Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8DSN
DownloadVisualize
BU of 8dsn by Molmil
Peptidylglycine alpha hydroxylating monoxygenase, Q272A
Descriptor: COPPER (II) ION, GLYCEROL, Peptidylglycine alpha-amidating monooxygenase
Authors:Arias, R.J, Blackburn, N.J.
Deposit date:2022-07-22
Release date:2023-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:New structures reveal flexible dynamics between the subdomains of peptidylglycine monooxygenase. Implications for an open to closed mechanism.
Protein Sci., 32, 2023
5JLH
DownloadVisualize
BU of 5jlh by Molmil
Cryo-EM structure of a human cytoplasmic actomyosin complex at near-atomic resolution
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 2, ...
Authors:von der Ecken, J, Heissler, S.M, Pathan-Chhatbar, S, Manstein, D.J, Raunser, S.
Deposit date:2016-04-27
Release date:2016-06-15
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of a human cytoplasmic actomyosin complex at near-atomic resolution.
Nature, 534, 2016
4HZM
DownloadVisualize
BU of 4hzm by Molmil
Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-hexosaminidase, N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide
Authors:Bacik, J.P, Mark, B.L.
Deposit date:2012-11-15
Release date:2013-06-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Development of Selective Inhibitors of NagZ: Increased Susceptibility of Gram-Negative Bacteria to beta-Lactams.
Chembiochem, 14, 2013
7QZO
DownloadVisualize
BU of 7qzo by Molmil
Crystal structure of GacS D1 domain
Descriptor: CADMIUM ION, GLYCEROL, Histidine kinase
Authors:Fadel, F, Bassim, V, Botzanowski, T, Francis, V.I, Legrand, P, Porter, S.L, Bourne, Y, Cianferani, S, Vincent, F.
Deposit date:2022-01-31
Release date:2022-07-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Insights into the atypical autokinase activity of the Pseudomonas aeruginosa GacS histidine kinase and its interaction with RetS.
Structure, 30, 2022
3EHT
DownloadVisualize
BU of 3eht by Molmil
Crystal structure of the extracellular domain of human corticotropin releasing factor receptor type 1 (CRFR1) in complex with CRF
Descriptor: Corticoliberin, FUSION PROTEIN OF CRFR1 EXTRACELLULAR DOMAIN AND MBP, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Pioszak, A.A, Xu, H.E.
Deposit date:2008-09-14
Release date:2008-09-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Molecular Recognition of Corticotropin-releasing Factor by Its G-protein-coupled Receptor CRFR1.
J.Biol.Chem., 283, 2008
2ROG
DownloadVisualize
BU of 2rog by Molmil
Solution structure of Thermus thermophilus HB8 TTHA1718 protein in living E. coli cells
Descriptor: Heavy metal binding protein
Authors:Sakakibara, D, Sasaki, A, Ikeya, T, Hamatsu, J, Koyama, H, Mishima, M, Mikawa, T, Waelchli, M, Smith, B.O, Shirakawa, M, Guentert, P, Ito, Y.
Deposit date:2008-03-21
Release date:2009-03-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Protein structure determination in living cells by in-cell NMR spectroscopy
Nature, 458, 2009
8DSL
DownloadVisualize
BU of 8dsl by Molmil
Peptidylglycine alpha hydroxylating monooxygenase, Q272E
Descriptor: COPPER (II) ION, GLYCEROL, Peptidylglycine alpha-amidating monooxygenase
Authors:Arias, R.J, Blackburn, N.J.
Deposit date:2022-07-22
Release date:2023-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:New structures reveal flexible dynamics between the subdomains of peptidylglycine monooxygenase. Implications for an open to closed mechanism.
Protein Sci., 32, 2023
7QZ2
DownloadVisualize
BU of 7qz2 by Molmil
Crystal structure of GacS D1 domain in complex with BeF3-
Descriptor: BERYLLIUM TRIFLUORIDE ION, CADMIUM ION, Histidine kinase, ...
Authors:Fadel, F, Bassim, V, Botzanowski, T, Francis, V.I, Legrand, P, Porter, S.L, Bourne, Y, Cianferani, S, Vincent, F.
Deposit date:2022-01-30
Release date:2022-07-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Insights into the atypical autokinase activity of the Pseudomonas aeruginosa GacS histidine kinase and its interaction with RetS.
Structure, 30, 2022
5G06
DownloadVisualize
BU of 5g06 by Molmil
Cryo-EM structure of yeast cytoplasmic exosome
Descriptor: EXOSOME COMPLEX COMPONENT CSL4, EXOSOME COMPLEX COMPONENT MTR3, EXOSOME COMPLEX COMPONENT RRP4, ...
