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4W8I
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Crystal structure of LpSPL/Lpp2128, Legionella pneumophila sphingosine-1 phosphate lyase
分子名称: Probable sphingosine-1-phosphate lyase
著者Stogios, P.J, Daniels, C, Skarina, T, Cuff, M, Di Leo, R, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-08-24
公開日2014-11-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Legionella pneumophila S1P-lyase targets host sphingolipid metabolism and restrains autophagy.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K1R
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Structure of Burkholderia pseudomallei K96243 sphingosine-1-phosphate lyase Bpss2021
分子名称: Burkholderia pseudomallei sphingosine-1-phosphate lyase Bpss2021, PYRIDOXAL-5'-PHOSPHATE
著者Mclean, C.J, Campopiano, D.J, Marles-Wright, J.
登録日2016-05-18
公開日2016-11-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.104 Å)
主引用文献Characterization of homologous sphingosine-1-phosphate lyase isoforms in the bacterial pathogen Burkholderia pseudomallei.
J. Lipid Res., 58, 2017
5O5C
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BU of 5o5c by Molmil
The crystal structure of DfoJ, the desferrioxamine biosynthetic pathway lysine decarboxylase from the fire blight disease pathogen Erwinia amylovora
分子名称: PYRIDOXAL-5'-PHOSPHATE, Putative decarboxylase involved in desferrioxamine biosynthesis
著者Salomone-Stagni, M, Bartho, J.D, Polsinelli, I, Bellini, D, Walsh, M.A, Demitri, N, Benini, S.
登録日2017-06-01
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A complete structural characterization of the desferrioxamine E biosynthetic pathway from the fire blight pathogen Erwinia amylovora.
J. Struct. Biol., 202, 2018
4E1O
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Human histidine decarboxylase complex with Histidine methyl ester (HME)
分子名称: HISTIDINE-METHYL-ESTER, Histidine decarboxylase, PYRIDOXAL-5'-PHOSPHATE
著者Komori, H, Nitta, Y, Ueno, H, Higuchi, Y.
登録日2012-03-06
公開日2012-07-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural study reveals that Ser-354 determines substrate specificity on human histidine decarboxylase
J.Biol.Chem., 287, 2012
2JIS
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Human cysteine sulfinic acid decarboxylase (CSAD) in complex with PLP.
分子名称: CYSTEINE SULFINIC ACID DECARBOXYLASE, NITRATE ION, PYRIDOXAL-5'-PHOSPHATE
著者Collins, R, Moche, M, Arrowsmith, C, Berglund, H, Busam, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Nordlund, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Tresaugues, L, van den Berg, S, Weigelt, J, Welin, M, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
登録日2007-06-30
公開日2007-08-28
最終更新日2015-04-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Crystal Structure of Human Cysteine Sulfinic Acid Decarboxylase (Csad)
To be Published
1XEY
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BU of 1xey by Molmil
Crystal structure of the complex of Escherichia coli GADA with glutarate at 2.05 A resolution
分子名称: ACETATE ION, GLUTARIC ACID, Glutamate decarboxylase alpha, ...
著者Dutyshev, D.I, Darii, E.L, Fomenkova, N.P, Pechik, I.V, Polyakov, K.M, Nikonov, S.V, Andreeva, N.S, Sukhareva, B.S.
登録日2004-09-13
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of Escherichia coli glutamate decarboxylase (GADalpha) in complex with glutarate at 2.05 angstroms resolution.
Acta Crystallogr.,Sect.D, 61, 2005
3F9T
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Crystal structure of L-tyrosine decarboxylase MfnA (EC 4.1.1.25) (NP_247014.1) from METHANOCOCCUS JANNASCHII at 2.11 A resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, L-tyrosine decarboxylase MfnA, PYRIDOXAL-5'-PHOSPHATE
著者Joint Center for Structural Genomics (JCSG)
登録日2008-11-14
公開日2008-11-25
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Crystal structure of L-tyrosine decarboxylase MfnA (EC 4.1.1.25) (NP_247014.1) from METHANOCOCCUS JANNASCHII at 2.11 A resolution
To be published
8AYF
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Crystal structure of human Sphingosine-1-phosphate lyase 1
分子名称: ACETATE ION, GLYCEROL, Sphingosine-1-phosphate lyase 1
著者Giardina, G, Catalano, F, Pampalone, G, Cellini, B.
登録日2022-09-02
公開日2023-09-13
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Dual species sphingosine-1-phosphate lyase inhibitors to combine antifungal and anti-inflammatory activities in cystic fibrosis: a feasibility study.
Sci Rep, 13, 2023
8CMX
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Structure of sphingosine-1-phosphate lyase (SPL) from Aspergillus fumigatus
分子名称: Sphinganine-1-phosphate aldolase BST1, putative
著者Catalano, F, Pampalone, G.
