3KO6
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7CKV
| Crystal structure of Cyanobacteriochrome GAF domain in Pr state | Descriptor: | MAGNESIUM ION, PHYCOCYANOBILIN, RcaE | Authors: | Nagae, T, Koizumi, T, Hirose, Y, Mishima, M. | Deposit date: | 2020-07-19 | Release date: | 2021-05-05 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.63 Å) | Cite: | Structural basis of the protochromic green/red photocycle of the chromatic acclimation sensor RcaE. Proc.Natl.Acad.Sci.USA, 118, 2021
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5ZOH
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1F5M
| STRUCTURE OF THE GAF DOMAIN | Descriptor: | BROMIDE ION, GAF | Authors: | Ho, Y.S, Burden, L.M, Hurley, J.H. | Deposit date: | 2000-06-15 | Release date: | 2000-11-10 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure of the GAF domain, a ubiquitous signaling motif and a new class of cyclic GMP receptor. EMBO J., 19, 2000
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8K9O
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8JRC
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5HL6
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1YKD
| Crystal Structure of the Tandem GAF Domains from a Cyanobacterial Adenylyl Cyclase: Novel Modes of Ligand-Binding and Dimerization | Descriptor: | ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, adenylate cyclase | Authors: | Martinez, S.E, Bruder, S, Schultz, A, Zheng, N, Schultz, J.E, Beavo, J.A, Linder, J.U. | Deposit date: | 2005-01-17 | Release date: | 2005-02-22 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of the tandem GAF domains from a cyanobacterial adenylyl cyclase: Modes of ligand binding and dimerization Proc.Natl.Acad.Sci.USA, 102, 2005
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6UVB
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3TRC
| Structure of the GAF domain from a phosphoenolpyruvate-protein phosphotransferase (ptsP) from Coxiella burnetii | Descriptor: | PHOSPHATE ION, Phosphoenolpyruvate-protein phosphotransferase, SODIUM ION | Authors: | Cheung, J, Franklin, M.C, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J. | Deposit date: | 2011-09-09 | Release date: | 2011-09-28 | Last modified: | 2017-11-08 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structural genomics for drug design against the pathogen Coxiella burnetii. Proteins, 83, 2015
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4BWI
| Structure of the phytochrome Cph2 from Synechocystis sp. PCC6803 | Descriptor: | FORMIC ACID, GLUTAMIC ACID, GLYCEROL, ... | Authors: | Anders, K, Angerer, V, Widany, G.D, Mroginski, M.A, von Stetten, D, Essen, L.-O. | Deposit date: | 2013-07-03 | Release date: | 2013-10-30 | Last modified: | 2019-05-08 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Structure of the Cyanobacterial Phytochrome 2 Photosensor Implies a Tryptophan Switch for Phytochrome Signaling. J.Biol.Chem., 288, 2013
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6UPP
| Radiation Damage Test of PixJ Pb state crystals | Descriptor: | 1,2-ETHANEDIOL, MAGNESIUM ION, Methyl-accepting chemotaxis protein, ... | Authors: | Clinger, J.A, Miller, M.D, Burgie, E.S, Vierstra, R.D, Phillips Jr, G.N. | Deposit date: | 2019-10-18 | Release date: | 2019-12-18 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (1.56 Å) | Cite: | Photoreversible interconversion of a phytochrome photosensory module in the crystalline state. Proc.Natl.Acad.Sci.USA, 117, 2020
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6UV8
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3VV4
| Crystal structure of cyanobacteriochrome TePixJ GAF domain | Descriptor: | Methyl-accepting chemotaxis protein, Phycoviolobilin, green light-absorbing form, ... | Authors: | Ishizuka, T, Narikawa, R, Muraki, N, Shiba, T, Kurisu, G, Ikeuchi, M. | Deposit date: | 2012-07-14 | Release date: | 2013-01-30 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism Proc.Natl.Acad.Sci.USA, 110, 2013
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3CI6
| Crystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferase | Descriptor: | 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... | Authors: | Cuff, M.E, Shackelford, G, Kim, Y, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) | Deposit date: | 2008-03-10 | Release date: | 2008-05-13 | Last modified: | 2024-10-09 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Crystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferase. TO BE PUBLISHED
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5W10
| Lcd1 GAF domain in complex with cAMP ligand | Descriptor: | ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, cGMP-specific phosphodiesterase | Authors: | Guzzo, C.R, Maciel, N.K, Barbosa, A.S, Farah, C.S. | Deposit date: | 2017-06-01 | Release date: | 2017-06-28 | Last modified: | 2020-01-01 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Structural and Enzymatic Characterization of a cAMP-Dependent Diguanylate Cyclase from Pathogenic Leptospira Species. J. Mol. Biol., 429, 2017