Authors:Liu, J.J, Niu, C.Y, Wu, Y, Tan, D, Wang, Y, Ye, M.D, Liu, Y, Zhao, W.W, Zhou, K, Liu, Q.S, Dai, J.B, Yang, X.R, Dong, M.Q, Huang, N, Wang, H.W.
Deposit date:2016-03-17
Release date:2016-06-15
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryoem Structure of Yeast Cytoplasmic Exosome Complex.
Cell Res., 26, 2016
5JC7
DownloadVisualize
BU of 5jc7 by Molmil
Crystal structure of chicken MDA5 with 5'p 24-mer dsRNA and ADP-Mg2+ at 2.75 A resolution.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Melanoma differentiation associated protein-5, ...
Authors:Cusack, S, Uchikawa, E.
Deposit date:2016-04-14
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural Analysis of dsRNA Binding to Anti-viral Pattern Recognition Receptors LGP2 and MDA5.
Mol.Cell, 62, 2016
5FPY
DownloadVisualize
BU of 5fpy by Molmil
Structure of hepatitis C virus (HCV) full-length NS3 complex with small-molecule ligand 5-bromo-1-methyl-1H-indole-2-carboxylic acid (AT21457) in an alternate binding site.
Descriptor: 5-bromo-1-methyl-1H-indole-2-carboxylic acid, SERINE PROTEASE NS3
Authors:Davies, T.G, Jhoti, H, Ludlow, R.F, Saini, H.K, Tickle, I.J, Verdonk, M.
Deposit date:2015-12-03
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Detection of Secondary Binding Sites in Proteins Using Fragment Screening.
Proc.Natl.Acad.Sci.USA, 112, 2015
5FPD
DownloadVisualize
BU of 5fpd by Molmil
Structure of heat shock-related 70kDA protein 2 with small-molecule ligand pyrazine-2-carboxamide (AT513) in an alternate binding site.
Descriptor: HEAT SHOCK-RELATED 70KDA PROTEIN 2, PYRAZINE-2-CARBOXAMIDE
Authors:Jhoti, H, Ludlow, R.F, Patel, S, Saini, H.K, Tickle, I.J, Verdonk, M.
Deposit date:2015-11-28
Release date:2015-12-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Detection of Secondary Binding Sites in Proteins Using Fragment Screening.
Proc.Natl.Acad.Sci.USA, 112, 2015
1A1W
DownloadVisualize
BU of 1a1w by Molmil
FADD DEATH EFFECTOR DOMAIN, F25Y MUTANT, NMR MINIMIZED AVERAGE STRUCTURE
Descriptor: FADD PROTEIN
Authors:Eberstadt, M, Huang, B, Chen, Z, Meadows, R.P, Ng, C, Fesik, S.W.
Deposit date:1997-12-18
Release date:1998-12-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure and mutagenesis of the FADD (Mort1) death-effector domain.
Nature, 392, 1998
5JDT
DownloadVisualize
BU of 5jdt by Molmil
Structure of Spin-labelled T4 lysozyme mutant L118C-R1 at 100K
Descriptor: AZIDE ION, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Loll, B, Consentius, P, Gohlke, U, Mueller, R, Kaupp, M, Heinemann, U, Wahl, M.C, Risse, T.
Deposit date:2016-04-17
Release date:2016-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1 Å)
Cite:Tracking Transient Conformational States of T4 Lysozyme at Room Temperature Combining X-ray Crystallography and Site-Directed Spin Labeling.
J.Am.Chem.Soc., 138, 2016
7M3T
DownloadVisualize
BU of 7m3t by Molmil
Crystallographic structure of a cubic crystal of STMV (80.7 degree rotation about 111) grown from chloride
Descriptor: CHLORIDE ION, Coat protein, MAGNESIUM ION, ...
Authors:McPherson, A.
Deposit date:2021-03-19
Release date:2021-12-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of additional crystal forms of Satellite tobacco mosaic virus grown from a variety of salts.
Acta Crystallogr.,Sect.F, 77, 2021
1AO0
DownloadVisualize
BU of 1ao0 by Molmil
GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE FROM B. SUBTILIS COMPLEXED WITH ADP AND GMP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Tomchick, D.R, Smith, J.L.
Deposit date:1997-07-15
Release date:1997-11-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanism of the synergistic end-product regulation of Bacillus subtilis glutamine phosphoribosylpyrophosphate amidotransferase by nucleotides.
Biochemistry, 36, 1997
5FBI
DownloadVisualize
BU of 5fbi by Molmil
COMPLEMENT FACTOR D IN COMPLEX WITH COMPOUND 3b
Descriptor: 3-[(2-aminocarbonyl-1~{H}-indol-5-yl)oxymethyl]benzoic acid, Complement factor D, GLYCEROL
Authors:Ostermann, N, Zink, F.