登録日2023-02-21
公開日2024-01-03
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献Dual species sphingosine-1-phosphate lyase inhibitors to combine antifungal and anti-inflammatory activities in cystic fibrosis: a feasibility study.
Sci Rep, 13, 2023
8OR9
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BU of 8or9 by Molmil
Human holo aromatic L-amino acid decarboxylase (AADC) native structure at physiological pH
分子名称: Dopa decarboxylase (Aromatic L-amino acid decarboxylase), PYRIDOXAL-5'-PHOSPHATE, TETRAETHYLENE GLYCOL
著者Bisello, G, Perduca, M, Bertoldi, M.
登録日2023-04-13
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Human aromatic amino acid decarboxylase is an asymmetric and flexible enzyme: Implication in aromatic amino acid decarboxylase deficiency.
Protein Sci., 32, 2023
8ORA
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Human holo aromatic L-amino acid decarboxylase (AADC) external aldimine with L-Dopa methylester
分子名称: Dopa decarboxylase (Aromatic L-amino acid decarboxylase), PYRIDOXAL-5'-PHOSPHATE, TETRAETHYLENE GLYCOL, ...
著者Bisello, G, Perduca, M, Bertoldi, M.
登録日2023-04-13
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Human aromatic amino acid decarboxylase is an asymmetric and flexible enzyme: Implication in aromatic amino acid decarboxylase deficiency.
Protein Sci., 32, 2023
6ZEK
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BU of 6zek by Molmil
Crystal structure of mouse CSAD
分子名称: CHLORIDE ION, COBALT (II) ION, Cysteine sulfinic acid decarboxylase, ...
著者Mahootchi, E, Raasakka, A, Haavik, J, Kursula, P.
登録日2020-06-16
公開日2021-04-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and substrate specificity determinants of the taurine biosynthetic enzyme cysteine sulphinic acid decarboxylase.
J.Struct.Biol., 213, 2021
1JS3
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Crystal structure of dopa decarboxylase in complex with the inhibitor carbidopa
分子名称: CARBIDOPA, DOPA decarboxylase, PYRIDOXAL-5'-PHOSPHATE, ...
著者Burkhard, P, Dominici, P, Borri-Voltattorni, C, Jansonius, J.N, Malashkevich, V.N.
登録日2001-08-16
公開日2001-10-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural insight into Parkinson's disease treatment from drug-inhibited DOPA decarboxylase.
Nat.Struct.Biol., 8, 2001
1PMM
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Crystal structure of Escherichia coli GadB (low pH)
分子名称: ACETIC ACID, Glutamate decarboxylase beta, PYRIDOXAL-5'-PHOSPHATE
著者Capitani, G, De Biase, D, Aurizi, C, Gut, H, Bossa, F, Grutter, M.G.
登録日2003-06-11
公開日2004-02-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and functional analysis of escherichia coli glutamate decarboxylase
Embo J., 22, 2003
1PMO
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Crystal structure of Escherichia coli GadB (neutral pH)
分子名称: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glutamate decarboxylase beta
著者Capitani, G, De Biase, D, Aurizi, C, Gut, H, Bossa, F, Grutter, M.G.
登録日2003-06-11
公開日2004-02-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure and functional analysis of escherichia coli glutamate decarboxylase
Embo J., 22, 2003
1JS6
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Crystal Structure of DOPA decarboxylase
分子名称: DOPA decarboxylase, PYRIDOXAL-5'-PHOSPHATE
著者Burkhard, P, Dominici, P, Borri-Voltattorni, C, Jansonius, J.N, Malashkevich, V.N.
登録日2001-08-16
公開日2001-10-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insight into Parkinson's disease treatment from drug-inhibited DOPA decarboxylase.
Nat.Struct.Biol., 8, 2001
7A0A
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BU of 7a0a by Molmil
Crystal structure of mouse CSAD in apo form
分子名称: Cysteine sulfinic acid decarboxylase, SODIUM ION, SULFATE ION
著者Mahootchi, E, Raasakka, A, Haavik, J, Kursula, P.
登録日2020-08-07
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structure of cysteine sulphinic acid decarboxylase reveals structural determinants for substrate specificity of pyridoxal phosphate-dependent decarboxylases
To be published
4OBV
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BU of 4obv by Molmil
Ruminococcus gnavus tryptophan decarboxylase RUMGNA_01526 (alpha-FMT)
分子名称: Pyridoxal-dependent decarboxylase domain protein, alpha-(fluoromethyl)-D-tryptophan, {5-hydroxy-4-[(1E)-4-(1H-indol-3-yl)-3-oxobut-1-en-1-yl]-6-methylpyridin-3-yl}methyl dihydrogen phosphate
著者Fraser, J.S, Van Benschoten, A.H.
登録日2014-01-07
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Discovery and Characterization of Gut Microbiota Decarboxylases that Can Produce the Neurotransmitter Tryptamine.
Cell Host Microbe, 16, 2014
5EUE
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S1P Lyase Bacterial Surrogate bound to N-(2-((4-methoxy-2,5-dimethylbenzyl)amino)-1-phenylethyl)-5-methylisoxazole-3-carboxamide
分子名称: PHOSPHATE ION, Putative sphingosine-1-phosphate lyase, ~{N}-[(1~{S})-2-[(4-methoxy-2,5-dimethyl-phenyl)methylamino]-1-phenyl-ethyl]-5-methyl-1,2-oxazole-3-carboxamide
著者Argiriadi, M.A, Banach, D, Radziejewska, E, Marchie, S, DiMauro, J, Dinges, J, Dominguez, E, Hutchins, C, Judge, R.A, Queeney, K, Wallace, G, Harris, C.M.
登録日2015-11-18
公開日2016-03-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Creation of a S1P Lyase bacterial surrogate for structure-based drug design.
Bioorg.Med.Chem.Lett., 26, 2016
5EUD
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S1P Lyase Bacterial Surrogate bound to N-(1-(4-(3-hydroxyprop-1-yn-1-yl)phenyl)-2-((4-methoxy-2,5-dimethylbenzyl)amino)ethyl)-5-methylisoxazole-3-carboxamide
分子名称: PHOSPHATE ION, Putative sphingosine-1-phosphate lyase, ~{N}-[(1~{S})-2-[(4-methoxy-2,5-dimethyl-phenyl)methylamino]-1-[4-(3-oxidanylprop-1-ynyl)phenyl]ethyl]-5-methyl-1,2-oxazole-3-carboxamide
著者Argiriadi, M.A, Banach, D, Radziejewska, E, Marchie, S, DiMauro, J, Dinges, J, Dominguez, E, Hutchins, C, Judge, R.A, Queeney, K, Wallace, G, Harris, C.M.
登録日2015-11-18
公開日2016-03-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Creation of a S1P Lyase bacterial surrogate for structure-based drug design.
Bioorg.Med.Chem.Lett., 26, 2016
4OBU
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BU of 4obu by Molmil
Ruminococcus gnavus tryptophan decarboxylase RUMGNA_01526 (apo)
分子名称: PYRIDOXAL-5'-PHOSPHATE, Pyridoxal-dependent decarboxylase domain protein
著者Van Benschoten, A.H, Fraser, J.S.
登録日2014-01-07
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Discovery and Characterization of Gut Microbiota Decarboxylases that Can Produce the Neurotransmitter Tryptamine.
Cell Host Microbe, 16, 2014
3RBL
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BU of 3rbl by Molmil
Crystal structure of Human aromatic L-amino acid decarboxylase (AADC) in the apo form
分子名称: CHLORIDE ION, aromatic L-amino acid decarboxylase
著者Giardina, G, Montioli, R, Gianni, S, Cellini, B, Paiardini, A, Borri Voltattorni, C, Cutruzzola, F.
登録日2011-03-29
公開日2011-10-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Open conformation of human DOPA decarboxylase reveals the mechanism of PLP addition to Group II decarboxylases.
Proc.Natl.Acad.Sci.USA, 108, 2011
3RCH
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Crystal structure of Human aromatic L-amino acid decarboxylase (AADC) in the open conformation with LLP and PLP bound to Chain-A and Chain-B respectively
分子名称: PYRIDOXAL-5'-PHOSPHATE, aromatic L-amino acid decarboxylase
著者Giardina, G, Montioli, R, Gianni, S, Cellini, B, Paiardini, A, Borri Voltattorni, C, Cutruzzola, F.
登録日2011-03-31
公開日2011-10-19
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Open conformation of human DOPA decarboxylase reveals the mechanism of PLP addition to Group II decarboxylases.
Proc.Natl.Acad.Sci.USA, 108, 2011
7ERU
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BU of 7eru by Molmil
Crystal structure of L-histidine decarboxylase (C57S mutant) from Photobacterium phosphoreum
分子名称: Histidine decarboxylase
著者Oda, Y, Nakata, K, Yamaguchi, H, Kashiwagi, T, Miyano, H, Mizukoshi, T.
登録日2021-05-07
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural insights into the enhanced thermostability of cysteine substitution mutants of L-histidine decarboxylase from Photobacterium phosphoreum.
J.Biochem., 171, 2022
7ERV
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Crystal structure of L-histidine decarboxylase (C57S/C101V/C282V mutant) from Photobacterium phosphoreum
分子名称: Histidine decarboxylase, IMIDAZOLE
著者Oda, Y, Nakata, K, Yamaguchi, H, Kashiwagi, T, Miyano, H, Mizukoshi, T.
登録日2021-05-07
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into the enhanced thermostability of cysteine substitution mutants of L-histidine decarboxylase from Photobacterium phosphoreum.
J.Biochem., 171, 2022

 

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