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3DBA
| Crystal structure of the cGMP-bound GAF a domain from the photoreceptor phosphodiesterase 6C | Descriptor: | Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', GLYCEROL, GUANOSINE-3',5'-MONOPHOSPHATE | Authors: | Martinez, S.E, Heikaus, C.C, Klevit, R.E, Beavo, J.A. | Deposit date: | 2008-05-30 | Release date: | 2008-07-01 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.57 Å) | Cite: | The Structure of the GAF A Domain from Phosphodiesterase 6C Reveals Determinants of cGMP Binding, a Conserved Binding Surface, and a Large cGMP-dependent Conformational Change. J.Biol.Chem., 283, 2008
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3W2Z
| Crystal structure of the cyanobacterial protein | Descriptor: | IODIDE ION, Methyl-accepting chemotaxis protein, PHYCOCYANOBILIN | Authors: | Narikawa, R, Muraki, N, Shiba, T, Kurisu, G, Ikeuchi, M. | Deposit date: | 2012-12-06 | Release date: | 2013-01-30 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism Proc.Natl.Acad.Sci.USA, 110, 2013
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2K31
| Solution Structure of cGMP-binding GAF domain of Phosphodiesterase 5 | Descriptor: | GUANOSINE-3',5'-MONOPHOSPHATE, Phosphodiesterase 5A, cGMP-specific | Authors: | Heikaus, C.C, Stout, J.R, Sekharan, M.R, Eakin, C.M, Rajagopal, P, Brzovic, P.S, Beavo, J.A, Klevit, R.E. | Deposit date: | 2008-04-16 | Release date: | 2008-06-03 | Last modified: | 2024-05-08 | Method: | SOLUTION NMR | Cite: | Solution Structure of the cGMP Binding GAF Domain from Phosphodiesterase 5: Insights into Nucleotide Selectivity, Dimerization, and cGMP-Dependent Conformational Change. J.Biol.Chem., 283, 2008
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2K2N
| Solution structure of a cyanobacterial phytochrome GAF domain in the red light-absorbing ground state | Descriptor: | PHYCOCYANOBILIN, Sensor protein | Authors: | Cornilescu, C.C, Cornilescu, G, Ulijasz, A.T, Vierstra, R.D, Markley, J.L. | Deposit date: | 2008-04-04 | Release date: | 2008-09-23 | Last modified: | 2022-03-16 | Method: | SOLUTION NMR | Cite: | Solution structure of a cyanobacterial phytochrome GAF domain in the red-light-absorbing ground state. J.Mol.Biol., 383, 2008
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2KLI
| Structural Basis for the Photoconversion of A Phytochrome to the Activated FAR-RED LIGHT-ABSORBING Form | Descriptor: | PHYCOCYANOBILIN, Sensor protein | Authors: | Cornilescu, C.C, Cornilescu, G, Ulijasz, A.T, Zhang, J, Rivera, M, Vierstra, R.D, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG) | Deposit date: | 2009-07-03 | Release date: | 2009-11-03 | Last modified: | 2022-03-16 | Method: | SOLUTION NMR | Cite: | Structural basis for the photoconversion of a phytochrome to the activated Pfr form Nature, 463, 2010
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2KOI
| Refined solution structure of a cyanobacterial phytochrome GAF domain in the red light-absorbing ground state | Descriptor: | PHYCOCYANOBILIN, Sensor protein | Authors: | Cornilescu, C.C, Cornilescu, G, Ulijasz, A.T, Vierstra, R.D, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG) | Deposit date: | 2009-09-22 | Release date: | 2009-11-03 | Last modified: | 2011-07-13 | Method: | SOLUTION NMR | Cite: | Structural basis for the photoconversion of a phytochrome to the activated Pfr form Nature, 463, 2010
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2Y79
| STRUCTURE OF THE FIRST GAF DOMAIN E87A MUTANT OF MYCOBACTERIUM TUBERCULOSIS DOSS | Descriptor: | CALCIUM ION, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ... | Authors: | Cho, H.Y, Cho, H.J, Kang, B.S. | Deposit date: | 2011-01-30 | Release date: | 2011-02-16 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Blockage of the Channel to Heme by the E87 Side Chain in the Gaf Domain of Mycobacterium Tuberculosis Doss Confers the Unique Sensitivity of Doss to Oxygen. FEBS Lett., 585, 2011
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4G3W
| Crystal structure of a. aeolicus nlh1 gaf domain in an inactive state | Descriptor: | Transcriptional regulator nlh1 | Authors: | Batchelor, J.D, Wang, A, Lee, P, Doucleff, M, Wemmer, D.E. | Deposit date: | 2012-07-15 | Release date: | 2013-05-29 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus J.Mol.Biol., 425, 2013
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4GLQ
| Crystal Structure of the blue-light absorbing form of the Thermosynechococcus elongatus PixJ GAF-domain | Descriptor: | Methyl-accepting chemotaxis protein, Phycoviolobilin, blue light-absorbing form | Authors: | Burgie, E.S, Walker, J.M, Phillips Jr, G.N, Vierstra, R.D. | Deposit date: | 2012-08-14 | Release date: | 2013-01-16 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.772 Å) | Cite: | A Photo-Labile Thioether Linkage to Phycoviolobilin Provides the Foundation for the Blue/Green Photocycles in DXCF-Cyanobacteriochromes. Structure, 21, 2013
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