Deposit date:2015-12-14
Release date:2016-10-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Small-molecule factor D inhibitors targeting the alternative complement pathway.
Nat.Chem.Biol., 12, 2016
1ALG
DownloadVisualize
BU of 1alg by Molmil
SOLUTION STRUCTURE OF AN HGR INHIBITOR, NMR, 10 STRUCTURES
Descriptor: P11
Authors:Schott, M.K, Nordhoff, A, Becker, K, Kalbitzer, H.R, Schirmer, R.H.
Deposit date:1997-06-03
Release date:1997-10-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Denaturation and reactivation of dimeric human glutathione reductase--an assay for folding inhibitors.
Eur.J.Biochem., 245, 1997
1OXX
DownloadVisualize
BU of 1oxx by Molmil
Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
Descriptor: ABC transporter, ATP binding protein, IODIDE ION
Authors:Verdon, G, Albers, S.-V, van Oosterwijk, N, Dijkstra, B.W, Driessen, A.J.M, Thunnissen, A.M.W.H.
Deposit date:2003-04-03
Release date:2003-09-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Formation of the productive ATP-Mg2+-bound dimer of GlcV, an ABC-ATPase from Sulfolobus solfataricus
J.Mol.Biol., 334, 2003
6X7I
DownloadVisualize
BU of 6x7i by Molmil
Structure of the C-terminal domain of BCL-XL in membrane
Descriptor: Bcl-2-like protein 1
Authors:Yao, Y, Tian, Y, Marassi, F.M.
Deposit date:2020-05-30
Release date:2020-07-01
Last modified:2024-05-15
Method:SOLID-STATE NMR, SOLUTION NMR
Cite:Conformational States of the Cytoprotective Protein Bcl-xL.
Biophys.J., 119, 2020
1J8I
DownloadVisualize
BU of 1j8i by Molmil
Solution Structure of Human Lymphotactin
Descriptor: Lymphotactin
Authors:Kuloglu, E.S, McCaslin, D.R, Markley, J.L, Pauza, C.D, Volkman, B.F.
Deposit date:2001-05-21
Release date:2001-10-24
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Monomeric solution structure of the prototypical 'C' chemokine lymphotactin.
Biochemistry, 40, 2001
1AV1
DownloadVisualize
BU of 1av1 by Molmil
CRYSTAL STRUCTURE OF HUMAN APOLIPOPROTEIN A-I
Descriptor: APOLIPOPROTEIN A-I
Authors:Borhani, D.W, Rogers, D.P, Engler, J.A, Brouillette, C.G.
Deposit date:1997-09-23
Release date:1998-02-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (4 Å)
Cite:Crystal structure of truncated human apolipoprotein A-I suggests a lipid-bound conformation.
Proc.Natl.Acad.Sci.USA, 94, 1997
1AY1
DownloadVisualize
BU of 1ay1 by Molmil
ANTI TAQ FAB TP7
Descriptor: TP7 FAB
Authors:Murali, R, Helmer-Citterich, M, Sharkey, D.J, Scalice, E.R, Daiss, J.L, Sullivan, M.A, Murthy, H.M.K.
Deposit date:1997-11-13
Release date:1998-05-13
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural studies on an inhibitory antibody against Thermus aquaticus DNA polymerase suggest mode of inhibition.
Protein Eng., 11, 1998
1IE1
DownloadVisualize
BU of 1ie1 by Molmil
NMR Solution Structure of an In Vitro Selected RNA which is Sequence Specifically Recognized by Hamster Nucleolin RBD12.
Descriptor: 5'-R(*GP*GP*CP*CP*GP*AP*AP*AP*UP*CP*CP*CP*GP*AP*AP*GP*UP*AP*GP*GP*CP*C)-3'
Authors:Bouvet, P, Allain, F.H.-T, Finger, L.D, Dieckmann, T, Feigon, J.
Deposit date:2001-04-05
Release date:2001-06-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Recognition of pre-formed and flexible elements of an RNA stem-loop by nucleolin.
J.Mol.Biol., 309, 2001
5JEA
DownloadVisualize
BU of 5jea by Molmil
Structure of a cytoplasmic 11-subunit RNA exosome complex including Ski7, bound to RNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Exosome complex component CSL4, Exosome complex component MTR3, ...
Authors:Kowalinski, E, Ebert, J, Stegmann, E, Conti, E.
Deposit date:2016-04-18
Release date:2016-07-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of a Cytoplasmic 11-Subunit RNA Exosome Complex.
Mol.Cell, 63, 2016

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon