGY, TWO EDGEWISE LOOPS AND DOUBLE-CHAIN REVERSAL LOOP, NMR, 12 STRUCTURES
Descriptor:Human telomere DNA
Authors:Luu, K.N., Phan, A.T., Kuryavyi, V.V., Lacroix, L., Patel, D.J.
Deposit date:2006-04-03
Release date:2006-08-15
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the human telomere in k(+) solution: an intramolecular (3 + 1) g-quadruplex scaffold.
J.Am.Chem.Soc., 128, 2006
2H68
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HISTONE H3 RECOGNITION AND PRESENTATION BY THE WDR5 MODULE OF THE MLL1 COMPLEX
Descriptor:WD-repeat protein 5
Authors:Ruthenburg, A.J., Wang, W.-K., Graybosch, D.M., Li, H., Allis, C.D., Patel, D.J., Verdine, G.L.
Deposit date:2006-05-30
Release date:2006-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex.
Nat.Struct.Mol.Biol., 13, 2006
2H6K
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HISTONE H3 RECOGNITION AND PRESENTATION BY THE WDR5 MODULE OF THE MLL1 COMPLEX
Descriptor:WD-repeat protein 5, Histone H3 K4-Me 9-residue peptide
Authors:Ruthenburg, A.J., Wang, W.-K., Graybosch, D.M., Li, H., Allis, C.D., Patel, D.J., Verdine, G.L.
Deposit date:2006-05-31
Release date:2006-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex.
Nat.Struct.Mol.Biol., 13, 2006
2H6N
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HISTONE H3 RECOGNITION AND PRESENTATION BY THE WDR5 MODULE OF THE MLL1 COMPLEX
Descriptor:WD-repeat protein 5, Histone H3 K4-Me2 9-residue peptide
Authors:Ruthenburg, A.J., Wang, W.-K., Graybosch, D.M., Li, H., Allis, C.D., Patel, D.J., Verdine, G.L.
Deposit date:2006-05-31
Release date:2006-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex.
Nat.Struct.Mol.Biol., 13, 2006
2H6Q
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HISTONE H3 RECOGNITION AND PRESENTATION BY THE WDR5 MODULE OF THE MLL1 COMPLEX
Descriptor:WD-repeat protein 5, Histone H3 K4-Me3 9-residue peptide
Authors:Ruthenburg, A.J., Wang, W.-K., Graybosch, D.M., Li, H., Allis, C.D., Patel, D.J., Verdine, G.L.
Deposit date:2006-06-01
Release date:2006-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex.
Nat.Struct.Mol.Biol., 13, 2006
2JMI
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NMR SOLUTION STRUCTURE OF PHD FINGER FRAGMENT OF YEAST YNG1 PROTEIN IN FREE STATE
Descriptor:Protein YNG1, ZINC ION
Authors:Ilin, S., Taverna, S.D., Rogers, R.S., Tanny, J.C., Lavender, H., Li, H., Baker, L., Boyle, J., Blair, L.P., Chait, B.T., Patel, D.J., Aitchison, J.D., Tackett, A.J., Allis, C.D.
Deposit date:2006-11-15
Release date:2007-07-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs
Mol.Cell, 24, 2006
2JMJ
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NMR SOLUTION STRUCTURE OF THE PHD DOMAIN FROM THE YEAST YNG1 PROTEIN IN COMPLEX WITH H3(1-9)K4ME3 PEPTIDE
Descriptor:Protein YNG1, Histone H3, ZINC ION
Authors:Ilin, S., Taverna, S.D., Rogers, R.S., Tanny, J.C., Lavender, H., Li, H., Baker, L., Boyle, J., Blair, L.P., Chait, B.T., Patel, D.J., Aitchison, J.D., Tackett, A.J., Allis, C.D.
Deposit date:2006-11-15
Release date:2007-07-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs
Mol.Cell, 24, 2006
2JSK
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MONOMERIC HUMAN TELOMERE DNA TETRAPLEX WITH 3+1 STRAND FOLD TOPOLOGY, TWO EDGEWISE LOOPS AND DOUBLE-CHAIN REVERSAL LOOP, 16 G FORM 1, NMR, 10 STRUCTURES
Descriptor:HUMAN TELOMERE DNA
Authors:Kuryavyi, V.V., Phan, A.T., Luu, K.N., Patel, D.J.
Deposit date:2007-07-07
Release date:2008-07-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution.
Nucleic Acids Res., 35, 2007
2JSL
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MONOMERIC HUMAN TELOMERE DNA TETRAPLEX WITH 3+1 STRAND FOLD TOPOLOGY, TWO EDGEWISE LOOPS AND DOUBLE-CHAIN REVERSAL LOOP, FORM 2 NATURAL, NMR, 10 STRUCTURES
Descriptor:HUMAN TELOMERE DNA
Authors:Kuryavyi, V.V., Phan, A.T., Luu, K.N., Patel, D.J.
Deposit date:2007-07-08
Release date:2008-07-15
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution.
Nucleic Acids Res., 35, 2007